PRGDB00064369 (Zm.94908)
| Zm.94908 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 21210141 (AY107063) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Zea mays |
DNA Sequence
GCACGAGGGGAATCCCTGGCTCTAAACAAGCCCTAAACTTTTTACAAGTGGGCATATTAGCATATACCATACAGTTTTCCATAAAAGAACAGTCATACAATCACAACATCAGAACGCTCTGGAGTCGACCGTGGACTTCGAAAATTCTCTTCAGCGGCAGCGCTAAACCATAAGGCAATggcggcggcggcggcgAAGAGTGTATGCGTGACCGGCGCGGGAGGCTTCATCGCGTCTTGGCTCGTGAAGCTCCTCCTCTCCCGTGGTCAGTACGTGGTCCGCGGCACCGTGCGCGACCCTGGTGCTAGCAAGAATGCTCATCTCAAGGAGTTGGAGCGGGCTGGGGAAAGGTTGCAGCTTCTCCAGGCTGATTTGTTGGACTACAGCAGTGTTGCATCAGCAATTGCTGGCTGTGAGGGTGTCTTCCATGTAGCTTGCCCTGTCCCTTCTGGTCGGTCCTCCAACCCCAAGGTGGAGGTCATAGGTCCTGCTGTAGTAGGAACAACCAATGTGTTAAAGGCTTGCTATGAGGCAAAAGTTAAGCGAGTTGTGGTGGTGTCTTCTGTTTCAGCTGTATTCAGTAACCCTAATTGGCCTAAGGACAAGGTCTTTGATGAAGACTCTTGGTCAGACGAGGATTATTGCAGGAAGAATGAGGATTGGTATTATCTTTCTAAAACTCTATCCGAACGTGAGGCTTTTGCTTTTGCAGCAAAATCGGGGCTGAATGTTGTAACTATTTGCCCGTCCTTGGGTATTTGGGCCCTTGATGCAGTCTATAGTAAATACGAACAGTAAAGTACTCCTTAATTATTTCAAAGGAGATCGTGAGACTGTTGAAAACAGACTCAGAAATATGTGGATGTTCGTGATGTTGCTGATCTCCTGTTCTGCTTACGAAAATCAAGAAGCATCTGGACGATACATCTGCAGCTCGCACCATTAAAANTTCTGATATGATAAACATATTGAAGACTTAANCATCTACCTANCCNAAAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.94908 | translated coding region predicted by ESTScan from UniGene Zm.94908 | MAAAAAKSVCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICPSLGIWALDAVYSKYEQ |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR10366 | 1-192 | FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE | MAAAAAKSVCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICPSL |
| HMMPanther: PTHR10366:SF74 | 1-192 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MAAAAAKSVCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICPSL |
| Gene3D: G3DSA:3.40.50.720 IPR016040
|
7-191 | no description NAD(P)-binding domain
|
KSVCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICPS |
| superfamily: SSF51735 | 7-192 | NAD(P)-binding Rossmann-fold domains | KSVCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICPSL |
| HMMPfam: PF01370 IPR001509
|
9-190 | Epimerase NAD-dependent epimerase/dehydratase
|
VCVTGAGGFIASWLVKLLLSRGQYVVRGTVRDPGASKNAHLKELERAGERLQLLQADLLDYSSVASAIAGCEGVFHVACPVPSGRSSNPKVEVIGPAVVGTTNVLKACYEAKVKRVVVVSSVSAVFSNPNWPKDKVFDEDSWSDEDYCRKNEDWYYLSKTLSEREAFAFAAKSGLNVVTICP |
| Coil: coil | 45-66 | coiled-coil | KNAHLKELERAGERLQLLQADL |
| Seg: seg | 119-133 | seg | AKVKRVVVVSSVSAV |
List of Contributions
There has not been any contribution yet.
