PRGDB00062252 (Disease resistance protein RPM1, putative)
| Disease resistance protein RPM1, putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 255544062 (XM_002513048) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Ricinus communis |
DNA Sequence
ATGGCTGATATCGTGGCGTCAATAGCTAAGGCTTTGGTACTTGACATGGGTGATAATGTTGTTGACTTCTTCAAGGGCTCAACTCTGAAGGTACTGCTCGAGAGACTGTCTGTCCAGATGAGGGCTGCCAAAGCTGTGCTTGATGATTATCAGATTACTGACGAACGTGGAAAACGGTGGCTTTACCGGCTTAGAGAAGCTAGTTATGACGCTGAAGATTTGTTGGATGAAATTGCTTATAATGCTCTGGGATCCGAGTTGGAAGCTGGCTCTCCCGAACAGGTGCGGGAATTGTTCCTTTCTCGGACGGTAGAGCAAAATTTGGAGGCTATGATTGATGAATTGGATGGTATATTAGATGACGTTGAGTTTAAAGAGACGATTACTAAGGGAGAGAATCAATCAGCAGGGGGAATGCTGACAACTTCTCGTCCAGAAGATAACGCATCGGCTATTTATGGTCGGGAGGCTGATAAGGATGCCATGATGAGTCTGCTGTTATCCGATGATCCAAGTGAAGACGATGTAGGTCTTATTCGCATTGTGGGTATGGCTGGGGTTGGTAAAACCACCTTTGCTCGCTTTCTCTACAATGACCAGAGAGTGCGATGCCATTTTGAACTTCAAGCATGGGTCTCCCTTACAAGGCTGTATGCTGTTGACAAGGTAATGCAAGTTATTATCCAGAGATTCACAGGGGATCCTTGTTATATCAGCGAATTAAGTGCGCTTCAAACTACGTTGACAGAGTTTTTAACAAAAAAAAGGTTCTTGCTTGTTTTAGATGATGAAGGTTGGAACCATGATGAAGATTGGCGCATTTTGCTCTCACCTTTGAGGTGTGGAGTAAGGGGAAGCAAGATCATTGTGACTACAAGCAATGGTGCATTATCAAACATGTGCACTGGTCCTGTTCATCATCTGAAAGAATTAACTGATGAGGATTGTTGGTCCTTGTTTTCACGATATGCATTTGATGGTGTAGATTTCAGAGCCCATCCTGACTTAGAAGAGATCGGTAGAGCAATAGCAAAAAAGTGCAAAGGCCTACCTTTGTCGGCAAAAATACTTGGGAAATTCCTGCACACCAAAAGAGATGCTTTAGAATGGAAAAACATAATGTATACAATAGCTCGGAATTTGGACGTGGGTGCCAACATTCTTCAAATTCTAAAATTGAGCTATAACTATCTCCCACCACATGTAAGGCATTGTTTAGCTTACTGCTCCATTTTCCCTAAAAATTACAGGTTTCAAAAGGAGGAACTGATTCATTTATGGATGGCAGAGGGTTTATTGGTCCAATCCGAAGGCAAAAAACATATAGAAGAAGTGGGTGAGGAGTGCTTCCAGCAAATGGTATCAAGATCATTTTTCGAGCAATCAAGTATTAATCCATCCTCCTTTGTTAAGCATGACTTGGCTACAGACGTGGCTGCAGATTCATACTTTCATGTGGATCGGGTTTATTCATATGGCAGTGCTGGAGAGGTTCGTCGTTTTCTATATGCAGAAGATGATTCCCGTGAACTGTTTGAGCTCATCCATAGACCTGAATCTTTGCGCACCTTCTTCATTATGAAGCGGTCCAATTGGATGCGGTATAATGAGGTAATAAACAAGTTATTACTGAAATTCAGGCGCTTACGAGTACTATCTCTTTCTGGATGTGATGGTATTTCTCAATTGCATGATTCAATTGGCACATTGAAGCATTTACGGTTTTTGAATATCTCAGAAACATCAATCTCAAAGTTGCCTCCATGTGTATGTAAATTATATTATTTGCAAACACTAATCTTGTACGGGTGCAAACACTTAACTGAGTTGCCAGCCAACTTGAGAAATTTAATCAACCTAAGTCTCCTTGATATCCGGGAAACAAATTTGCAATGGATGCCGTCAGCAATGGGTAAACTAACAAAGCTTCGAAAGTTGAGCGATTTCGTTGTAGGAAAACAGAAAGGATCCAGCATCAAAGAATTGGGAGTGCTTCAGCGTCTGCAAGGAGAACTCAGTGTATGGAATCTTCAAAACGTGTTGGATGCTCAAGATGCCTTTGTAGCCAATTTGAAAGAAAAGCACCTTAATGAGTTGAAGTTGAAATGGGATGAGAATACTCAAGATGCAAATCTTGAAGAAGATGTACTCAAGCAATTACAGCCTCATGTGAATGTGAAACATCTTCTTATTGCTGGTTATGGGGCAAAAAGATTTCCACAATGGGTAGGAGATTCTTCTTTCTCAAATATGGTATCCTTGAAGCTCATTGGATGCAAGTATTGCTCGTTCCTACCACCACTAGGGCAATTAAAGTCCCTTCAAGAACTTTGGATCACAGAATTCCATGGAATTGTGGATGTTGGTGCTGGCTTTTATGGAAGTTCTATTGGCATGAAGCCTTTTGGATCTCTCAAGGTTTTGAAATTTGAAAGGTTGCCATTATGGCGTGCGTGGGTTTCTTATACGGACGAAGACAACAATGAGGCTTTTCCCCTCCTACAGGAGCTCTATATACGTGATTGTCCCAGCCTTTTAAAGGCATTGCCTAGGCATCTTCCCTGTTTAACAACGCTTGACATAGAAGGATGTCAGAAACTAGTTGTGGATGTCCTTCCAAGTGCTCCTTCTATCCTAAAATATATACTGAAGGACAACTCTCGCCTTTTGCAGTTGCAGGAATTGCCTTCTGGGATGCGCCTCCTTCGAGTGGATCAATTTTTCCACTTAGATTTCATGCTAGAGAGAAAGAAGCAAGCAATCGCTCTTTCTGCTAATTTAGAAGCAATTCATATCAGTCGATGTCATTCTCTCAAGTTCTTCCCACTAGAGTATTTCCCCAACTTAAGGAGATTTGAGGTCTATGGATGTCCAAATCTTGAATCTCTTTTTGTGCTTGAAGCACTTCTTGAGGATAAGAAAGGCAATCTGTCAGAGAGTCTTTCAAATTTCCCTCTTCTCCAAGAGCTACGGATAAGAGAATGTCCAAAACTAACAAAGGCTCTACCCAGTTCCCTCCCTTCTTTAACAACTCTTGAGATAGAAGGATGTCAGCGACTAGTTGTGGCTTTTGTTCCAGAGACTTCTGCTACTTTAGAAGCAATCCATATCAGCGGATGTCATTCTCTCAAGTTCTTCCCACTAGAGTATTTCCCCAAGTTAAGGAGATTTGATGTCTATGGATGTCCAAATCTTGAATCCCTTTTTGTGCCTGAAGACGACCTATCAGGGAGTCTCTTAAATTTCCCTCTTGTTCAAGAGCTCCGCATAAGAGAATGTCCAAAACTAACAAAGGCTCTACCCAGTTCCCTCCCTTATTTAATAACACTTGAGATAGAAGGATGTCAGCAACTAGTTGTGGCGTCTGTACCAGAGGCTCCTGCCATTGTTAGGATGTTGTTAAGGATAGATACTTGTCAAATGCTGTTAGAAAAATCAACATTTGAAATTAGAAACTGGGATTCATTAAAATATTTCCCTCTAGAGATGTTTCCTAAGCTAAACACTCTTCAAATAATTTCTTGTCCAAATCTTGATTCCCTTTGTGTGTCTAAGGCACCCCTCGGGGATTTCTTATTTCTCAACTGTGTGGAAATCTGGGGATGTCATAATCTGGAATCTTTCCCTATAGGACTGGCTGCCTCGAATCTGAAAGTGCTTTCTTTAAGATGTTGCTCAAAATTGAAATCGCTGCCTGAACCAATGCCCACTCTCCTACCTTCTCTTGTGGATTTGCAAATAGTTGATTGTTCAGAACTTGATCTGCTTCCAGAAGGGGGCTGGCCCTCCAAATTAGAATCACTTGAGATCCAAAGTTGCAAAAAGCTCTTTGCTTGCCTCACGCAATGGAATTTCCAAAGTTTAACATGTCTTTCACGATTTGTATTTGGTATGTGTGAAGATGTTGAATCTTTCCCGGAGAACATGCTTTTACCTCCTAGTCTTAACTCTCTTGAAATTGGGTACTGTCAAATTTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein RPM1, putative | Disease resistance protein RPM1, putative [Ricinus communis]. | MADIVASIAKALVLDMGDNVVDFFKGSTLKVLLERLSVQMRAAKAVLDDYQITDERGKRWLYRLREASYDAEDLLDEIAYNALGSELEAGSPEQVRELFLSRTVEQNLEAMIDELDGILDDVEFKETITKGENQSAGGMLTTSRPEDNASAIYGREADKDAMMSLLLSDDPSEDDVGLIRIVGMAGVGKTTFARFLYNDQRVRCHFELQAWVSLTRLYAVDKVMQVIIQRFTGDPCYISELSALQTTLTEFLTKKRFLLVLDDEGWNHDEDWRILLSPLRCGVRGSKIIVTTSNGALSNMCTGPVHHLKELTDEDCWSLFSRYAFDGVDFRAHPDLEEIGRAIAKKCKGLPLSAKILGKFLHTKRDALEWKNIMYTIARNLDVGANILQILKLSYNYLPPHVRHCLAYCSIFPKNYRFQKEELIHLWMAEGLLVQSEGKKHIEEVGEECFQQMVSRSFFEQSSINPSSFVKHDLATDVAADSYFHVDRVYSYGSAGEVRRFLYAEDDSRELFELIHRPESLRTFFIMKRSNWMRYNEVINKLLLKFRRLRVLSLSGCDGISQLHDSIGTLKHLRFLNISETSISKLPPCVCKLYYLQTLILYGCKHLTELPANLRNLINLSLLDIRETNLQWMPSAMGKLTKLRKLSDFVVGKQKGSSIKELGVLQRLQGELSVWNLQNVLDAQDAFVANLKEKHLNELKLKWDENTQDANLEEDVLKQLQPHVNVKHLLIAGYGAKRFPQWVGDSSFSNMVSLKLIGCKYCSFLPPLGQLKSLQELWITEFHGIVDVGAGFYGSSIGMKPFGSLKVLKFERLPLWRAWVSYTDEDNNEAFPLLQELYIRDCPSLLKALPRHLPCLTTLDIEGCQKLVVDVLPSAPSILKYILKDNSRLLQLQELPSGMRLLRVDQFFHLDFMLERKKQAIALSANLEAIHISRCHSLKFFPLEYFPNLRRFEVYGCPNLESLFVLEALLEDKKGNLSESLSNFPLLQELRIRECPKLTKALPSSLPSLTTLEIEGCQRLVVAFVPETSATLEAIHISGCHSLKFFPLEYFPKLRRFDVYGCPNLESLFVPEDDLSGSLLNFPLVQELRIRECPKLTKALPSSLPYLITLEIEGCQQLVVASVPEAPAIVRMLLRIDTCQMLLEKSTFEIRNWDSLKYFPLEMFPKLNTLQIISCPNLDSLCVSKAPLGDFLFLNCVEIWGCHNLESFPIGLAASNLKVLSLRCCSKLKSLPEPMPTLLPSLVDLQIVDCSELDLLPEGGWPSKLESLEIQSCKKLFACLTQWNFQSLTCLSRFVFGMCEDVESFPENMLLPPSLNSLEIGYCQI |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 33-1009 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LERLSVQMRAAKAVLDDYQITDERGKRWLYRLREASYDAEDLLDEIAYNALGSELEAGSPEQVRELFLSRTVEQNLEAMIDELDGILDDVEFKETITKGENQSAGGMLTTSRPEDNASAIYGREADKDAMMSLLLSDDPSEDDVGLIRIVGMAGVGKTTFARFLYNDQRVRCHFELQAWVSLTRLYAVDKVMQVIIQRFTGDPCYISELSALQTTLTEFLTKKRFLLVLDDEGWNHDEDWRILLSPLRCGVRGSKIIVTTSNGALSNMCTGPVHHLKELTDEDCWSLFSRYAFDGVDFRAHPDLEEIGRAIAKKCKGLPLSAKILGKFLHTKRDALEWKNIMYTIARNLDVGANILQILKLSYNYLPPHVRHCLAYCSIFPKNYRFQKEELIHLWMAEGLLVQSEGKKHIEEVGEECFQQMVSRSFFEQSSINPSSFVKHDLATDVAADSYFHVDRVYSYGSAGEVRRFLYAEDDSRELFELIHRPESLRTFFIMKRSNWMRYNEVINKLLLKFRRLRVLSLSGCDGISQLHDSIGTLKHLRFLNISETSISKLPPCVCKLYYLQTLILYGCKHLTELPANLRNLINLSLLDIRETNLQWMPSAMGKLTKLRKLSDFVVGKQKGSSIKELGVLQRLQGELSVWNLQNVLDAQDAFVANLKEKHLNELKLKWDENTQDANLEEDVLKQLQPHVNVKHLLIAGYGAKRFPQWVGDSSFSNMVSLKLIGCKYCSFLPPLGQLKSLQELWITEFHGIVDVGAGFYGSSIGMKPFGSLKVLKFERLPLWRAWVSYTDEDNNEAFPLLQELYIRDCPSLLKALPRHLPCLTTLDIEGCQKLVVDVLPSAPSILKYILKDNSRLLQLQELPSGMRLLRVDQFFHLDFMLERKKQAIALSANLEAIHISRCHSLKFFPLEYFPNLRRFEVYGCPNLESLFVLEALLEDKKGNLSESLSNFPLLQELRIRECPKLTKALPSSLPSL |
| superfamily: SSF52540 | 150-381 | SSF52540 | SAIYGREADKDAMMSLLLSDDPSEDDVGLIRIVGMAGVGKTTFARFLYNDQRVRCHFELQAWVSLTRLYAVDKVMQVIIQRFTGDPCYISELSALQTTLTEFLTKKRFLLVLDDEGWNHDEDWRILLSPLRCGVRGSKIIVTTSNGALSNMCTGPVHHLKELTDEDCWSLFSRYAFDGVDFRAHPDLEEIGRAIAKKCKGLPLSAKILGKFLHTKRDALEWKNIMYTIARNL |
| HMMPfam: PF00931 IPR002182
|
156-436 | NB-ARC,NBS NB-ARC
|
EADKDAMMSLLLSDDPSEDDVGLIRIVGMAGVGKTTFARFLYNDQRVRCHFELQAWVSLTRLYAVDKVMQVIIQRFTGDPCYISELSALQTTLTEFLTKKRFLLVLDDEGWNHDEDWRILLSPLRCGVRGSKIIVTTSNGALSNMCTGPVHHLKELTDEDCWSLFSRYAFDGVDFRAHPDLEEIGRAIAKKCKGLPLSAKILGKFLHTKRDALEWKNIMYTIARNLDVGANILQILKLSYNYLPPHVRHCLAYCSIFPKNYRFQKEELIHLWMAEGLLVQS |
| Gene3D: G3DSA:3.40.50.300 | 172-295 | G3DSA:3.40.50.300 | SEDDVGLIRIVGMAGVGKTTFARFLYNDQRVRCHFELQAWVSLTRLYAVDKVMQVIIQRFTGDPCYISELSALQTTLTEFLTKKRFLLVLDDEGWNHDEDWRILLSPLRCGVRGSKIIVTTSNG |
| FPrintScan: PR00364 IPR000767
|
178-193 | DISEASERSIST Disease resistance protein
|
LIRIVGMAGVGKTTFA |
| FPrintScan: PR00364 IPR000767
|
251-265 | DISEASERSIST Disease resistance protein
|
FLTKKRFLLVLDDEG |
| FPrintScan: PR00364 IPR000767
|
347-361 | DISEASERSIST Disease resistance protein
|
CKGLPLSAKILGKFL |
