PRGDB00050633 (Pto-like receptor kinase resistance protein)

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Pto-like receptor kinase resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 47498955 (AY583623)
Gene Class Unknown
Domain Type Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Rosa roxburghii

Comment?

Rosa roxburghii clone STK2 Pto-like receptor kinase resistance protein gene, partial cds.

DNA Sequence

TGGGGCACGGGGGGTTCGGGAAAGTGTACCTTGGGGTGTTGGAAGATAGTACTAAGCTTGCTATCAAACGAGGGAACCCGAACTCTGAGCAAGGTATTAATGAGTTCAGAACAGAAATGGACATGCTCTCCAAGCTAAGACATCGCCACCTTGTTTCACTGATTGGATTCTGTGATGAGAATAATGAGATGATACTGGTGTATGAGTACATGGCTAATGGACCCCTTCGAGACCACCTCTATGGCTCGAACCTGCTTCCATTGTCATGGAAGCAAAGGCTCGAGGTTTGCATTGGCGCTGCTCGTGGTTTGCATTATCTGCATACTGGTGCAGCACAAGGCATTATCCATCGTGATGTCAAGACGACGAATATCCTCCTGGATGAGAATTTCGTTGCAAAAGTAGCTGACTTTGGACTGTCAAAAGCTGCTCCATCGTTGGAACAAACCCATGTCAGCACAGCCGTGGAGGGAAGTTTTGGTTATCTTGATCCTGAGTACTTCAGGAGGCAGCAGCTTACTGAGAAATCCGATGTCTACTCATTCGGGGT


Protein sequences

Name Description Sequence
Pto-like receptor kinase resistance protein Pto-like receptor kinase resistance protein [Rosa roxburghii].

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-183 PTHR24420,FAMILY NOT NAMED

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

HMMPfam: PF07714
IPR001245
1-183 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

HMMPanther: PTHR24420:SF550
1-183 PTHR24420:SF550

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

Gene3D: G3DSA:3.30.200.20
1-55 G3DSA:3.30.200.20

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIG

superfamily: SSF56112
IPR011009
1-183 Kinase_like
Protein kinase-like domain

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

ProfileScan: PS50011
IPR000719
1-183 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

GHGGFGKVYLGVLEDSTKLAIKRGNPNSEQGINEFRTEMDMLSKLRHRHLVSLIGFCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

Gene3D: G3DSA:1.10.510.10
56-183 G3DSA:1.10.510.10

FCDENNEMILVYEYMANGPLRDHLYGSNLLPLSWKQRLEVCIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVEGSFGYLDPEYFRRQQLTEKSDVYSFGV

PatternScan: PS00108
IPR008271
114-126 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKTTNILL






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Analyses

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