PRGDB00063995 (Zm.16191)
| Zm.16191 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 194688727 (BT033443) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Zea mays |
DNA Sequence
TTGCTACAGCGGGGAGACGGCTAGGCCAATAAAAACACAGGCAATCGAATAGAAGTTTTTTTAAAAAAGGAAGGGGAGAAGAGCTAGAGGGGATGGGTGGCGGCACGGTGGTGTGTGTCACCGGCGGCAGCGGCTACCTCGGGAGCTGGCTCGTCAGGAAGCTCCTCGGCAGAGGCTGCGTCGTCCACGCCACCCTGCGGAGCCTCGCGGACGAGAAGAAGACGGGGCTGCTCCGGGCGCTCCCCGGCGCGGCGGAGCGGCTGCGGCTGTTCGAGGCGGACATGTACGACGCCGACACCTTCGAGCCCGCCATCGCCGGCTGCCACTTCGTCTTCCTCGTCGCCACGCCCCTGACGCACGACCCCACCAGCACCAAGTACAAGAACACGACGGAGGCGGCGGTGGACGCGGCGCGCATCATCCTCCGGCAGTGCGCGCTGTCCGGCACGGTGAAGCGCGTCATCCACACGGCCTCGGTCACGGCCGCGTCGCCGCTCAAGGAGGACGGCAGCGGGTACAAGGACTTCGCCGACGAGTCCAATTGGACGCCGCTCAACCTCTCCTACGAATTCACCAACGCTTACCTGGACGACTACGTGCGGTCCAAGACGCTGTCGGAGAAGGAGCTACTGAGCTActcctctttctcatcctcctcctcctcctcctcctcctccAAGGAAGACGACCGGCCCCAGGCGTTGGAGGTGGTCACCCTAGCGTGCGGGCTCGTCGGCGGCGACAGCATCCAGACGTACCTGTGGGGCAGCTACGCCGCGATCGTCGCGCCGCTGACGGGGCAGGCGGTCAGTCACAACGCCCTCCTCTTCTTGCAGGCGCTGCTGGGCTCCGTGCCGCTGGTGCACGTGGAGGACGTCTGCGAGGCCCACGTCTTCTGCATGGAGCAGGAGTCCATGGCCGGCCGCTTCCTCTGCGCCGCCGGGTACCCCAACATGCGTGACATGGTCGACCACTTTGCCGCAAAGCACCCCGACCTCAAGATACAGCTGACTCAGGTGACCGGAGAAGGTGTCAGGATTCAGCCCAACACCAGCAAGCTGGAGGACTTGGGGTTCAGATTCAAGTACGGAGTGGAGGAGACGCTGGACTGCAGCGTCGAGTGCGCCAAGAGGCTGGGAGAGCTCTAGATGCATGCTACACATGCATGCGCAGCATTGGAATTCAGCGACTGTGATACGAGTAAGTATGGTGGTATCATGTTAATACGTGTGTATATTGGGTCGATTCATCCCACCAGAGTTTGAACTGTTCCATATTCCCATCTGTTTCCCGTGATCATAAAATAAAAACAGTAAAATACATCAACGGTCATCAAACTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.16191 | translated coding region predicted by ESTScan from UniGene Zm.16191 | MGGGTVVCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMAGRFLCAAGYPNMRDMVDHFAAKHPDLKIQLTQVTGEGVRIQPNTSKLEDLGFRFKYGVEETLDCSVECAKRLGELXMHATHACAALEFSDCDTSKYGGIMLIRVYIGSIHPTRV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 2-14 | seg | GGGTVVCVTGGSG |
| superfamily: SSF51735 | 4-347 | NAD(P)-binding Rossmann-fold domains | GTVVCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMAGRFLCAAGYPNMRDMVDHFAAKHPDLKIQLTQVTGEGVRIQPNTSKLEDLGFRFKYGVEETLDCSVECAKR |
| Gene3D: G3DSA:3.40.50.720 IPR016040
|
5-297 | no description NAD(P)-binding domain
|
TVVCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMAGRFLCAAGYPNMRDMVDHFAA |
| HMMPanther: PTHR10366:SF81 | 7-371 | OS07G0601100 PROTEIN,OS07G0601100 PROTEIN | VCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMAGRFLCAAGYPNMRDMVDHFAAKHPDLKIQLTQVTGEGVRIQPNTSKLEDLGFRFKYGVEETLDCSVECAKRLGELXMHATHACAALEFSDCDTSK |
| HMMPfam: PF01370 IPR001509
|
7-276 | Epimerase NAD-dependent epimerase/dehydratase
|
VCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMA |
| HMMPanther: PTHR10366 | 7-371 | FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE | VCVTGGSGYLGSWLVRKLLGRGCVVHATLRSLADEKKTGLLRALPGAAERLRLFEADMYDADTFEPAIAGCHFVFLVATPLTHDPTSTKYKNTTEAAVDAARIILRQCALSGTVKRVIHTASVTAASPLKEDGSGYKDFADESNWTPLNLSYEFTNAYLDDYVRSKTLSEKELLSYSSFSSSSSSSSSSKEDDRPQALEVVTLACGLVGGDSIQTYLWGSYAAIVAPLTGQAVSHNALLFLQALLGSVPLVHVEDVCEAHVFCMEQESMAGRFLCAAGYPNMRDMVDHFAAKHPDLKIQLTQVTGEGVRIQPNTSKLEDLGFRFKYGVEETLDCSVECAKRLGELXMHATHACAALEFSDCDTSK |
| Seg: seg | 171-197 | seg | SKTLSEKELLSYSSFSSSSSSSSSSKE |
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