PRGDB00064657 (Aan.202)

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Aan.202
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 159023915 (EX980280)
Gene Class RLP
Domain Type Ser-Thr Kinase, LRR
Gene Species Artemisia annua

Comment?

CAIZ904.rev CAIZ Artemisia annua leaf Artemisia annua cDNA clone CAIZ904 3', mRNA sequence

DNA Sequence

tttttttttttttttACTCAACTTGATCAATCTTTGTATATTTCTGACCATGTAACCAAAGTTTTGATCTCTTTAACATTTTATTACAATAAAAAGGGTACTGATATAATATAATATATGTACAATAATTAATACATTAGGAGGAGTTCTCAAATTTTATTTTGCTTATTGAGATACTATCTATACAATTACCGCAACATCAACACCCCATGAATAAAACTGTTTCAGCAGGCCGTTGTGCATTGGCTTGAACTTGAGCAGCATATTGTAGGTGCCAAAGCACATCTTCAAAAGACGGCCGAGCCCATGAATCACTACAAAAACATTTCTTCGTTATGGAGATTATAACCGAAAGTGATTCCTGTGAACAGGAACTGAGTACAACGGGGTCAACTACGTTCTTTCGTTGATCTTCAGTTTCAAATGAAGCCATCTCGTTCATCAGAAATTCTTCTTTTCTGGATGTTGCGGAAGGCCCGACAAGTGACTCCAGTAGAATGAATCCGAAGCTGTAGACATCGTCTTCTAAGTTCTTCATTTGCCATGATTCAACACCTTCCCCGTTCACATCTTCTTGTTTAATATCTTCTGCTATAATAGAAAGCCCATAGTCACTCAGCTTCGCCATTCCATTTTCATTCAACAAAATGTTATTTGCTTTCAAGCGGTTGTTGAAGAAACCAGGAATGATTCCTGTGTGAAGAAAATGCACAGCTTTCGCCACACCAGTTAAAACTCTCAATCTGTCTTCCCATTTAAGAACATCTGCGGGATTATTTCCCGCAAGAACTGAACGATAATTCCCATTATGAACATATTCATA


Protein sequences

Name Description Sequence
Aan.202 translated coding region predicted by ESTScan from UniGene Aan.202

YEYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHLQYAAQVQANAQRPAETVLFMGC

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
 1-187 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

YEYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHLQY

superfamily: SSF56112
IPR011009
 1-185 Protein kinase-like (PK-like)
Protein kinase-like domain

YEYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHL

HMMPanther: PTHR24420
1-199 FAMILY NOT NAMED,FAMILY NOT NAMED

YEYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHLQYAAQVQANAQRPA

HMMPanther: PTHR24420:SF465
1-199 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

YEYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHLQYAAQVQANAQRPA

HMMPfam: PF00069
IPR017442
 2-184 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

EYVHNGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWH

Gene3D: G3DSA:1.10.510.10
6-186 no description

NGNYRSVLAGNNPADVLKWEDRLRVLTGVAKAVHFLHTGIIPGFFNNRLKANNILLNENGMAKLSDYGLSIIAEDIKQEDVNGEGVESWQMKNLEDDVYSFGFILLESLVGPSATSRKEEFLMNEMASFETEDQRKNVVDPVVLSSCSQESLSVIISITKKCFCSDSWARPSFEDVLWHLQ






List of Contributions

There has not been any contribution yet.


Analyses

Blast

Blast matches against Reference R-Genes. Show


Retrieved from "http://prgdb.crg.eu/w/index.php?title=Gene:PRGDB00064657&oldid=22690"
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