PRGDB00065567 (Afp.121)
| Afp.121 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 74552010 (DT753876) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Aquilegia formosa x Aquilegia pubescens |
DNA Sequence
AGTCTATAATCATGTTTATGGTACAAACCCAAGAATCCCATTTTCCTTGATTTTCATTAGAACTGATACAACTCATATGAATAATATATATATCTTCCATAATGCAAACATATTATTCAGAATCCCGGTTATGTATGAACACCAATAAATGGGGGAAAATAACAAGTCTTTAAAAATATTGAGGAAATGCATCCACCACAACCCAATCCAACAAACAGAACAATCAAAGACCTGTAATGGCTCCATCCAATCACAATGCAACAATAAAAGTATATTATATGATTGAAGACCAAATCTGCAGAAAAAAAGCAAACCATTCACAAAGCGAAACATGTAATATGATGACATCATTTACACATCATCTCATGTCTCAGGAGCTGGGGCAGGAGGCTTCTGATTAAGTAACGGTTGGAGAGCCTTGACGACGATGCTCATGTTTGGCCTGAACTCAGATTCATACTGCACGCACAATGCAGCCACAGCAGCTAGCTTAGCAACTCCTTTTGGTGGATAGTCTCCCTTCAGCTTTGGATCCACACACTGTTTCACCTTGTCCTCACTCAGTCTTGGAGTTGCCCAAGTGACAAGACTCTGCTGTCCACGAGGCATAGTGTGATCAACTGGTTTCCTTCCCGTCAGAAGCTCCAAAAGAACAACACCAAAACTATATACGTCACTCTTTTGCGTCAATTGGCCAGTCATTGCGTACTCAGGCGCATGATAGCCGAAGGTACCCAAAACTCGAGTAGAATGCAAACGAGCCGCCATATCAGGAGCCTGATTTAATAGATTAAAGTCTGCTATTTTGGCTTTGAAATCTTCAAACAGAAGTACATTGCTTGATCTGATGTCCCTATGTATTATAGATGGTTGAATTCTCTCATGCAGATACTCCAATCCCCTTGCTGCCTCAACTGCGATTCTCACTCGCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Afp.121 | translated coding region predicted by ESTScan from UniGene Afp.121 | XRVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLNQKPPAPAPET |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-178 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
XRVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLL |
| HMMSmart: SM00219 IPR020635
|
1-174 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
XRVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKAL |
| Gene3D: G3DSA:1.10.510.10 | 2-173 | no description | RVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKA |
| HMMPanther: PTHR24420:SF416 | 2-187 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | RVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLNQKPPAPAP |
| HMMPanther: PTHR24420 | 2-187 | FAMILY NOT NAMED,FAMILY NOT NAMED | RVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLNQKPPAPAP |
| superfamily: SSF56112 IPR011009
|
2-182 | Protein kinase-like (PK-like) Protein kinase-like domain
|
RVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLNQKP |
| HMMSmart: SM00220 IPR002290
|
2-178 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
RVRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLL |
| HMMPfam: PF07714 IPR001245
|
3-174 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
VRIAVEAARGLEYLHERIQPSIIHRDIRSSNVLLFEDFKAKIADFNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKAL |
| PatternScan: PS00109 IPR008266
|
24-36 | PROTEIN_KINASE_TYR Tyrosine-protein kinase, active site
|
IIHRDIRSSNVLL |
| Seg: seg | 142-155 | seg | PPKGVAKLAAVAAL |
List of Contributions
There has not been any contribution yet.
