PRGDB00062323 (Disease resistance protein RPM1, putative)
| Disease resistance protein RPM1, putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 223529091 (EQ974267) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Ricinus communis |
DNA Sequence
ATGGGAAGCGTGCTGCGCCTCAAAAGAAAAGAGAGTGAATGGTTATCTGTCAAGGAAAGTGAGATTTGGGAGTTACCAAATGAAGGAAGCATGAATATTTTACTTGCTTTGAGGTTAAGTTATAATCACCTAGCACCGTATCTGAAACAATGTCTTGCATTTTGCTCACTATTTTCTAAAGATTACTGCATGGAGAAGGACAAAGGGATAGGATTATGGATGGCAAATGGCTTCATTACTTGCAAAGGAGAAATGGATTTGTACGATAAAGGCCATGAGACTTTTAGTGAATTAGTTTGGAGGTCGTTTTTCCAAGATGTGGAAGAGGATCTTTCAGGAAACACTGCATGTAAAATGCATGATTTTGTCCATGATCTTGCACAATCAATTATGAAAGACGAGTGCAAATTGATTGAACTCAACAAGGTCTCTGAAGTTCCAAAAAAGGCTCGGCATTTTAGCATTGTTAGGAATCCAGAGCAATCTTCTCCTCAGAGCAACAACCTCTTCAAGGATCAATCACTGCGTTCACTCCTTTGGATGGACTATTATTCCTCAAACCACCGGGTGCCTTCCTACTTGTCTGGCCAGAAGCATTTGAGAGTCTTGGATACCAGTGTCCTTTTGGATAAACTGCCGATGTCAAGTATCGGAAGTCTACCGGCATCAATAACCGCCCTCCAAAACTTGCAGACACTGCATCTTAAAAATTGCAATTATCTCTACAAATTACCAGAAGGTTTGAAGCACATGAAAAATCTCATGCAACCTGACATCACTGGATGTGATTCACTTAGATATATGCCTGCTGAAATGGGACAATTGACACGTCTGAGGAAGCTCAGCATCTTCGTTGTGGGCAACTACATTGGTTGTGGCATAGGAGAGCTGAAAGAATTGAATCTCGGGGGAGAGTTGTGCATTAAGAAGAAGAAAGAACTTCAGTCACTACAACTATCTTGGTCACCAGGAGGAAAAGACAATAGCAACCTATCAGAAAAGGTCATTGATAGCCTCCAACCCCATTCAAATCTAAAGAAGTTAGGCATATTTAAATATCCAGGTTCAAAATTTCCAAAATGGATGATGGAATTATTTCTACCAAATCTAGTGAAAATCGAGCTGTGTATTGGGAATGAGATATACGGGAATGGAGAAACTTCATTCCCATCATTGGAGAGCTTGAGTCTTGAATACGTGGGTGGTTTACAGGAATGGGCAATGGTCGGTGGTAGAGACATTTTTCCAGTCCTTGAGAGCTTAAGTGTCCGCTATTGTCTTCAATTGATGAATTACCGATTATGCCATTTCTCAAAAAATTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein RPM1, putative | Disease resistance protein RPM1, putative [Ricinus communis]. | MGSVLRLKRKESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNYRLCHFSKN |
| Disease resistance protein RPM1, putative | Disease resistance protein RPM1, putative [Ricinus communis]. | MGSVLRLKRKESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNYRLCHFSKN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-81 | NB-ARC,NBS NB-ARC
|
MGSVLRLKRKESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITC |
| HMMPfam: PF00931 IPR002182
|
1-81 | NB-ARC,NBS NB-ARC
|
MGSVLRLKRKESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITC |
| HMMPanther: PTHR23155:SF121 | 10-432 | PTHR23155:SF121,SUBFAMILY NOT NAMED | KESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNY |
| HMMPanther: PTHR23155 | 10-432 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | KESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNY |
| HMMPanther: PTHR23155:SF121 | 10-432 | PTHR23155:SF121,SUBFAMILY NOT NAMED | KESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNY |
| HMMPanther: PTHR23155 | 10-432 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | KESEWLSVKESEIWELPNEGSMNILLALRLSYNHLAPYLKQCLAFCSLFSKDYCMEKDKGIGLWMANGFITCKGEMDLYDKGHETFSELVWRSFFQDVEEDLSGNTACKMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNY |
| superfamily: SSF52058 | 118-433 | SSF52058,LRR | KMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNYR |
| superfamily: SSF52058 | 118-433 | SSF52058,LRR | KMHDFVHDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGCGIGELKELNLGGELCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYCLQLMNYR |
| Gene3D: G3DSA:3.80.10.10 | 124-292 | G3DSA:3.80.10.10 | HDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGC |
| Gene3D: G3DSA:3.80.10.10 | 124-292 | G3DSA:3.80.10.10 | HDLAQSIMKDECKLIELNKVSEVPKKARHFSIVRNPEQSSPQSNNLFKDQSLRSLLWMDYYSSNHRVPSYLSGQKHLRVLDTSVLLDKLPMSSIGSLPASITALQNLQTLHLKNCNYLYKLPEGLKHMKNLMQPDITGCDSLRYMPAEMGQLTRLRKLSIFVVGNYIGC |
| Gene3D: G3DSA:3.80.10.10 | 306-426 | G3DSA:3.80.10.10 | LCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYC |
| Gene3D: G3DSA:3.80.10.10 | 306-426 | G3DSA:3.80.10.10 | LCIKKKKELQSLQLSWSPGGKDNSNLSEKVIDSLQPHSNLKKLGIFKYPGSKFPKWMMELFLPNLVKIELCIGNEIYGNGETSFPSLESLSLEYVGGLQEWAMVGGRDIFPVLESLSVRYC |
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