PRGDB00065918 (At.10378)
| At.10378 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145337316 (NM_105589) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
GCCTGActctctttctctctctcCCGGCGACGACGGTTTAGAGTCGCCATAGATGGATCATAACTCGCCGAAATCTCGTCGGAGCCGGAAACCGGAGCCCAAACCTGACATATACTCCACTTTCGTAGTCCACTCCGACTCTGATTCTGATCAAGGTCGAGATCGAGACAAACGTAAAGCCAAACCTGAGGAAGACGAAAATGTCGATTTATACGCTACAATGGTCTACAAAGGCGATAGTGACGGAGAAGGAGAGGAAGATGATGATGACGATTCTATGCTTCCTCCTCTTCTCAAGCGTCTTCCCAAGGATTTCGGAGGCGGCGCGTCGCTCGATTACGACGACGACGACGGTGATGAATCTGGAGATTTCGGTACGATGATTGTGAAAACAGATCGGAGTAGTCATAGTAAGAAGAACAGTCCGTACTCGTCCAAACCGCGAATGGGAGTTAGTCCTAGGAGGAGAGCGAGAGGCGGagatgaggaatcttctgatgaagaagacgaagaagaagatgatgatgacgacgacggagactacggTACGTTTGTTGTGAAATCTAAGGATAAAAAGGGAAAGAAGAAAGACAAGGAGATTGATATGACAACTATGGGAAGAGCTGTTGCGAGTATGCAGAAATCAAATTTTGGTGGTAAGACTCGGAAATTGGATCCTTCCTCTTCTTCTTCGAAACTTCACGGTGAAGATAATCGGAAAATGCAGCAGCAAAACAGTAAGATGTCGACTACGTCTCTTCCGGATAGCATTACTAGAGAAGATCCAACCACCAAATACGAATTCCTCAATGAACTTGGGAAAGGATCATATGGATCTGTATACAAGGCAAGAGATTTGAAAACATCAGAGATTGTTGCTGTGAAAGTCATATCACTTACTGAAGGGGAGGAGGGGTATGAAGAGATCCGGGGAGAAATTGAGATGCTGCAGCAATGTAATCATCCTAATGTTGTCCGCTACCTAGGGAGTTACCAAGGAGAAGATTATCTTTGGATAGTGATGGAGTATTGTGGAGGTGGAAGTGTTGCTGATCTTATGAATGTTACTGAGGAGGCGTTAGAGGAGTATCAGATAGCATATATATGTCGGGAGGCGTTGAAGGGCCTTGCATACTTGCACTCAATATATAAAGTCCATAGAGACATTAAAGGTGGAAATATCTTGTTAACTGAACAAGGAGAGGTCAAGTTGGGTGACTTTGGGGTTGCAGCTCAACTTACTCGCACTATGTCGAAGCGAAACACGTTCATTGGGACTCCACATTGGATGGCCCCAGAGGTTATTCAGGAAAATCGTTATGATGGGAAGGTTGATGTATGGGCTCTTGGTGTTTCAGCTATTGAGATGGCAGAGGGGCTCCCTCCAAGATCATCAGTTCATCCGATGAGGGTTTTGTTCATGATATCCATCGAGCCAGCTCCAATGCTCGAGGATAAAGAAAAATGGTCCCTGGTCTTTCATGATTTTGTTGCAAAGTGCCTCACAAAGGAACCACGTCTTCGCCCAACTGCAGCTGAGATGCTTAAGCACAAATTTGTTGAGAGATGTAAAACTGGGGCTTCTGCAATGTCGCCAAAGATTGAGAAGTCCAGACAAATCAGAGCTACAATGGCTCTGCAAGCGCAAAGTGTTGTCGCACCTTCTTTGGAGGACACTTCAACACTGGGTCCAAAATCAAGCGAGGAGCTTGGAATTACTGTTCCATCTAAACCTCCTCAAAATTCGACCGAAGCACCTCTAACCAGCACCCTGAATCGGCAGCATATTACTGGCAACACTGTGTTGGCTGGAGAAGGTGGTGACTTCGGAACTATGATCGTTCATGGTGAGGATGAGACAGAGGAGAGTGACTCCAGGTCTCAGCTTGTCAGAGAAAAAGAATCTTCATCTTCTCAGTTTGAAGGTGTTCCTCGCGAATTCCCAGGAGAAGAATTACCTGACTCATGGATACATGACAAAAAGAAGCCTCCGGCTATTGATCTTCCAGTTGAAGCTTCGATTTCACAGAGCATGCAGGCAAGTTCATCTCATGAGCATAGAACCAAGCTACATAACATAGCTGGAACACAGATGGAAGGTGGCAGTGATGCAAGTGGTAGTACCTTGAAAAATGAAACTGTTGGCAGGAAAGCTTTTGCTTTGCAAGATAAGTTATGGTCAATCTACGCAGCTGGAAACACAGTACCGATACCGTTCTTGAGAGCAACAGATATATCCCCAATCGCACTCTTGTCAGAGAACATGATCGGAGGCATGCAACAAGATGGGAATGGAACTGTAGCCGTCGAAGCACTTCAGGAGCTCTTCACTTCTTCTGATCCCCAATCCAAAAAGGGCCGACGTGGACAAAACGAGATGCCTCTTCCTCCAAGCGTATACCAAAGACTGACAACAAGCTCTTCTCTGATGAACCTTGCACAAGTTTTAGCCTACCACAGAGCGTGTTACGAGGAAATGCCGCTGCAGGAATTGCAAGCAACGCAGGAGCAGCAAACCATTCAGAATCTGTGCGATACTCTTCGCACTATTCTCCGCCTCTAAATAGTCTTGTGTTCATATCTGTTGCTACTCTTGTATTAGTATAGGTCGTCTCAGCAAGTACATGTTTATTTTCCTAGAAGTTTTTATTAAAAACCAATCAATTTTGTCTCCTCTTAGCACAATTGCTAGAAGATTGAATGGAACAAACGGATTTTGTAACACTCGTATAAATAGTATCCCCTTAGGTTTAATAATAAATACTATTACAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.10378 | translated coding region predicted