PRGDB00062253 (Disease resistance protein RGA2, putative)
| Disease resistance protein RGA2, putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 255544018 (XM_002513026) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Ricinus communis |
DNA Sequence
ATGTCTTCCAGCGAGGTTATAGACTTCTTGATCAAAAGCAAGAAGCTGGAGCCTGGACTGCTGCACAGAGTGAATACAACAATTATACATGTTAATGCAGTACTCTACGACGCAGAGGAGAAGCAGATCACTAATCCTGCTGTCAAAAACTGGCTCGACGACCTTCAGGATTGTGTCTTTGAAATCGATGACTTGTTGGATGAGTTTGCTCATAAAGCAGCACGATCCAAGGTGCTAAACTTTTTCTCTGCTCTTATTCCATTTAGTTATAAGGATGAGGATATGGTAGATAAGTTAGAAGAGATCCTTGAGAAGATCGATAACTTAATTAACTTAAAGGATGCTCTTAAGGGTATTGAAGGAAAGCCAATAATTCCACAAATTCCATCCACAACTTGTCTCGTAGATGAATCTGATATTTATGGCAGGGAAGCTGATCAGGAGGCCATAATGGAATTGTTGCTATCTAATGATCAAAATGACATAGTAGACGTGGTTCCCATTGTGGGTCTGTGTGGGATCGGTAAAACCACCCTTGCTCAATCTGTCTTTAACGACTATAGAGTAGATCAGGAGTTTGAAATCAGAGCATGGGTTTGTGTTGGAGGTGAATTTAATGTTTTTCAGATAACTAAAAGTTTTCTTGAAGGGATAACAGGAAAGACTTGTGACTATAAAGAATTAAACCCGCTTCAAGTTGAATTGCGGGATAGATTGAGTATGAGAAAGTTTTTGCTTGTATTAGATGATATTTGGAATGTTAATTATGAAGCCTGGGAACTTCTGCAAAAACCTTTGAAGCATGGGAGAGGAGGAGGCAAGATCATTGTTACGACACGAAATGAAAGTGTAGCATTAGTCACACTCACCATTCCAATCTATCATTTGAGAGAATTAAGTGATGATGACTGCTATACCTTGTTTAGAAGACATGCATTTGACAGTACTGAAGGAACAGGAGAGCATCCACAATTAGAAGGACTTGACCGAGAAATAGTGAGAAAGTGTAGAGGCCTACCTTTGGTTGCCAAAACATTGGGAAATCTGTTGCATTTCGAAAGAGATGCTAGAGAATGGGATAAGATATTGAGGTCCAACATATGGGATTTGCCAAGTGACAGCAGCATTCTTCAGTCTCTATTATTAAGCTACTACCAGCTCCCTTCACATCTGAAGCGGTGTTTTGCTTACTGCGCTACATTTCCAAGAAGGCATGAATTTACAAGAGCAGAAGTAGTTCGTTTATGGACCGCAAAGGAACTAATTCAGCCTAATGAAAATCGTCAGACTGAAGAACTGGGTGATGAGTACTTTCAGAACCTTGTATCAAGATCACTTTTTCAACGATCCAGTGCTAATCCGTCATCCTTTGTCATGCATGACCTCAATCATGATTTAGCTAAATTTGTCTATCGAACGTTCTTCCATCACAGAATTCGTCGCTATCCCCATCGAGGAGATACCAAGGATATTGCTGAGTGGCCCTTTATTCTCACGAACATCTTGCTAGAGATCTTGTTGCTGGCTTTTGACCAAATGGCTTCACCCAAAAAGCCACAATATGCGTTGGTTGCTGCATCCTTGTCTTTGGCAGTCTTGTTTGTTTGCATTTCTGAGCTTATTTACAAGGCAATGAAGAAAAACAGTGCTACTTTCTTTCAAATTCTGAGATGCATGCTTCATGGTTCTCTTGAGAAGAACCCATATACCTTCATTGACTGGTTTGGCCTACTCAGTGCCTTTGGTCAAGTTGTTGTCAGCAGCATAGCATACGTTTATATGCGTCAAGGTAAAGACAATCCAATTAAAGTATCCGTCGTATCCCTTAGTTTCATCATATGTTTGGCCTCTTCCAAATTAGTCAAGAATCCAAATGAGGCACAACTTCCAACTACAAGGGGCTATTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein RGA2, putative | Disease resistance protein RGA2, putative [Ricinus