PRGDB00048933 (putative NBS-LRR disease resistance protein)
| putative NBS-LRR disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 83571777 (DQ285630) |
| Gene Class | NL |
| Domain Type | NBS, LRR, LRR, Others |
| Gene Species | Oryza sativa Indica Group |
DNA Sequence
ATGGCCATGTCGCTGGTCGGGAGTGCCATCAGAGTGGCTTCTTCTGCTTCCAGCCAAGAGATGAGCATGCTGATTGGTGTGCAAAACGAGATTTGGTTCATAAAAGATGAGCTGAAGACAATGCAGGCATTCCTGAGGGCGGCTGAAGTAAGGAAAGATCAAGATGAACTCGTGAAGGTGTGGGCTGAGCAAGTGAGAGATCTAGCCTACGACATTGAAGATTGTCTTCAGGAGTTTGCTGTCCATGTTGGGCATCAAAGCCTATCAATGCAGCTGATTAAGCTCTGCCACCGACACCGAATCGCTGTCCAGATTCGGAACCTGAAACAGAGGGTTGAAGAAGTGAGCAATAGAAACATGCGTTACAATCTAATCAAGTCTGTTCCATCTAGCAGTACCGATGACTCCCAAAGCAACATGGAATTGATTCGGTATCAGACTGCTCATTATGTTAATGAATCAGAGCTTGTTGGGTTTGACGTTCCCAAAAAGGAGATCCTGGAGTTGGTATCAAGCAGTGAAAATGCTGAAGCCCAAACAATTTGGATTGTCGGAGAAGGTGGTCTTGGGAAGACTACTCTTGCAAAGAAGGTTTATGAAAGCTCAGATGTTAGTAGCAAGTTCCCGTGTCGTGCTTGGATCACTGTGTCACGATCATTTAATGTCAAGGATTTACTGAAGAACATGATCAAGCAATTACTAGGGGAAGACTCACTCAAGAAACTCTTGGATGAACACAAAGAGGTGATTGTAGAAAAGCACAACCTTACAGACCACCTGAACAAAGGGCTTAGAGGGAGAAGGTATTTTCTTGTTCTTGATGACTTGTGGACCACACAAGCATGGGATTGCATTAAACCTACTTCCTGGGGAAATAACATGGAAGGTAGCCGAGTTGTAGTAACAACAAGAAACAAAAACCTAGCAGGTGGTAGTTCCACCTCGCCAGTCTACTGCCTTAAAACTCTAGAGAAAGAAGATGCTACCAAATTGTTGTTAAGAAAGACAAAAAGAAGTCTGCATGACATAGAAAAAGATCAAATGAAAGAAATATTTGAAAAGATACTAAAGAAATGTGGAGGTCTACCGCTAGCTATAATCACAATAGGTGCAGTCCTTGAAGGGAAAGATATAAAAGAGTGGGAAATTTTGTATGCTCAACTTCCATCAGAACTTGAAAGCAATCCAATCGCTGAACCAATGAAGAAGGTGGTAACCCTTAGTTACAATTACTTGCCATCTCATCTTAAGCCTTGCTTTCTGTACCTTTGCATCTTTCCTGAGGATTTTGATATCCAAAGGAAGCGCCTAGTACATAGATGGATTGCAGAGGGGTTTATTAGAGCTAGGGGTGGAGTGGGAATTGTGGATGTGGCACAAAAGTATTTTGATGAGTTGATCAACCGAAGTATGATTCAAGCATCTAGAGTGGATATAGAGGGAAATATTAAGAGCTGCCGAGTCCATGATATCATGCGTGATGTCATGATATCAATATCTAGGGAAGAAAATTTTGTATACTTGATGGGTGATGATGGAACTAGTGTAGTGGAGGAAAATATTCGCCATTTAGTGCACCATGATACTAGCAAGTGTTCAAATATAGGCATGGATTGGAGCCATGTACGGTCATTAACTTTGTTTGGCAATGAGAGACCCAAAGGGCTATCTCCTTCATTTTGTTTTCCCCAATTGAAGATGCTAAGAGTGCTGGATCTTCAAGATGTCAAATTTGGGATGACACAAAAAGATATCGGAAAAATAGGGTTGCTGCGTCACTTGAAATATGTGAATATTGGAGGGCATTCAAGTATTTATGCACTTCCTAGGTGTATAGGAAAATTAAAAGACTTGTGCACTTTGGACATAACTGACAGTTACATTACAGAACTACCAACTGAGATTAGTAAATTGCAGAGTCTATGTATTCTCCGTTGTAGAGGAAGACCAAACTCGGGGGATTTTAATCTAAATGATCCTAAGGATTGTCTAATTGCCTTCTCATGTTTGCCTCTGCTTATGGCTGCAACCGATTCTGATGAACGTAATAAAATAATTGCTGAGCTACACGTGGGTTGTTCAAGTCAATGGTCTCCTAATGGTGGTACATATGGTGTGAGGGTACCTAGAGGAATCAAGAATTTGAAAAGGCTGCAGGTGCTAGAGACAGTGGATATCAATCGAACCAGCAGTAAGTCAGTTGAAGAGTTGGGAGAGCTTATCCAGCTAAGAAAACTAAGTGTAGTAACACAAGGGTCCACCAAGGAAAAATGCAAAATACTCTGTACAGCCATTCAGAAGCTAACTTCCCTCAAAACTCTCTATCTGAATGCTCATGGACCCTTGGATACTGGAACACTTGAATGGCTACATTCTATTTCCCATCTTCCTTCCCTGAGGATCATCAGATTGATCGGATACATGAAAGAGATGCCCAACTGGTTTAGGGAGCTCAGACAGCTGGTGAAGATTCACTTGCAGAATAGCCAACTAGAGGAGGATAAAACAATGGAGATACTCGGAGAACTGCCTAATCTCATGCTCCTTTTCCTTAGTTGGCGAGCGGTGCTAATCATTCGCAATCAGAAGCAACTGAAAGAGGTGAGATTTGAAGAGGGAACCTCACCCTGGATGGAAAGGATTGATATCAGAGAATGCAGATTGACATCAGGGATTGCTGGTATCAAACACCTTCCGAGGCTTAAGGAGATTTCACTTGAATACAGTGCTAAAGTGGTGAGGCTAGGTCAGCTAGAGGTTGAAATGGGCACACACCCCAATCGACCCATGTTGCGCCTGTTTGGGGAGCGAAGCCGTCATGACCTGGGGAACACCCAAGTAACTGTCGATGAACAACAACTGCAGGTGAGTGTTTTGGAAAATACGATGAATAGTGTTTTCTGTTGTGAACAATGCAGGTCGACACTGGATTGCCGGTCAGACCAGGTGGTGCACGGCAGTCAAACCGGAGATTTTGCTCGAGGCCATGGGAGTATATCCAGTGATGGACCGGGACTAGGCTTGGGAGAAGTTAAAGTCCAGACAGTCAAGAATATCACGCGGGATGCTCATGCTAGAGAACAAATGCATGTGAAGAGGTTCATCGATACGTGTTTTTCTGGACCCCAACGGTTTGACCGGAGTTCATTGTGCGGTCTAACCAGCAGGCGGTCACACCGACGGCAGGGAGGCGGTCCAACTAGTGCAAGGGATGGGAGCAAAAATAAAAACAATCCAATGGTGGTCGACGTAACAAGACAGTTTCAACCACTAGGTATGAAAACAGAGCGGATAGTTGTTGATGGTTGTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative NBS-LRR disease resistance protein | putative NBS-LRR disease resistance protein [Oryza sativa (indica cultivar-group)]. | MAMSLVGSAIRVASSASSQEMSMLIGVQNEIWFIKDELKTMQAFLRAAEVRKDQDELVKVWAEQVRDLAYDIEDCLQEFAVHVGHQSLSMQLIKLCHRHRIAVQIRNLKQRVEEVSNRNMRYNLIKSVPSSSTDDSQSNMELIRYQTAHYVNESELVGFDVPKKEILELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTRNKNLAGGSSTSPVYCLKTLEKEDATKLLLRKTKRSLHDIEKDQMKEIFEKILKKCGGLPLAIITIGAVLEGKDIKEWEILYAQLPSELESNPIAEPMKKVVTLSYNYLPSHLKPCFLYLCIFPEDFDIQRKRLVHRWIAEGFIRARGGVGIVDVAQKYFDELINRSMIQASRVDIEGNIKSCRVHDIMRDVMISISREENFVYLMGDDGTSVVEENIRHLVHHDTSKCSNIGMDWSHVRSLTLFGNERPKGLSPSFCFPQLKMLRVLDLQDVKFGMTQKDIGKIGLLRHLKYVNIGGHSSIYALPRCIGKLKDLCTLDITDSYITELPTEISKLQSLCILRCRGRPNSGDFNLNDPKDCLIAFSCLPLLMAATDSDERNKIIAELHVGCSSQWSPNGGTYGVRVPRGIKNLKRLQVLETVDINRTSSKSVEELGELIQLRKLSVVTQGSTKEKCKILCTAIQKLTSLKTLYLNAHGPLDTGTLEWLHSISHLPSLRIIRLIGYMKEMPNWFRELRQLVKIHLQNSQLEEDKTMEILGELPNLMLLFLSWRAVLIIRNQKQLKEVRFEEGTSPWMERIDIRECRLTSGIAGIKHLPRLKEISLEYSAKVVRLGQLEVEMGTHPNRPMLRLFGERSRHDLGNTQVTVDEQQLQVSVLENTMNSVFCCEQCRSTLDCRSDQVVHGSQTGDFARGHGSISSDGPGLGLGEVKVQTVKNITRDAHAREQMHVKRFIDTCFSGPQRFDRSSLCGLTSRRSHRRQGGGPTSARDGSKNKNNPMVVDVTRQFQPLGMKTERIVVDGC |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 2-953 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | AMSLVGSAIRVASSASSQEMSMLIGVQNEIWFIKDELKTMQAFLRAAEVRKDQDELVKVWAEQVRDLAYDIEDCLQEFAVHVGHQSLSMQLIKLCHRHRIAVQIRNLKQRVEEVSNRNMRYNLIKSVPSSSTDDSQSNMELIRYQTAHYVNESELVGFDVPKKEILELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTRNKNLAGGSSTSPVYCLKTLEKEDATKLLLRKTKRSLHDIEKDQMKEIFEKILKKCGGLPLAIITIGAVLEGKDIKEWEILYAQLPSELESNPIAEPMKKVVTLSYNYLPSHLKPCFLYLCIFPEDFDIQRKRLVHRWIAEGFIRARGGVGIVDVAQKYFDELINRSMIQASRVDIEGNIKSCRVHDIMRDVMISISREENFVYLMGDDGTSVVEENIRHLVHHDTSKCSNIGMDWSHVRSLTLFGNERPKGLSPSFCFPQLKMLRVLDLQDVKFGMTQKDIGKIGLLRHLKYVNIGGHSSIYALPRCIGKLKDLCTLDITDSYITELPTEISKLQSLCILRCRGRPNSGDFNLNDPKDCLIAFSCLPLLMAATDSDERNKIIAELHVGCSSQWSPNGGTYGVRVPRGIKNLKRLQVLETVDINRTSSKSVEELGELIQLRKLSVVTQGSTKEKCKILCTAIQKLTSLKTLYLNAHGPLDTGTLEWLHSISHLPSLRIIRLIGYMKEMPNWFRELRQLVKIHLQNSQLEEDKTMEILGELPNLMLLFLSWRAVLIIRNQKQLKEVRFEEGTSPWMERIDIRECRLTSGIAGIKHLPRLKEISLEYSAKVVRLGQLEVEMGTHPNRPMLRLFGERSRHDLGNTQVTVDEQQ |
| HMMPanther: PTHR23155:SF149 | 2-953 | PTHR23155:SF149,OS06G0146100 PROTEIN | AMSLVGSAIRVASSASSQEMSMLIGVQNEIWFIKDELKTMQAFLRAAEVRKDQDELVKVWAEQVRDLAYDIEDCLQEFAVHVGHQSLSMQLIKLCHRHRIAVQIRNLKQRVEEVSNRNMRYNLIKSVPSSSTDDSQSNMELIRYQTAHYVNESELVGFDVPKKEILELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTRNKNLAGGSSTSPVYCLKTLEKEDATKLLLRKTKRSLHDIEKDQMKEIFEKILKKCGGLPLAIITIGAVLEGKDIKEWEILYAQLPSELESNPIAEPMKKVVTLSYNYLPSHLKPCFLYLCIFPEDFDIQRKRLVHRWIAEGFIRARGGVGIVDVAQKYFDELINRSMIQASRVDIEGNIKSCRVHDIMRDVMISISREENFVYLMGDDGTSVVEENIRHLVHHDTSKCSNIGMDWSHVRSLTLFGNERPKGLSPSFCFPQLKMLRVLDLQDVKFGMTQKDIGKIGLLRHLKYVNIGGHSSIYALPRCIGKLKDLCTLDITDSYITELPTEISKLQSLCILRCRGRPNSGDFNLNDPKDCLIAFSCLPLLMAATDSDERNKIIAELHVGCSSQWSPNGGTYGVRVPRGIKNLKRLQVLETVDINRTSSKSVEELGELIQLRKLSVVTQGSTKEKCKILCTAIQKLTSLKTLYLNAHGPLDTGTLEWLHSISHLPSLRIIRLIGYMKEMPNWFRELRQLVKIHLQNSQLEEDKTMEILGELPNLMLLFLSWRAVLIIRNQKQLKEVRFEEGTSPWMERIDIRECRLTSGIAGIKHLPRLKEISLEYSAKVVRLGQLEVEMGTHPNRPMLRLFGERSRHDLGNTQVTVDEQQ |
