PRGDB00064659 (Aan.405)

Aan.405
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	259720586 (EZ195800)
Gene Class	RLK
Domain Type	Ser-Thr Kinase, Receptor-Like Kinase
Gene Species	Artemisia annua
	Comment?

TSA: Artemisia annua strain Artemis Contig9357.Aml mRNA sequence

DNA Sequence

CTTTAATTCATGTTAGTTTCACTTATTGTTTAACAGTTCATAACTTACTCACAATAGCTAGTTTATATATATACCGAGTCAACTCAGTTGGTGGATCGGGTTCTTGTTGTTGAGTTCATTGATTGATTAGTTTACACGTTGATTTCGAAGAAAATAGATTCGAAGGGTTGGCCTTGGTGTTTTTTGTATATACAAACATGATGGAGGTTTTTAGGCTAGAGAAGCATAGGTTGCTGAGTTTGGGTTTGATCATATGTTTGCTGTATCAGAATTTGAGTTTCTGCTGTGGTTTTAATGATGAAGGTTTTTCTATAACAAGATTTAGATATGATATTGGAGTACATAATCCGTGTTCATGGTTTGGTTTTGACTGCTCCAAGGGATATGTTTTATCTTTGAACATTGGCAGAACTGGATTAAAGTCCCACCGGAAACTGCTTGACGAGAATGTAGAAGTACAGCCGCCATTGGTCCCATTTCCGCTACCAGCATCGCCATCGCCTTCACCATCACTGTCACCATCTCCATCTCCAACAGTAGCACCTGTGCCATCACCATCTCCTTCTTCTCTACTACCTCCGCCTTCAACCGTTGCTCAAGCTCCTCCCGCACTCGCAGATCCTCCACCTGCCCTTCCTTTCCTACCATCTGCTGGACAAAGTTCAAGGAAGAAAAACCATCTTGCTTTAGTATTATCTATTACTCTTGGAGCCACTGCATTAGTTGGAATTGTAGCATTATTGCTATGGAGAGGCAATAAAGTCGCCACTGTTAGGCCTTGGGCCACTGGACTAAGTGGCCAATTACAAAAAGCTTTTGTTACTGGGGTTCCAAAGCTAAAAAGATCAGAGCTTGAGGCAGCTTGTGAAGATTTTAGCAATGTAATCGGTTCAACATCGTTTGGGACTGTATATAAAGGGACGTTATCTAGTGGGGTTGAAATAGCAGTTGCTTCTGTGGCTGCACCTTCCGCTAAAGAGTGGTCAAAGCATCTTGAAAGCTCGTTTCGGAAGAGGATTGACATGTTATCGAAGGTGAACCACAAGAATTTTGTGAACCTTCTTGGTTTTTGCGAGGAAGATGAACCTTTTACCAGAATGATAGCGTTCGAATATGCTCCTAATGGAACACTCTTTGAACATCTACATATACAAGAATCAGAACATTTGGACTGGATGATGAGGATGAGAATCGTAATGGGAATGTCATACTGTCTCGACTACATGCATCAACTAACTCCACCCATTGCCCACAAAAACCTAAACTCTTCATCAGTAAACTTAACCGAAGACTACGCAGCAAAAACATCAGATTTCGGCCTATGCAACGATGCATCAACTGCAAACACTGACAAACTCCTGAAAGTAACGTTTACNGCTTTGGTA

Protein sequences

Name	Description	Sequence
Aan.405	translated coding region predicted by ESTScan from UniGene Aan.405	MMEVFRLEKHRLLSLGLIICLLYQNLSFCCGFNDEGFSITRFRYDIGVHNPCSWFGFDCSKGYVLSLNIGRTGLKSHRKLLDENVEVQPPLVPFPLPASPSPSPSLSPSPSPTVAPVPSPSPSSLLPPPSTVAQAPPALADPPPALPFLPSAGQSSRKKNHLALVLSITLGATALVGIVALLLWRGNKVATVRPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLCNDASTANTDKLLKVTFTALV

Domains

Domain	Start-End	Description	Sequence
Seg: seg	12-22	seg	LLSLGLIICLL
Seg: seg	89-132	seg	PPLVPFPLPASPSPSPSLSPSPSPTVAPVPSPSPSSLLPPPSTV
HMMPanther: PTHR24420:SF810	104-375	SUBFAMILY NOT NAMED	PSLSPSPSPTVAPVPSPSPSSLLPPPSTVAQAPPALADPPPALPFLPSAGQSSRKKNHLALVLSITLGATALVGIVALLLWRGNKVATVRPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGL
HMMPanther: PTHR24420	104-375	FAMILY NOT NAMED,FAMILY NOT NAMED	PSLSPSPSPTVAPVPSPSPSSLLPPPSTVAQAPPALADPPPALPFLPSAGQSSRKKNHLALVLSITLGATALVGIVALLLWRGNKVATVRPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGL
Seg: seg	133-152	seg	AQAPPALADPPPALPFLPSA
superfamily: SSF56112 IPR011009	215-376	Protein kinase-like (PK-like) Protein kinase-like domain	KRSELEAACEDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLC
Gene3D: G3DSA:3.30.200.20	215-287	no description	KRSELEAACEDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVN
ProfileScan: PS50011 IPR000719	224-396	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	EDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLCNDASTANTDKLLKVTFTALV
HMMSmart: SM00219 IPR020635	224-396	Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain	EDFSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLCNDASTANTDKLLKVTFTALV
HMMPfam: PF07714 IPR001245	226-382	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase	FSNVIGSTSFGTVYKGTLSSGVEIAVASVAAPSAKEWSKHLESSFRKRIDMLSKVNHKNFVNLLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLCNDASTA
Gene3D: G3DSA:1.10.510.10	288-383	no description	LLGFCEEDEPFTRMIAFEYAPNGTLFEHLHIQESEHLDWMMRMRIVMGMSYCLDYMHQLTPPIAHKNLNSSSVNLTEDYAAKTSDFGLCNDASTAN

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Analyses

Blast

Blast matches against Reference R-Genes. Show