communis]. | MSSSEVIDFLIKSKKLEPGLLHRVNTTIIHVNAVLYDAEEKQITNPAVKNWLDDLQDCVFEIDDLLDEFAHKAARSKVLNFFSALIPFSYKDEDMVDKLEEILEKIDNLINLKDALKGIEGKPIIPQIPSTTCLVDESDIYGREADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNESVALVTLTIPIYHLRELSDDDCYTLFRRHAFDSTEGTGEHPQLEGLDREIVRKCRGLPLVAKTLGNLLHFERDAREWDKILRSNIWDLPSDSSILQSLLLSYYQLPSHLKRCFAYCATFPRRHEFTRAEVVRLWTAKELIQPNENRQTEELGDEYFQNLVSRSLFQRSSANPSSFVMHDLNHDLAKFVYRTFFHHRIRRYPHRGDTKDIAEWPFILTNILLEILLLAFDQMASPKKPQYALVAASLSLAVLFVCISELIYKAMKKNSATFFQILRCMLHGSLEKNPYTFIDWFGLLSAFGQVVVSSIAYVYMRQGKDNPIKVSVVSLSFIICLASSKLVKNPNEAQLPTTRGY |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF236 | 20-394 | PTHR23155:SF236,DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) | LLHRVNTTIIHVNAVLYDAEEKQITNPAVKNWLDDLQDCVFEIDDLLDEFAHKAARSKVLNFFSALIPFSYKDEDMVDKLEEILEKIDNLINLKDALKGIEGKPIIPQIPSTTCLVDESDIYGREADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNESVALVTLTIPIYHLRELSDDDCYTLFRRHAFDSTEGTGEHPQLEGLDREIVRKCRGLPLVAKTLGNLLHFERDAREWDKILRSNIWDLPSDSSILQSLLLSYYQLPSHLKRC |
| HMMPanther: PTHR23155 | 20-394 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LLHRVNTTIIHVNAVLYDAEEKQITNPAVKNWLDDLQDCVFEIDDLLDEFAHKAARSKVLNFFSALIPFSYKDEDMVDKLEEILEKIDNLINLKDALKGIEGKPIIPQIPSTTCLVDESDIYGREADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNESVALVTLTIPIYHLRELSDDDCYTLFRRHAFDSTEGTGEHPQLEGLDREIVRKCRGLPLVAKTLGNLLHFERDAREWDKILRSNIWDLPSDSSILQSLLLSYYQLPSHLKRC |
| superfamily: SSF52540 | 123-373 | SSF52540 | PIIPQIPSTTCLVDESDIYGREADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNESVALVTLTIPIYHLRELSDDDCYTLFRRHAFDSTEGTGEHPQLEGLDREIVRKCRGLPLVAKTLGNLLHFERDAREWDKILRSNIWDLPSD |
| Gene3D: G3DSA:3.40.50.300 | 142-282 | G3DSA:3.40.50.300 | GREADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNE |
| HMMPfam: PF00931 IPR002182
|
144-425 | NB-ARC,NBS NB-ARC
|
EADQEAIMELLLSNDQNDIVDVVPIVGLCGIGKTTLAQSVFNDYRVDQEFEIRAWVCVGGEFNVFQITKSFLEGITGKTCDYKELNPLQVELRDRLSMRKFLLVLDDIWNVNYEAWELLQKPLKHGRGGGKIIVTTRNESVALVTLTIPIYHLRELSDDDCYTLFRRHAFDSTEGTGEHPQLEGLDREIVRKCRGLPLVAKTLGNLLHFERDAREWDKILRSNIWDLPSDSSILQSLLLSYYQLPSHLKRCFAYCATFPRRHEFTRAEVVRLWTAKELIQPN |
| FPrintScan: PR00364 IPR000767
|
165-180 | DISEASERSIST Disease resistance protein
|
VVPIVGLCGIGKTTLA |
| FPrintScan: PR00364 IPR000767
|
238-252 | DISEASERSIST Disease resistance protein
|
RLSMRKFLLVLDDIW |
| FPrintScan: PR00364 IPR000767
|
336-350 | DISEASERSIST Disease resistance protein
|
CRGLPLVAKTLGNLL |
List of Contributions
There has not been any contribution yet.