| superfamily: SSF52058 | 470-958 | SSF52058,LRR | VKHDLATDVAADSYFHVDRVYSYGSAGEVRRFLYAEDDSRELFELIHRPESLRTFFIMKRSNWMRYNEVINKLLLKFRRLRVLSLSGCDGISQLHDSIGTLKHLRFLNISETSISKLPPCVCKLYYLQTLILYGCKHLTELPANLRNLINLSLLDIRETNLQWMPSAMGKLTKLRKLSDFVVGKQKGSSIKELGVLQRLQGELSVWNLQNVLDAQDAFVANLKEKHLNELKLKWDENTQDANLEEDVLKQLQPHVNVKHLLIAGYGAKRFPQWVGDSSFSNMVSLKLIGCKYCSFLPPLGQLKSLQELWITEFHGIVDVGAGFYGSSIGMKPFGSLKVLKFERLPLWRAWVSYTDEDNNEAFPLLQELYIRDCPSLLKALPRHLPCLTTLDIEGCQKLVVDVLPSAPSILKYILKDNSRLLQLQELPSGMRLLRVDQFFHLDFMLERKKQAIALSANLEAIHISRCHSLKFFPLEYFPNLRRFEVYGCP |
| Gene3D: G3DSA:3.80.10.10 | 539-647 | G3DSA:3.80.10.10 | INKLLLKFRRLRVLSLSGCDGISQLHDSIGTLKHLRFLNISETSISKLPPCVCKLYYLQTLILYGCKHLTELPANLRNLINLSLLDIRETNLQWMPSAMGKLTKLRKLS |
| HMMPfam: PF13504 | 548-563 | LRR_7,Leucine rich repeat | RLRVLSLSGCDGISQL |
| HMMPfam: PF00560 IPR001611
|
596-617 | LRR_1 Leucine-rich repeat
|
LQTLILYGCKHLTELPANLRNL |
| Gene3D: G3DSA:3.80.10.10 | 682-880 | G3DSA:3.80.10.10 | DAQDAFVANLKEKHLNELKLKWDENTQDANLEEDVLKQLQPHVNVKHLLIAGYGAKRFPQWVGDSSFSNMVSLKLIGCKYCSFLPPLGQLKSLQELWITEFHGIVDVGAGFYGSSIGMKPFGSLKVLKFERLPLWRAWVSYTDEDNNEAFPLLQELYIRDCPSLLKALPRHLPCLTTLDIEGCQKLVVDVLPSAPSILK |
| FPrintScan: PR00364 IPR000767
|
851-867 | DISEASERSIST Disease resistance protein
|
RHLPCLTTLDIEGCQKL |
| Gene3D: G3DSA:3.80.10.10 | 925-1050 | G3DSA:3.80.10.10 | ANLEAIHISRCHSLKFFPLEYFPNLRRFEVYGCPNLESLFVLEALLEDKKGNLSESLSNFPLLQELRIRECPKLTKALPSSLPSLTTLEIEGCQRLVVAFVPETSATLEAIHISGCHSLKFFPLEY |
| superfamily: SSF52058 | 957-1292 | SSF52058,LRR | CPNLESLFVLEALLEDKKGNLSESLSNFPLLQELRIRECPKLTKALPSSLPSLTTLEIEGCQRLVVAFVPETSATLEAIHISGCHSLKFFPLEYFPKLRRFDVYGCPNLESLFVPEDDLSGSLLNFPLVQELRIRECPKLTKALPSSLPYLITLEIEGCQQLVVASVPEAPAIVRMLLRIDTCQMLLEKSTFEIRNWDSLKYFPLEMFPKLNTLQIISCPNLDSLCVSKAPLGDFLFLNCVEIWGCHNLESFPIGLAASNLKVLSLRCCSKLKSLPEPMPTLLPSLVDLQIVDCSELDLLPEGGWPSKLESLEIQSCKKLFACLTQWNFQSLTCLS |
| Gene3D: G3DSA:3.80.10.10 | 1051-1275 | G3DSA:3.80.10.10 | FPKLRRFDVYGCPNLESLFVPEDDLSGSLLNFPLVQELRIRECPKLTKALPSSLPYLITLEIEGCQQLVVASVPEAPAIVRMLLRIDTCQMLLEKSTFEIRNWDSLKYFPLEMFPKLNTLQIISCPNLDSLCVSKAPLGDFLFLNCVEIWGCHNLESFPIGLAASNLKVLSLRCCSKLKSLPEPMPTLLPSLVDLQIVDCSELDLLPEGGWPSKLESLEIQSCKK |
| HMMPfam: PF13504 | 1215-1232 | LRR_7,Leucine rich repeat | SNLKVLSLRCCSKLKSLP |
List of Contributions
There has not been any contribution yet.
