PRGDB00063568 (putative Pto-like serine/threonine kinase)

putative Pto-like serine/threonine kinase
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	15054732 (AF288541)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Solanum berthaultii
	Comment?

Solanum berthaultii berBD3 putative Pto-like serine/threonine kinase gene, partial cds.

DNA Sequence

TTTAAACTCGAGTTATCGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAACAACTTCGATGAGAAGTTTCACATTGGATTGGGTGGCTTTGGGAAAGTTTACAGGGGTGTTTTGCGTGATGGAACAAAGGTGGCCCTGAAGAGGTGTAAGCGTGAGTCCTCACAAGGTATTGAAGAGTTCCAAACAGAAATTGAGATTCTCTCTTTTTGCAGCCATCCGCATTTGGTTTCATTGATAGGATACTGTGATGAAAGAAATGAGATGATTCTAGTTTATGACTACATTGAGAATGGGAACCTCAGGAGCCATTTGTATGGGTCAGATCTACCAAGTATGAGCTGGGAGCAGAGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTGCATTACCTTCATACTAGTGCAGTTATACATCGTGATGTCAAGTCTATAAACATGTTGCTTGATGAGAATTTTGTGGCAAAAATTACTGATTTTGGACTATCCAAGAAAGGGACTGAGCTTGATCAAACCCATCTTAGCACCCTTGTGCAAGGAACTATAGGCTACCTTGACCCTGAATATTTTATAAGGGGACAACTGACAGAAAAAT

Protein sequences

Name	Description	Sequence
putative Pto-like serine/threonine kinase	putative Pto-like serine/threonine kinase [Solanum berthaultii].	LNSSYRVPFESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK

Domains

Domain	Start-End	Description	Sequence
superfamily: SSF56112 IPR011009	1-204	Protein kinase-like (PK-like) Protein kinase-like domain	LNSSYRVPFESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK
HMMPanther: PTHR24420:SF785	10-204	SUBFAMILY NOT NAMED	ESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK
HMMPanther: PTHR24420	10-204	FAMILY NOT NAMED,FAMILY NOT NAMED	ESFRVPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK
Gene3D: G3DSA:3.30.200.20	14-87	no description	VPFVDLQEATNNFDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIG
ProfileScan: PS50011 IPR000719	26-204	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	FDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK
HMMSmart: SM00220 IPR002290	26-204	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	FDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTEK
HMMSmart: SM00219 IPR020635	26-201	Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain	FDEKFHIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQL
HMMPfam: PF07714 IPR001245	31-203	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase	HIGLGGFGKVYRGVLRDGTKVALKRCKRESSQGIEEFQTEIEILSFCSHPHLVSLIGYCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTE
PatternScan: PS00107 IPR017441	32-54	PROTEIN_KINASE_ATP Protein kinase, ATP binding site	IGLGGFGKVYRGVLRDGTKVALK
Gene3D: G3DSA:1.10.510.10	88-203	no description	YCDERNEMILVYDYIENGNLRSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTSAVIHRDVKSINMLLDENFVAKITDFGLSKKGTELDQTHLSTLVQGTIGYLDPEYFIRGQLTE
PatternScan: PS00108 IPR008271	143-155	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	VIHRDVKSINMLL

List of References

V G Vleeshouwers, A Martens, W van Dooijeweert, L T Colon, F Govers, S Kamoun
Ancient diversification of the Pto kinase family preceded speciation in Solanum.
Mol. Plant Microbe Interact.: 2001, 14(8);996-1005
PubMed:11497472 WorldCat.org DOI (P p)

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Analyses

Blast

Blast matches against Reference R-Genes. Show