PRGDB00047425 (OSJNAa0079B05.26)
| OSJNAa0079B05.26 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 19848323 (AC116601) |
| Gene Class | RLP |
| Domain Type | LRR, LRR, LRR, Ser-Thr Kinase, Receptor-Like Kinase |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGCACTTCTTCGCTGGAAGTCCACTCTCAGGATCTCATCAGTGCATATGAGCTCCTGGAAGAACACCACAAGCCTCTGCAACTGGACAGGGATCATGTGTAGTCGTAGTGTCATCCGCCATGGACGACGACACCGTCTGCCATGGCCAGTGGTGACCAACATCTCCCTTCCAGCTTCTGGCATCCATGGCCAGCTTCGTGAGCTTGACTTCTCATCTCTACCATATCTCACATATATTGATCTCAGCAAAAACAGTCTCTCTGGTCCAATACCCTCAAATATCAACTCTCTGTCAGCTCTTGTGCACCTTGAACTTCAATTGAACCTGCTCACAGGAAGAATACCAGATGAGATTGGTGAACTACGAAGTCTCACCACACTATCCCTTTCCTTTAACAACCTCACCGGACACATCCCTGCTTCCTTGGGGAATCTAACGATGGTAACCACATTTTTCGTACACCAAAATATGATCTCCAGTTTCATCCCAAAGGAAATAGGACTGCTAGCTAACCTGCAGAGTTTAAGTCTAAGCAACAACACATTGACCGGAGAGATACCCAGAACTCTAGCAAATCTAACCAACCTAGCTACTTTGCAACTATATGGTAATGAACTGTCAGGGCCTATACCCCAAAAACTTTGCATGCTCACGAAGATCCAATATCTTGAACTTAGCGGTAATAAACTTACTGGTGAACTTCCTTCATGTTTATCCAATCTAACAAAGATGAAAGAACTTTACCTACACCAAAACCAAATCACGGGTTCCATCCCAAAAGAGATAGGAATGCTTGCTAACCTGCAACTTTTAAGTTTAGGCAATAATACCTTTAGCGGCGAGATACCCACAACTCTAGCAAATCTGACCAACCTAGCTACTTTGTACCTATGGGGTAATGAACTTTCGGGGCCTATACCCCAAAAACTCTGCATGCTCACCAAGATGCAATACCTTGGTCTTAACAGTAACAAACTTACTAGCGAAATCCCTGCATGTTTATCCGATCTAACGAAAATGGAAAAACTTTACCTATACCAAAACCAAATCACAGGTTCCATCCCAAAAGAGATAGGAATGCTTGCTAACCTGCATCTTTTAAATGTAGGCAACAATGCCTTTAGCGGCGAGATACCCATAACTCTATCAAATCTGACCAACCTAGCTACTTTGTACCTATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Putative disease resistance protein Hcr2-0B | Putative disease resistance protein Hcr2-0B [Oryza sativa (japonica cultivar-group)]. | MALLRWKSTLRISSVHMSSWKNTTSLCNWTGIMCSRSVIRHGRRHRLPWPVVTNISLPASGIHGQLRELDFSSLPYLTYIDLSKNSLSGPIPSNINSLSALVHLELQLNLLTGRIPDEIGELRSLTTLSLSFNNLTGHIPASLGNLTMVTTFFVHQNMISSFIPKEIGLLANLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELSGPIPQKLCMLTKIQYLELSGNKLTGELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELSGPIPQKLCMLTKMQYLGLNSNKLTSEIPACLSDLTKMEKLYLYQNQITGSIPKEIGMLANLHLLNVGNNAFSGEIPITLSNLTNLATLYL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-394 | FAMILY NOT NAMED,FAMILY NOT NAMED | MALLRWKSTLRISSVHMSSWKNTTSLCNWTGIMCSRSVIRHGRRHRLPWPVVTNISLPASGIHGQLRELDFSSLPYLTYIDLSKNSLSGPIPSNINSLSALVHLELQLNLLTGRIPDEIGELRSLTTLSLSFNNLTGHIPASLGNLTMVTTFFVHQNMISSFIPKEIGLLANLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELSGPIPQKLCMLTKIQYLELSGNKLTGELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELSGPIPQKLCMLTKMQYLGLNSNKLTSEIPACLSDLTKMEKLYLYQNQITGSIPKEIGMLANLHLLNVGNNAFSGEIPITLSNLTNLATLYL |
| HMMPanther: PTHR24420:SF472 | 1-394 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MALLRWKSTLRISSVHMSSWKNTTSLCNWTGIMCSRSVIRHGRRHRLPWPVVTNISLPASGIHGQLRELDFSSLPYLTYIDLSKNSLSGPIPSNINSLSALVHLELQLNLLTGRIPDEIGELRSLTTLSLSFNNLTGHIPASLGNLTMVTTFFVHQNMISSFIPKEIGLLANLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELSGPIPQKLCMLTKIQYLELSGNKLTGELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELSGPIPQKLCMLTKMQYLGLNSNKLTSEIPACLSDLTKMEKLYLYQNQITGSIPKEIGMLANLHLLNVGNNAFSGEIPITLSNLTNLATLYL |
| Gene3D: G3DSA:3.80.10.10 | 2-225 | no description | ALLRWKSTLRISSVHMSSWKNTTSLCNWTGIMCSRSVIRHGRRHRLPWPVVTNISLPASGIHGQLRELDFSSLPYLTYIDLSKNSLSGPIPSNINSLSALVHLELQLNLLTGRIPDEIGELRSLTTLSLSFNNLTGHIPASLGNLTMVTTFFVHQNMISSFIPKEIGLLANLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELSGPIPQKLCMLTKIQYLE |
| HMMPfam: PF08263 IPR013210
|
2-35 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
ALLRWKSTLRISSVHMSSWKNTTSLCNWTGIMCS |
| superfamily: SSF52047 | 54-394 | RNI-like,LRR | NISLPASGIHGQLRELDFSSLPYLTYIDLSKNSLSGPIPSNINSLSALVHLELQLNLLTGRIPDEIGELRSLTTLSLSFNNLTGHIPASLGNLTMVTTFFVHQNMISSFIPKEIGLLANLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELSGPIPQKLCMLTKIQYLELSGNKLTGELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELSGPIPQKLCMLTKMQYLGLNSNKLTSEIPACLSDLTKMEKLYLYQNQITGSIPKEIGMLANLHLLNVGNNAFSGEIPITLSNLTNLATLYL |
| HMMSmart: SM00365 | 74-97 | Leucine-rich repeat, SDS22-like subfamily | LPYLTYIDLSKNSLSGPIPSNINS |
| FPrintScan: PR00019 | 77-90 | LEURICHRPT,Leucine-rich repeat signature | LTYIDLSKNSLSGP |
| HMMPfam: PF00560 IPR001611
|
77-98 | LRR_1 Leucine-rich repeat
|
LTYIDLSKNSLSGPIPSNINSL |
| HMMSmart: SM00369 IPR003591
|
122-146 | Leucine-rich repeats, typical (most populate Leucine-rich repeat, typical subtype
|
LRSLTTLSLSFNNLTGHIPASLGNL |
| Seg: seg | 122-136 | seg | LRSLTTLSLSFNNLT |
| HMMPfam: PF00560 IPR001611
|
124-146 | LRR_1 Leucine-rich repeat
|
SLTTLSLSFNNLTGHIPASLGNL |
| HMMSmart: SM00365 | 146-167 | Leucine-rich repeat, SDS22-like subfamily | LTMVTTFFVHQNMISSFIPKEI |
| Seg: seg | 169-183 | seg | LLANLQSLSLSNNTL |
| HMMSmart: SM00369 IPR003591
|
170-194 | Leucine-rich repeats, typical (most populate Leucine-rich repeat, typical subtype
|
LANLQSLSLSNNTLTGEIPRTLANL |
| HMMSmart: SM00365 | 170-196 | Leucine-rich repeat, SDS22-like subfamily | LANLQSLSLSNNTLTGEIPRTLANLTN |
| FPrintScan: PR00019 | 170-183 | LEURICHRPT,Leucine-rich repeat signature | LANLQSLSLSNNTL |
| HMMPfam: PF12799 | 172-208 | LRR_4,Leucine Rich repeats (2 copies) | NLQSLSLSNNTLTGEIPRTLANLTNLATLQLYGNELS |
| Seg: seg | 190-200 | seg | TLANLTNLATL |
| HMMSmart: SM00365 | 218-244 | Leucine-rich repeat, SDS22-like subfamily | LTKIQYLELSGNKLTGELPSCLSNLTK |
| HMMSmart: SM00369 IPR003591
|
218-241 | Leucine-rich repeats, typical (most populate Leucine-rich repeat, typical subtype
|
LTKIQYLELSGNKLTGELPSCLSN |
| HMMPfam: PF12799 | 219-256 | LRR_4,Leucine Rich repeats (2 copies) | TKIQYLELSGNKLTGELPSCLSNLTKMKELYLHQNQIT |
| Gene3D: G3DSA:3.80.10.10 | 226-394 | no description | LSGNKLTGELPSCLSNLTKMKELYLHQNQITGSIPKEIGMLANLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELSGPIPQKLCMLTKMQYLGLNSNKLTSEIPACLSDLTKMEKLYLYQNQITGSIPKEIGMLANLHLLNVGNNAFSGEIPITLSNLTNLATLYL |
| HMMSmart: SM00369 IPR003591
|
242-266 | Leucine-rich repeats, typical (most populate Leucine-rich repeat, typical subtype
|
LTKMKELYLHQNQITGSIPKEIGML |
| HMMSmart: SM00365 | 266-292 | Leucine-rich repeat, SDS22-like subfamily | LANLQLLSLGNNTFSGEIPTTLANLTN |
| HMMPfam: PF12799 | 268-304 | LRR_4,Leucine Rich repeats (2 copies) | NLQLLSLGNNTFSGEIPTTLANLTNLATLYLWGNELS |
| Seg: seg | 285-296 | seg | TTLANLTNLATL |
| HMMSmart: SM00369 IPR003591
|
314-338 | Leucine-rich repeats, typical (most populate Leucine-rich repeat, typical subtype
|
LTKMQYLGLNSNKLTSEIPACLSDL |
| HMMSmart: SM00365 | 338-359 | Leucine-rich repeat, SDS22-like subfamily | LTKMEKLYLYQNQITGSIPKEI |
List of Contributions
There has not been any contribution yet.
