PRGDB00050493 (60I2G15)

60I2G15
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	40644186 (AJ416708)
Gene Class	Unknown
Domain Type
Gene Species	Populus deltoides
	Comment?

Populus deltoides MER locus, genomic DNA, cultivar S9-2.

DNA Sequence

ATGAAATCAACAGCACGTCGTCAGAAGACGGTTGCAGCTAGTTCTTCTAGCAGCGAGGAGGACGTATCCTTAGGTGCTGATCACGGCGAGGAATCTACGCCAACTTGTGATGCTGCCTCTTCTAGCGCGGTTTCACAGCGCAGAAGCGGTGTGCCTTCACAGCGGGGTCAATTCACCCGCAAGTACCAAGCACAATGGAAGGATGACCTCTCAATGTTCACAAACATTGAGGCTGCAAGGACTATAACATTGGCGTTTAAATCGTCGATGGAGATTCCATTGTTTCAATGGAGCCAGGTTTCCAAACATCCTGAGTGGAAACCTAATATCGATGCATGGTTTAAGCGATTTCAGAACAAATTTGAGTGGGATAGGGCGGACAACAATGTTGTGAGGAGGGTATGGGAGAATCACGCGGCAACTAGGTTGCGTGATTTTTGGTATGACACCCAAAAAAAATCAAAAAGACATGCGAGGGATAACGGTCTTGAAGGATGGAATGAGGTGGCGGTTTGGCAGGAATTCAAACCGCCATTCATCTCGGGGGAAATATGGACGGCATATATTGAGCACGTGACCTCAGAGCGGTTCTCACGGTGCTCACATTCTGGCGCCGACAACCGGAACTGGCAAATTCATGGTTCGGTGACGACGCACACTGGCGGATCCGTCCCATTCAGCGCACATGCAAAGCGGATGGCTGCGTCTCTTGGACGTGAACCGAGTCCAATGGAGCTGTTTCTAGAGACGCATGTGCGGAGTCAAGACCGCCAAAAGGGGGTGCAGCAGTTCGTGGACAACCGTGCTCAGCACTTCGTGGAGACCTATAATAGCCGGTTGAGGGAGAGATATGGGGACAATCCGTCGACCCATCCAGATTTCGATCCAGATTTGTGGATGGAGGCGGGATCGTCTGGTGGACCCGATAAAAACAGGGTCTACGGGCTCTCCAACACTACGGCTGACAACTTGCGTTCGACTCGTAGTGTCTCAACTGTTGGAAGCTCTCCATCAGTATCGAACACCCAGTCTGAGGAGTTCATTGCGTTGAAACAACAATATCAACAACTCTCGACGAATTATGATGAGCTCCGTCAAATAGTCATGGAGATGAGATCAAAGATGGGTGACGATACTTGTGCAGCATCTTTTTGGCCGTATGGTCCCGGGAACAACCAGCCTCCTCCTCCTCCTCCGCCTCCTCCTCCAGCTCCGCCGCTATTCTAG

Domains

Domain	Start-End	Description	Sequence
HMMPfam: PF03004 IPR004252	183-316	Transposase_24 Transposase, Ptta/En/Spm, plant	EIWTAYIEHVTSERFSRCSHSGADNRNWQIHGSVTTHTGGSVPFSAHAKRMAASLGREPSPMELFLETHVRSQDRQKGVQQFVDNRAQHFVETYNSRLRERYGDNPSTHPDFDPDLWMEAGSSGGPDKNRVYGL

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Analyses

Blast

Blast matches against Reference R-Genes. Show