PRGDB00065914 (At.9551)
| At.9551 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145359620 (NM_125790) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
GGAGACAGTTAACGTGATTCGCCCTTTTCTCTTTGCCCAAGAGCTATACGACAATACCTccaccacaccccacacacacacacgagagacagagagagagagagagGAAATTTGCTACTGAGAGATACATTCAGTGAGTGTGTGTCTGTCACCGTGGAGGAGAAACGGAAGGAGGATAGATGAAACCGACCGGAGAAGGAGGAGGGGAAGTCGCCGGAGCGGTGGCGGAAGGTTCGGCGTTGTTAATTGTAGGAGTAAAGCCAGATGAATGGAGTAGAGAGGTTCTTACATGGTCTTTGGTGAATGTAGCGCGTCCTGGAGATCGAATCGTTGCTCTTCATGTTCTCGATTATTCTCTAGAGGGCTCAACGTCGCTTATTTCGTTGGTTAGGAATTTTGATACTATGCTTGGTGTTTATGAAAGCTTCTGCAACTTAAAACAGGTAGATTTGAAGTTGAAGGTTTTCAGAGGGAAGTCAGCTAGGAAAGTTCTTGTACAAGAAGTTAAATCGTGTGGAGCTACAAGTTTAATCGTTGGTTCCTCTAGGAAACATCACACTATCCGTTCTTCAGCTTCTTTAGCCAAGTATTGTGCCAGGAATCTTGCCAAGGATGTCTCTGTTTTTGCTGTTAAAAGTGGCAAGATTATGTTCCGCAGAGTACCTAATACCAATGGTGCAGATGGTCCACAGATGAATATTCCCTCTTTAGTTTGTGGATCACCAGATATTGCTATTGAAGCGGCAAAGATTGGAAACAGTTTTAGCCCTGCTAGAACGAGCTCACGCTGGACAAGAACTAGTCGTAGTTCGTCATTGCAGTCTCCTGACAGCTTAGGTGTAGACAATTTGTTGGCTTTAGTGCCAGTACAAACAAATGAGACTGATTCTGGTTCCCTTGAGTCAGGACCAGGTTGGCATTTTCTTCGCGGGCTTTACGGTAATAATCGAAAAAGCTGGACCAAAGTTTCTGCTAAGAAGGCTGTACTTCAGTGGGTTTCGAGGCTGCGAGGTCGGCATTCAGAAACTGTAATCTATCTGGATAGGAAACGGAGTGACTCTGGTTGTGATGAAGATTGCTCTTCTAGTATTGATGGTGAAGATGTTTCTATATCACGGTTTGGTTCTGAGCTTATGCAGTCACCTCTTTCTCCTTTCATTGGATCAAACAACATTCCAGAAGAGCTGGAAGGTCTACATGAAAAGTACTCTTCCACATGTAGATTATTCACATACGAGGAAGTCTTGTCAATTACCTCAAACTTTGCATCTGAGAACTTGGTTGGAGAAGGTGGTAATAGTTATGTTTATAGAGGAGATCTACCAGATGGCAGGGAATTAGCTGTCAAAATATTGAAACCTTGTCTGGATGTGTTGAAGGAATTTATACTGGAAATTGAAGTCATTACCAGTGTACATCACAAAAATATAGTATCTCTCTTTGGTTTCTGTTTCGAGAATAATAATTTGATGCTGGTATACGATTATCTACCACGAGGAAGCCTTGAAGAGAACCTTCATGGCAATAGAAAGGATGCAAAGAAATTTGGCTGGATGGAGAGATATAAGGTGGCAGTGGGTGTTGCCGAGGCGTTAGACTATCTGCATAATACTCATGATCCAGAAGTAATTCACCGGGATGTCAAATCTTCTAATGTTCTTTTGGCAGATGATTTTGAGCCACAGCTCTCAGATTTCGGATTCGCCAGCTTGGCTTCAAGTACCTCACAGCATGTAGCGGGTGGGGATATTGCCGGGACATTTGGTTACCTAGCACCAGAGTACTTCATGCACGGTAAAGTAACCGACAAGATTGATGTCTATGCTTTTGGTGTTGTATTGCTCGAGCTCATATCGGGTAGAAAACCAATCTGCGTCGACCAGTCTAAAGGCCAGGAGAGCCTTGTCTTGTGGGCAAACCCAATTCTAGATAGTGGAAAGTTTGCTCAGTTACTGGATCCCAGTCTAGAAAATGATAACAGTAACGATCTAATCGAGAAACTATTGTTAGCTGCCACGCTATGCATCAAACGCACACCTCATGACCGTCCGCAAATTGGCCTTGTCCTAAAGATATTACAAGGGGAAGAAGAAGCAACAGAGTGGGGAAAGCAACAAGTGAGAGCCTCAGAAGACGTGAGCGCATATTTGACAAATATAGAATCACACATAAACCTCGCATTGCTTGATTTGGAAGATGATGCAGCTTCTGATAGCAGCCCTGAAGCTAGTAGTATCTCTGTTGAGGAATACTTGAAAGGGCGATGGAGCCGCACTGCTAGCTTCAACTTCAACTAATAATTTTTACTAGTTTAACCCCGAAAATCCCAAAATTTGACGATATTGTAAGTTGTGTAAATTGTAATCGATTTTCTGAGATTCTCAAGCTTTAAGTTGTGTCAATTTAGGAAGAGTGAATAGCTCTTGTAGAGAGGACTTAAGTTGGAATTTGTCTTCTTTGTTTTGTCAGAGCAGAAAATGTTTCAAGTGTTCCACTTTCATATCGGTTTTAAAAGTTTAAAAATGT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.9551 | translated coding region predicted by ESTScan from UniGene At.9551 | MKPTGEGGGEVAGAVAEGSALLIVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSVFAVKSGKIMFRRVPNTNGADGPQMNIPSLVCGSPDIAIEAAKIGNSFSPARTSSRWTRTSRSSSLQSPDSLGVDNLLALVPVQTNETDSGSLESGPGWHFLRGLYGNNRKSWTKVSAKKAVLQWVSRLRGRHSETVIYLDRKRSDSGCDEDCSSSIDGEDVSISRFGSELMQSPLSPFIGSNNIPEELEGLHEKYSSTCRLFTYEEVLSITSNFASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKILQGEEEATEWGKQQVRASEDVSAYLTNIESHINLALLDLEDDAASDSSPEASSISVEEYLKGRWSRTASFNFN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-694 | PTHR24420,FAMILY NOT NAMED | MKPTGEGGGEVAGAVAEGSALLIVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSVFAVKSGKIMFRRVPNTNGADGPQMNIPSLVCGSPDIAIEAAKIGNSFSPARTSSRWTRTSRSSSLQSPDSLGVDNLLALVPVQTNETDSGSLESGPGWHFLRGLYGNNRKSWTKVSAKKAVLQWVSRLRGRHSETVIYLDRKRSDSGCDEDCSSSIDGEDVSISRFGSELMQSPLSPFIGSNNIPEELEGLHEKYSSTCRLFTYEEVLSITSNFASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKILQGEEEATEWGKQQVRASEDVSAYLTNIESHINLALLDLEDDAASDSSPEASSISVEEYLKG |
| HMMPanther: PTHR24420:SF425 | 1-694 | PTHR24420:SF425,SUBFAMILY NOT NAMED | MKPTGEGGGEVAGAVAEGSALLIVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSVFAVKSGKIMFRRVPNTNGADGPQMNIPSLVCGSPDIAIEAAKIGNSFSPARTSSRWTRTSRSSSLQSPDSLGVDNLLALVPVQTNETDSGSLESGPGWHFLRGLYGNNRKSWTKVSAKKAVLQWVSRLRGRHSETVIYLDRKRSDSGCDEDCSSSIDGEDVSISRFGSELMQSPLSPFIGSNNIPEELEGLHEKYSSTCRLFTYEEVLSITSNFASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKILQGEEEATEWGKQQVRASEDVSAYLTNIESHINLALLDLEDDAASDSSPEASSISVEEYLKG |
| superfamily: SSF52402 | 22-152 | SSF52402 | LIVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSVFAVK |
| HMMPfam: PF00582 IPR006016
|
23-148 | Usp UspA
|
IVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSV |
| Gene3D: G3DSA:3.40.50.620 IPR014729
|
23-149 | Rossmann-like_a/b/a_fold Rossmann-like alpha/beta/alpha sandwich fold
|
IVGVKPDEWSREVLTWSLVNVARPGDRIVALHVLDYSLEGSTSLISLVRNFDTMLGVYESFCNLKQVDLKLKVFRGKSARKVLVQEVKSCGATSLIVGSSRKHHTIRSSASLAKYCARNLAKDVSVF |
| superfamily: SSF56112 IPR011009
|
332-641 | Kinase_like Protein kinase-like domain
|
IPEELEGLHEKYSSTCRLFTYEEVLSITSNFASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKILQGEEEATE |
| Gene3D: G3DSA:3.30.200.20 | 342-436 | G3DSA:3.30.200.20 | KYSSTCRLFTYEEVLSITSNFASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDY |
| ProfileScan: PS50011 IPR000719
|
362-640 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FASENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKILQGEEEAT |
| HMMPfam: PF00069 IPR017442
|
365-577 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
ENLVGEGGNSYVYRGDLPDGRELAVKILKPCLDVLKEFILEIEVITSVHHKNIVSLFGFCFENNNLMLVYDYLPRGSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVL |
| PatternScan: PS00107 IPR017441
|
368-390 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
VGEGGNSYVYRGDLPDGRELAVK |
| Gene3D: G3DSA:1.10.510.10 | 440-632 | G3DSA:1.10.510.10 | GSLEENLHGNRKDAKKFGWMERYKVAVGVAEALDYLHNTHDPEVIHRDVKSSNVLLADDFEPQLSDFGFASLASSTSQHVAGGDIAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELISGRKPICVDQSKGQESLVLWANPILDSGKFAQLLDPSLENDNSNDLIEKLLLAATLCIKRTPHDRPQIGLVLKI |
| PatternScan: PS00108 IPR008271
|
483-495 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIHRDVKSSNVLL |
List of Contributions
There has not been any contribution yet.
