PRGDB00064251 (Zm.66619)
| Zm.66619 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 194704319 (BT041239) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
GAAGCCAAAAGCAACCAAACCCACCCGGCCACCCCCCGAGCCCGAAGGCAGGCCTCTTTCTTCTTCTTCCTCCTCTTCCCCTGCTCGGTCGGCTACTCCTACTGTCCGGGGAACCCAGCCCAGCCCAGCACCTGAACCccacaccacacacacagggttgcccacccacgccacgcacGCGCAGCCGCGGCGGAAGCCACCGGGGGGTGGGCTCCGATGGGCTGCTGCGGCTCCTCGCAGCGGGCGGGGACGCACCCGGAGAAGAAGCCGCCGGGGGCGCTCCCCCCGCACCGTCCCTCCTACTCGCTCAACCAGCACCAggcgccggcgccgccgcctccctccgcggctcgcgccggcgcccgccaggtgccgccgcTCAAGGAGTTCTCGCTCGCGGAGCTGCGCGCCGCCACGGCCGGCTTCGCGGCGGGGAACATCGTGTCGGAGAGCGGCGAGAAGGCGCCCAATTTCGTGTACAGGGGCCGCCTCGACGCCGGCCGCCGCGCGATCGCCGTCAAGAAGTTCACCAAGATGGCGTGGCCCGATCCCAAGCAGTTCGCGGAGGAGGCCAAGGGCGTCGGGAAGCTGCGCCACTGCCGCCTGGCCAACCTCATCGGCTACTGCTGCGACGGGGACGAGCGGCTGCTCGTCGCCGAGTTCATGCCCAACGACACGCTCGCCAAGCACCTCTTCCACTGGGAAAACCAGACAATTGAATGGGCTATGCGTCTGAGAGTTGCATACTACATCGCTGAAGCACTGGAGTATTGCAGCACTGAGGGAAGGCCTTTGTACCACGACCTAAATGCATATAGGGTCCTCTTTGATGAGAATGGTGATCCTCGCCTTTCATGCTTTGGCCTGATGAAAAACAGTAGGGATGGGAAAAGCTATAGCACAAATCTTGCATATACACCTCCAGAATATTTAAGAAATGGAAGAGTAACATCAGAAAGTGTCATATTCAGCTTTGGCACTATACTGCTGGACCTCCTAAGTGGAAAGCGTATACCTCCTTCCCGTGCTCTTGATATGATAAAAGGCAACAATATCCAAGTACTGATGGATTCACATTTGGAGGGAAACTACTCAACAGATGAGGCAACCACATTGGTTGACCTGGCCTCCCAGTGCCTACAGTATGAGCCTAGGGATCGGGCCAACACTAAAAAGCTGGTTTCCGTACTCGAGCCCTTGCAAATAAAATCAGAGGTACCATCCTACGAGATGCTTGGCATTCCAAAACATGAGGAAGAAGCGCCTCCCCCTCCACAACCGCAGCGCCCTCTCTCTCCCATGGGTGAAGCCTGTTCTAGGACGGATCTGACAGCTATCCATCAAATTCTAGTGAACACGCATTACAGGGACGATGAAGGGAGCAACGAGCTATCGTTCCAGGAATGGACGCAGCAGATGAGGGACATGCTGGAAGCTAGGAAGCGTGGGGACTTCGCCTTTCGCGATAAAGATTTCAAGGCAGCCATAGATTGCTACACGCAGTTCGTTGACGTGGGGACGATGGTATCGCCAACGGTGTACGCGAGGCGGAGCCTGTGCCACCTCATGTGTGACCAGCCTGACGCCGCCCTCCGCGACGCAATGCAGGCGCAGTGCGTGTACCCGGACTGGCCAACCGCGTTCTACATGCAAGCTGTCGCGCTCGCGAAGCTGAACATGCAGAGCGATGCCACGGACATGTTGAACGAGGCATCGCAGCTCGAAGAGAAGCGGCAGAAGAACACAAAACCCTGATGATGGCTTGTTCCTGGTCCAGGGGTTGGGAATGTAGCTGGGGGAGTGTGCTGCAGAGTCCTGCGATTGTAACTACCTGGTTTCGCATTTCTGTCATGCAttttttttGGGCCCGTGTACATGTTACATCGACGAAAGTCGAAACAGGCAGAATGCAAGGGGATTTTTTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.66619 | translated coding region predicted by ESTScan from UniGene Zm.66619 | XKPKATKPTRPPPEPEGRPLSSSSSSSPARSATPTVRGTQPSPAPEPHTTHTGLPTHATHAQPRRKPPGGGLRWAAAAPRSGAGTHPEKKPPGALPPHRPSYSLNQHQAPAPPPPSAARAGARQVPPLKEFSLAELRAATAGFAAGNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQIKSEVPSYEMLGIPKHEEEAPPPPQPQRPLSPMGEACSRTDLTAIHQILVNTHYRDDEGSNELSFQEWTQQMRDMLEARKRGDFAFRDKDFKAAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWPTAFYMQAVALAKLNMQSDATDMLNEASQLEEKRQKNTKPXXWLVPGPGVGNVAGGVCCRVLRL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 2-34 | seg | KPKATKPTRPPPEPEGRPLSSSSSSSPARSATP |
