PRGDB00064215 (Zm.37493)
| Zm.37493 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 224030892 (BT067625) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
TTTTACATGTCGCCCTTCTTCATCCTCCCAACACTCAAGGCCACAAACCAAATGCTGCTAACTACTCCAGCTAGCTAGCAACAATAATGGCGGCCTGCCGTCCCTCCGGCCTCAGCGTCTTGTGCAGCCTCTACCGTCTCTACATCTGCATGCTGTTCATCCATGTCCCTCGGGCTCACTCGCTGTCCTTCGACCTCAGCTTCTCCAAACCCCAGAGCCCAGACCTCTCCTCCCAGAAGATAAACTTCAACGGCGACGCGTACCCCACTCCAGAAACGCTCGAGCTGACGCGAAACCAGCATGACCAAAGCAGCACCAACAGCATCGGCCGGGCGACGTACGCGCAGCCGGTGCCGCTGTGGGATGGCGCCACCGGCGAGACGGCCAGCTTCACCACCACCTTCACCTTCCGGATCAGGCCGGACTCGTGGAGCCCGTACCCCGGCGACGGGATGGCGTTCTTCCTCGGCCACTACGGGTCAGATATCCCCGTCCAGAGCGGCGGCGGCATGCTCGGCCTCGTCCCGACCCACACCAACGGCACCGGAAACGGCACCGTCGTCGCCGTCGAGTTCGACACCTTCCAGAACCCGACGAACGACGACATCAGCAGCAACCACGTGGGCATCGACGTCGACTCCCTCAACTCCACGGCGTCCACGGACACCACCTCGCCGACCAAGAACCTCACGTCCGGTTACCTGATGGCGGCCACCGTAAGGTACGAGAACGTCACCAGGTTGCTCGCCTTGGAGCTCACCGTCAACGACACGTCCTACTACGTCAACGCAACTGTCGATCTCAAGGGCTACCTACCGGAGCGTGTAGCCGTCGGCTTCTCCGCGGCGACTGGAAATGGCGGCGAGCAGCACCAGGTGCTGTCATGGTCATTCACGTCCACTCTGCCGGAACCACCGGCACCGGCACCGGCACCGCCGCCGCATGCGACACCAGACAACAACCAGCCTCCCAAGAAGAAGAGATCAGTCGGGACCACGGGCCTGATAATCGCCGTGCTTGTGCCTCTGCTATCTCTCCTGGCGTGTGCGGCAGGCGTGCTGGCAAGGCGAAAACTCAGGGgaagaagaagaagaagaCCGCCAAACGGTAGCAGCGACGACGACAACGATTACCAAGAACAGGACAACGGCAGCAGGGCGGAGCTCGAGAGAGGAGTGGCTGCCACCGGCCCCCGGCGGTACGCGTACCGCGACCTGGCCGCCGCCACCGACAACTTCGCCGAGGACGGCAAGCTCGGTCGCGGTGGCTTCGGGAGCGTCTACAGGGGCAAACTCACCGTCGCCGGCGAAGAGCGGCCCGTGGCGATCAAGGTGTTGTCGTCGGAGTCGTCGGCGCAGGGCAGGAAGGAGTTCGAGGCGGAGGTGAGGATCATCAGCCGGCTCAAGCATCGCAACCTCGTGCAGCTCCTGGGCTGGTGCGACAGCCGGCACGGCCTCCTGCTCGTCTACGAGCTGGTGGCCCAGGGCAGCCTCGACAGGCATCTCCACGGCAGCGAGCGCTTCTTGGCGTGGCCGGACAGGCACCAGATCATCCTCGGCCTGGGGTCGGCGCTGCGGTACCTCCACCAGGAGTGGGAGCAGCGCGTGGTGCACGGCGACATCAAGCCCAGCAACATCATGCTGGACGACTCGCTGGGCGCCAAGCTCGGCGACTTCGGCCTGGCCCGGCTCGGAGACCACGGCGGGCGCTGGCACACCACCAAGGCCGTGCTCGGCACCGCGGGGTACATCGACCCGGAGTTCGTCAACACGCGCCACCCGAGCACCCACGCCGACGTGTACAGCTTCGGCATCGTCCTCCTCGAGGTCGTCTCCGGCCGGTCCCCGGTGGTCCTGCTGCCCGGCGAGCCGCCCTTCGTTCTGCTCAAGTGGGTGTGGGGCCTGTACGGACGGAACGCGGTCCTCGACGCGGCGGACGAGCAGCTGAGGGGCGGCGGCGACGACGACGAGTGCATCGAGAGGGCACTCGTCGTCGGGCTCTGGTGCGCCCACCCTGAGCAGAGCGAGCGGCCGTCCATCGCGCAGGCCATGCACGTCCTGCAGTCGGCGGACGCCAGGCTGCCGGCGCTCCCGCCGCAGATGTACAAGACGGCGTCGGACCTCGCCGTCACCGGACGTTCCTACGGCGTTTTGTCCGTGGAAAGCTACAGCGGCGGTGACTCCTCTACGACGACTACGACCGCCGGCTACTCCAAAACTTCTTCAGGCTCGTCGACCACGGCCTTGCTCCGAGATTCAAAAGAGAGACCTTGATTCTGCaaaaataaaataaaaaatcctatgtgggagctgaactgtaaaaaaaaTGTGTTTTCAGTTTTGTTAATTTGGGCTGAAGCCTGAAGCTAACACTTTCAGTTTTGAATCTTCCTTCACACCGGTTGTCCATATTTCTTTTGCGGCAATAGAAAAATTCAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.37493 | translated coding region predicted by ESTScan from UniGene Zm.37493 | MAACRPSGLSVLCSLYRLYICMLFIHVPRAHSLSFDLSFSKPQSPDLSSQKINFNGDAYPTPETLELTRNQHDQSSTNSIGRATYAQPVPLWDGATGETASFTTTFTFRIRPDSWSPYPGDGMAFFLGHYGSDIPVQSGGGMLGLVPTHTNGTGNGTVVAVEFDTFQNPTNDDISSNHVGIDVDSLNSTASTDTTSPTKNLTSGYLMAATVRYENVTRLLALELTVNDTSYYVNATVDLKGYLPERVAVGFSAATGNGGEQHQVLSWSFTSTLPEPPAPAPAPPPHATPDNNQPPKKKRSVGTTGLIIAVLVPLLSLLACAAGVLARRKLRGRRRRRPPNGSSDDDNDYQEQDNGSRAELERGVAATGPRRYAYRDLAAATDNFAEDGKLGRGGFGSVYRGKLTVAGEEXARGDQGVVVGVVGAGQEGVRGGGEDHQPAQASQPRAAPGLVRQPARPPARLRAGGPGQPRQASPRQRALLGVAGQAPDHPRPGVGAAVPPPGVGAARGARRHQAQQHHAGRLAGAKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVLQSADARLPALPPQMYKTASDLAVTGRSYGVLSVESYSGGDSSTTTTTAGYSKTSSGSSTTALLRDSKERP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF49899 IPR008985
|
36-273 | Concanavalin A-like lectins/glucanases Concanavalin A-like lectin/glucanase
|
DLSFSKPQSPDLSSQKINFNGDAYPTPETLELTRNQHDQSSTNSIGRATYAQPVPLWDGATGETASFTTTFTFRIRPDSWSPYPGDGMAFFLGHYGSDIPVQSGGGMLGLVPTHTNGTGNGTVVAVEFDTFQNPTNDDISSNHVGIDVDSLNSTASTDTTSPTKNLTSGYLMAATVRYENVTRLLALELTVNDTSYYVNATVDLKGYLPERVAVGFSAATGNGGEQHQVLSWSFTSTL |
| Gene3D: G3DSA:2.60.120.200 IPR013320
|
36-278 | no description Concanavalin A-like lectin/glucanase, subgroup
|
DLSFSKPQSPDLSSQKINFNGDAYPTPETLELTRNQHDQSSTNSIGRATYAQPVPLWDGATGETASFTTTFTFRIRPDSWSPYPGDGMAFFLGHYGSDIPVQSGGGMLGLVPTHTNGTGNGTVVAVEFDTFQNPTNDDISSNHVGIDVDSLNSTASTDTTSPTKNLTSGYLMAATVRYENVTRLLALELTVNDTSYYVNATVDLKGYLPERVAVGFSAATGNGGEQHQVLSWSFTSTLPEPPA |
| HMMPfam: PF00139 IPR001220
|
45-270 | Lectin_legB Legume lectin, beta chain
|
PDLSSQKINFNGDAYPTPETLELTRNQHDQSSTNSIGRATYAQPVPLWDGATGETASFTTTFTFRIRPDSWSPYPGDGMAFFLGHYGSDIPVQSGGGMLGLVPTHTNGTGNGTVVAVEFDTFQNPTNDDISSNHVGIDVDSLNSTASTDTTSPTKNLTSGYLMAATVRYENVTRLLALELTVNDTSYYVNATVDLKGYLPERVAVGFSAATGNGGEQHQVLSWSFT |
| Seg: seg | 102-108 | seg | FTTTFTF |
| Seg: seg | 150-159 | seg | TNGTGNGTVV |
| PatternScan: PS00307 IPR019825
|
159-165 | LECTIN_LEGUME_BETA Legume lectin, beta chain, Mn/Ca-binding site
|
VAVEFDT |