by ESTScan from UniGene At.10378 | MDHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVKTDRSSHSKKNSPYSSKPRMGVSPRRRARGGDEESSDEEDEEEDDDDDDGDYGTFVVKSKDKKGKKKDKEIDMTTMGRAVASMQKSNFGGKTRKLDPSSSSSKLHGEDNRKMQQQNSKMSTTSLPDSITREDPTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQIRATMALQAQSVVAPSLEDTSTLGPKSSEELGITVPSKPPQNSTEAPLTSTLNRQHITGNTVLAGEGGDFGTMIVHGEDETEESDSRSQLVREKESSSSQFEGVPREFPGEELPDSWIHDKKKPPAIDLPVEASISQSMQASSSHEHRTKLHNIAGTQMEGGSDASGSTLKNETVGRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSENMIGGMQQDGNGTVAVEALQELFTSSDPQSKKGRRGQNEMPLPPSVYQRLTTSSSLMNLAQVLAYHRACYEEMPLQELQATQEQQTIQNLCDTLRTILRL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24361:SF93 | 14-828 | PTHR24361:SF93,STE20-RELATED KINASE ADAPTER PROTEIN BETA | PEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVKTDRSSHSKKNSPYSSKPRMGVSPRRRARGGDEESSDEEDEEEDDDDDDGDYGTFVVKSKDKKGKKKDKEIDMTTMGRAVASMQKSNFGGKTRKLDPSSSSSKLHGEDNRKMQQQNSKMSTTSLPDSITREDPTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQIRATMALQAQSVVAPSLEDTSTLGPKSSEELGITVPSKPPQNSTEAPLTSTLNRQHITGNTVLAGEGGDFGTMIVHGEDETEESDSRSQLVREKESSSSQFEGVPREFPGEELPDSWIHDKKKPPAIDLPVEASISQSMQASSSHEHRTKLHNIAGTQMEGGSDASGSTLKNETVGRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSENMIGGMQQDGNGTVAVEALQELFTSSDPQSKKGRRGQNEMPLPPSVYQRLTTSSSLMNLAQVLAYHRACYEEMPLQELQATQEQQTIQNLCD |
| HMMPanther: PTHR24361 | 14-828 | PTHR24361,MITOGEN-ACTIVATED KINASE KINASE KINASE | PEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVKTDRSSHSKKNSPYSSKPRMGVSPRRRARGGDEESSDEEDEEEDDDDDDGDYGTFVVKSKDKKGKKKDKEIDMTTMGRAVASMQKSNFGGKTRKLDPSSSSSKLHGEDNRKMQQQNSKMSTTSLPDSITREDPTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQIRATMALQAQSVVAPSLEDTSTLGPKSSEELGITVPSKPPQNSTEAPLTSTLNRQHITGNTVLAGEGGDFGTMIVHGEDETEESDSRSQLVREKESSSSQFEGVPREFPGEELPDSWIHDKKKPPAIDLPVEASISQSMQASSSHEHRTKLHNIAGTQMEGGSDASGSTLKNETVGRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSENMIGGMQQDGNGTVAVEALQELFTSSDPQSKKGRRGQNEMPLPPSVYQRLTTSSSLMNLAQVLAYHRACYEEMPLQELQATQEQQTIQNLCD |
| Gene3D: G3DSA:3.30.200.20 | 227-327 | G3DSA:3.30.200.20 | QNSKMSTTSLPDSITREDPTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYC |
| superfamily: SSF56112 IPR011009
|
235-504 | Kinase_like Protein kinase-like domain
|
SLPDSITREDPTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVE |
| HMMPfam: PF00069 IPR017442
|
249-503 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFV |
| ProfileScan: PS50011 IPR000719
|
249-503 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFV |
| HMMSmart: SM00220 IPR002290
|
249-503 | S_TKc Serine/threonine-protein kinase domain
|
YEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFV |
| PatternScan: PS00107 IPR017441
|
255-278 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGKGSYGSVYKARDLKTSEIVAVK |
| Gene3D: G3DSA:1.10.510.10 | 329-564 | G3DSA:1.10.510.10 | GGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYDGKVDVWALGVSAIEMAEGLPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEKSRQIRATMALQAQSVVAPSLEDTSTLGPKSSEELGITVPSKPPQN |
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