| Seg: seg | 109-122 | seg | APAPPPPSAARAGA |
| superfamily: SSF56112 IPR011009
|
115-421 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PSAARAGARQVPPLKEFSLAELRAATAGFAAGNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQIKSEVPSYEMLGIPKHEEE |
| HMMPanther: PTHR24420 | 123-477 | FAMILY NOT NAMED,FAMILY NOT NAMED | RQVPPLKEFSLAELRAATAGFAAGNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQIKSEVPSYEMLGIPKHEEEAPPPPQPQRPLSPMGEACSRTDLTAIHQILVNTHYRDDEGSNELSFQEWTQQMRDM |
| HMMPanther: PTHR24420:SF885 | 123-477 | SUBFAMILY NOT NAMED | RQVPPLKEFSLAELRAATAGFAAGNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQIKSEVPSYEMLGIPKHEEEAPPPPQPQRPLSPMGEACSRTDLTAIHQILVNTHYRDDEGSNELSFQEWTQQMRDM |
| Gene3D: G3DSA:3.30.200.20 | 128-222 | no description | LKEFSLAELRAATAGFAAGNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEF |
| ProfileScan: PS50011 IPR000719
|
146-402 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
GNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQ |
| HMMSmart: SM00220 IPR002290
|
146-401 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
GNIVSESGEKAPNFVYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPL |
| HMMPfam: PF07714 IPR001245
|
160-398 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
VYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVL |
| HMMSmart: SM00219 IPR020635
|
160-398 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
VYRGRLDAGRRAIAVKKFTKMAWPDPKQFAEEAKGVGKLRHCRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVL |
| Gene3D: G3DSA:1.10.510.10 | 223-404 | no description | MPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTILLDLLSGKRIPPSRALDMIKGNNIQVLMDSHLEGNYSTDEATTLVDLASQCLQYEPRDRANTKKLVSVLEPLQIK |
| Seg: seg | 423-431 | seg | PPPPQPQRP |
| superfamily: SSF48452 | 468-578 | TPR-like | QEWTQQMRDMLEARKRGDFAFRDKDFKAAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWPTAFYMQAVALAKLNMQSDATDMLNEASQLEEK |
| HMMPfam: PF13414 | 478-538 | TPR_11,TPR repeat | LEARKRGDFAFRDKDFKAAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA |
| Gene3D: G3DSA:1.25.40.10 IPR011990
|
479-578 | no description Tetratricopeptide-like helical
|
EARKRGDFAFRDKDFKAAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWPTAFYMQAVALAKLNMQSDATDMLNEASQLEEK |
| Coil: coil | 558-579 | coiled-coil | KLNMQSDATDMLNEASQLEEKR |
| Seg: seg | 585-606 | seg | PXXWLVPGPGVGNVAGGVCCRV |
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