| superfamily: SSF52540 | 144-395 | SSF52540 | RYQTAHYVNESELVGFDVPKKEILELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTRNKNLAGGSSTSPVYCLKTLEKEDATKLLLRKTKRSLHDIEKDQMKEIFEKILKKCGGLPLAIITIGAVLEGKDIKEWEILYAQLPSELESN |
| Gene3D: G3DSA:3.40.50.300 | 162-304 | G3DSA:3.40.50.300 | PKKEILELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTR |
| HMMPfam: PF00931 IPR002182
|
167-449 | NB-ARC,NBS NB-ARC
|
LELVSSSENAEAQTIWIVGEGGLGKTTLAKKVYESSDVSSKFPCRAWITVSRSFNVKDLLKNMIKQLLGEDSLKKLLDEHKEVIVEKHNLTDHLNKGLRGRRYFLVLDDLWTTQAWDCIKPTSWGNNMEGSRVVVTTRNKNLAGGSSTSPVYCLKTLEKEDATKLLLRKTKRSLHDIEKDQMKEIFEKILKKCGGLPLAIITIGAVLEGKDIKEWEILYAQLPSELESNPIAEPMKKVVTLSYNYLPSHLKPCFLYLCIFPEDFDIQRKRLVHRWIAEGFIRA |
| FPrintScan: PR00364 IPR000767
|
180-195 | DISEASERSIST Disease resistance protein
|
TIWIVGEGGLGKTTLA |
| FPrintScan: PR00364 IPR000767
|
263-277 | DISEASERSIST Disease resistance protein
|
GLRGRRYFLVLDDLW |
| FPrintScan: PR00364 IPR000767
|
359-373 | DISEASERSIST Disease resistance protein
|
CGGLPLAIITIGAVL |
| superfamily: SSF52058 | 487-908 | SSF52058,LRR | RVHDIMRDVMISISREENFVYLMGDDGTSVVEENIRHLVHHDTSKCSNIGMDWSHVRSLTLFGNERPKGLSPSFCFPQLKMLRVLDLQDVKFGMTQKDIGKIGLLRHLKYVNIGGHSSIYALPRCIGKLKDLCTLDITDSYITELPTEISKLQSLCILRCRGRPNSGDFNLNDPKDCLIAFSCLPLLMAATDSDERNKIIAELHVGCSSQWSPNGGTYGVRVPRGIKNLKRLQVLETVDINRTSSKSVEELGELIQLRKLSVVTQGSTKEKCKILCTAIQKLTSLKTLYLNAHGPLDTGTLEWLHSISHLPSLRIIRLIGYMKEMPNWFRELRQLVKIHLQNSQLEEDKTMEILGELPNLMLLFLSWRAVLIIRNQKQLKEVRFEEGTSPWMERIDIRECRLTSGIAGIKHLPRLKEISLEY |
| Gene3D: G3DSA:3.80.10.10 | 540-651 | G3DSA:3.80.10.10 | SHVRSLTLFGNERPKGLSPSFCFPQLKMLRVLDLQDVKFGMTQKDIGKIGLLRHLKYVNIGGHSSIYALPRCIGKLKDLCTLDITDSYITELPTEISKLQSLCILRCRGRPN |
| Gene3D: G3DSA:3.80.10.10 | 702-734 | G3DSA:3.80.10.10 | GTYGVRVPRGIKNLKRLQVLETVDINRTSSKSV |
| Gene3D: G3DSA:3.80.10.10 | 735-907 | G3DSA:3.80.10.10 | EELGELIQLRKLSVVTQGSTKEKCKILCTAIQKLTSLKTLYLNAHGPLDTGTLEWLHSISHLPSLRIIRLIGYMKEMPNWFRELRQLVKIHLQNSQLEEDKTMEILGELPNLMLLFLSWRAVLIIRNQKQLKEVRFEEGTSPWMERIDIRECRLTSGIAGIKHLPRLKEISLE |
| FPrintScan: PR00364 IPR000767
|
766-782 | DISEASERSIST Disease resistance protein
|
QKLTSLKTLYLNAHGPL |
List of References
Shaohong Qu, Guifu Liu, Bo Zhou, Maria Bellizzi, Lirong Zeng, Liangying Dai, Bin Han, Guo-Liang Wang
The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice.
Genetics: 2006, 172(3);1901-14
PubMed:16387888
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.