| PatternScan: PS00308 IPR000985
|
243-252 | LECTIN_LEGUME_ALPHA Legume lectin, alpha chain, conserved site
|
LPERVAVGFS |
| Seg: seg | 274-289 | seg | PEPPAPAPAPPPHATP |
| Seg: seg | 327-337 | seg | RRKLRGRRRRR |
| Gene3D: G3DSA:3.30.200.20 | 368-405 | no description | GPRRYAYRDLAAATDNFAEDGKLGRGGFGSVYRGKLTV |
| superfamily: SSF56112 IPR011009
|
370-411 | Protein kinase-like (PK-like) Protein kinase-like domain
|
RRYAYRDLAAATDNFAEDGKLGRGGFGSVYRGKLTVAGEEXA |
| ProfileScan: PS50011 IPR000719
|
384-668 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FAEDGKLGRGGFGSVYRGKLTVAGEEXARGDQGVVVGVVGAGQEGVRGGGEDHQPAQASQPRAAPGLVRQPARPPARLRAGGPGQPRQASPRQRALLGVAGQAPDHPRPGVGAAVPPPGVGAARGARRHQAQQHHAGRLAGAKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVLQSADARLPAL |
| HMMSmart: SM00220 IPR002290
|
384-658 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FAEDGKLGRGGFGSVYRGKLTVAGEEXARGDQGVVVGVVGAGQEGVRGGGEDHQPAQASQPRAAPGLVRQPARPPARLRAGGPGQPRQASPRQRALLGVAGQAPDHPRPGVGAAVPPPGVGAARGARRHQAQQHHAGRLAGAKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVL |
| Seg: seg | 411-435 | seg | ARGDQGVVVGVVGAGQEGVRGGGED |
| Seg: seg | 437-448 | seg | QPAQASQPRAAP |
| Seg: seg | 452-471 | seg | RQPARPPARLRAGGPGQPRQ |
| Seg: seg | 490-525 | seg | PRPGVGAAVPPPGVGAARGARRHQAQQHHAGRLAGA |
| superfamily: SSF56112 IPR011009
|
525-666 | Protein kinase-like (PK-like) Protein kinase-like domain
|
AKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVLQSADARLP |
| HMMPfam: PF00069 IPR017442
|
525-588 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
AKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPV |
| Gene3D: G3DSA:1.10.510.10 | 525-658 | no description | AKLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVL |
| HMMPanther: PTHR24420:SF568 | 526-725 | OS09G0341100 PROTEIN | KLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVLQSADARLPALPPQMYKTASDLAVTGRSYGVLSVESYSGGDSSTTTTTAGYSKTSSGSSTTALLRDSK |
| HMMPanther: PTHR24420 | 526-725 | FAMILY NOT NAMED,FAMILY NOT NAMED | KLGDFGLARLGDHGGRWHTTKAVLGTAGYIDPEFVNTRHPSTHADVYSFGIVLLEVVSGRSPVVLLPGEPPFVLLKWVWGLYGRNAVLDAADEQLRGGGDDDECIERALVVGLWCAHPEQSERPSIAQAMHVLQSADARLPALPPQMYKTASDLAVTGRSYGVLSVESYSGGDSSTTTTTAGYSKTSSGSSTTALLRDSK |
| Seg: seg | 693-718 | seg | SYSGGDSSTTTTTAGYSKTSSGSSTT |
List of Contributions
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