PRGDB00063898 (Zm.685)

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Zm.685
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 223945930 (BT062352)
Gene Class Mlo-like
Domain Type MLO
Gene Species Zea mays

Comment?

Zea mays full-length cDNA clone ZM_BFb0284L02 mRNA, complete cds

DNA Sequence

TCGGGAATTCTTGCATGCCCGTGCTACGTCGTCCATCGTCTCCCCGGCCGGCTGGAGCTAGCTAGGGCCCGGTGATCGTATCGTCGATTGGAAGTGAAGATCAAGCGATCGATAGAATAAATTAAAGGCGCGGGGGCAACAACAAGAATGGGGGGCGGTGGCGGTGGCGGCAACTCGCGGGAGCTTGACCAGACGCCGACATGGGCGGTGGCGTCGGTGTGCGGCGTGATCGTGCTCATCTCCATCCTGCTGGAGAAGGGGCTCCACCACGTGGGCGAGTTCTTCTCCCACCGCAAGAAGAAGGCCATGGTGGAGGCCCTGGAGAAGGTGAAGGCGGAGCTCATGGTGCTGGGCTTCATCTCGCTCCTCCTCGTGTTCGGCCAGAACTACATCATCAAGGTCTGCATCAGCAACCACGCCGCCAACACCATGCTCCCCTGCAAGCTCGAGGCCGCCGCCGTCGAGGGCAAGGACGGCCACGGCAAGGAGGCCGCCGCCGTGGTCGCTGGCAAgaagaaggtcgccgtcgccgtccctggaaagaagaagaagaaggccgccgccgccgccgACCATCTTGGCGGTGTGGTGGACTGGCCGCCGCCCTACTACGCGCACAACGCCAGGATGCTGGCGGAGGCGAGCATGGCGACCAAGTGCCCCGAGGGGAAAGTGCCGCTCATCTCCATCAACGCCCTGCACCAGCTGCACATCTTCATCTTCTTCCTCGCCGTCTTCCACGTCTCCTACAGCGCAATCACCATGGCGCTCGGCAGGGCCAAGATACGTGCATGGAAAGAGTGGGAGAAAGAAGCTGCAGGACAAGACTACGAGTTCTCACATGACCCGACGCGGTTCAGGTTCACCCACGAGACTTCCTTCGTGAGGCAGCATATGAATGTGCTGAACAAGTTCCCAGCATCATTCTACATCAGCAACTTCTTCCGGCAGTTCTTCAGGTCCGTGAGGCAGGCAGACTACTGCGCGCTGCGCCACAGCTTTGTCAACGTCCATCTGGCCCCTGGCAGCAAGTTTGATTTCCAGAAGTACATCAAGCGGTCTCTGGAGGATGACTTCAAGGTGATCGTGGGGATCAGTCCTCCTCTGTGGGCTTCTGCTCTCATCTTCCTCTTCCTCAACGTCAATGGATGGCACACCATGCTCTGGATCTCCATCATGCCGGTGGTGATCATCCTGTCGGTGGGGACGAAGCTGCAGGGCATCATCTGCCGCATGGCGATCGACATCACGGAGCGCCACGCCGTCATCCAGGGCATCCCGATGGTGCAAGTCAGCGACTCCTACTTCTGGTTCGCACGCCCCACCTTCGTGCTCTTCCTCATCCACTTCACCCTCTTCCAGAATGGCTTCCAGATCATCTACTTCCTCTGGATTCTGTATGAGTACGGCATGGACTCGTGCTTCAACGACTCCGAAGAGTTCGTCTTTGCACGACTCTGCCTTGGCGTGGTTGTCCAGGTGCTGTGCAGCTACGTGACGCTCCCGCTGTACGCGCTCGTCTCCCAAATGGGCTCCACCATGAAGCAGTCCATCTTCGACGAGCAGACCTCCAAGGCGCTCAAGAACTGGCGCGCCGGCGCCAAGAAGAAGGCTCCCACCGGCGGCTCCAAGCACGGCGGTGGTGGCTCCCCCACCGCCGGCGGCAGCCCCACCAAGGCCGACGGCGACGCGTAGAGAGGAACACGCTAACTTTAATTTCTGTGTGCTTAATTGCCTAGGCTCGTTAAGTCAGAACATGCATGCATGTAACACCACTGCTGGTTTTCATATAGTGTCGACAGATGGTCAACGTACTTTTTGCGATCCCACTTGTAttttttttttACAATGAAGCACCCGTCCGCGTCCGTGGACACTGCAAGTGCATTGCC


Protein sequences

Name Description Sequence
Zm.685 translated coding region predicted by ESTScan from UniGene Zm.685

MGGGGGGGNSRELDQTPTWAVASVCGVIVLISILLEKGLHHVGEFFSHRKKKAMVEALEKVKAELMVLGFISLLLVFGQNYIIKVCISNHAANTMLPCKLEAAAVEGKDGHGKEAAAVVAGKKKVAVAVPGKKKKKAAAAADHLGGVVDWPPPYYAHNARMLAEASMATKCPEGKVPLISINALHQLHIFIFFLAVFHVSYSAITMALGRAKIRAWKEWEKEAAGQDYEFSHDPTRFRFTHETSFVRQHMNVLNKFPASFYISNFFRQFFRSVRQADYCALRHSFVNVHLAPGSKFDFQKYIKRSLEDDFKVIVGISPPLWASALIFLFLNVNGWHTMLWISIMPVVIILSVGTKLQGIICRMAIDITERHAVIQGIPMVQVSDSYFWFARPTFVLFLIHFTLFQNGFQIIYFLWILYEYGMDSCFNDSEEFVFARLCLGVVVQVLCSYVTLPLYALVSQMGSTMKQSIFDEQTSKALKNWRAGAKKKAPTGGSKHGGGGSPTAGGSPTKADGDAXRGTR

Domains

Domain Start-End Description Sequence

Seg: seg
2-8 seg

GGGGGGG

HMMPfam: PF03094
IPR004326
10-502 Mlo
Mlo-related protein

SRELDQTPTWAVASVCGVIVLISILLEKGLHHVGEFFSHRKKKAMVEALEKVKAELMVLGFISLLLVFGQNYIIKVCISNHAANTMLPCKLEAAAVEGKDGHGKEAAAVVAGKKKVAVAVPGKKKKKAAAAADHLGGVVDWPPPYYAHNARMLAEASMATKCPEGKVPLISINALHQLHIFIFFLAVFHVSYSAITMALGRAKIRAWKEWEKEAAGQDYEFSHDPTRFRFTHETSFVRQHMNVLNKFPASFYISNFFRQFFRSVRQADYCALRHSFVNVHLAPGSKFDFQKYIKRSLEDDFKVIVGISPPLWASALIFLFLNVNGWHTMLWISIMPVVIILSVGTKLQGIICRMAIDITERHAVIQGIPMVQVSDSYFWFARPTFVLFLIHFTLFQNGFQIIYFLWILYEYGMDSCFNDSEEFVFARLCLGVVVQVLCSYVTLPLYALVSQMGSTMKQSIFDEQTSKALKNWRAGAKKKAPTGGSKHGGGGSP

Seg: seg
112-141 seg

GKEAAAVVAGKKKVAVAVPGKKKKKAAAAA

Seg: seg
488-510 seg

KAPTGGSKHGGGGSPTAGGSPTK






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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