PRGDB00065922 (At.10822)
At.10822 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 2465924 (AF024649) |
Gene Class | RLK-GNK2 |
Domain Type | Ser-Thr Kinase, GNK2 |
Gene Species | Arabidopsis thaliana |
DNA Sequence
CAGAAACAGAGGATTCATCGATGTTATACTCTATCAAAAATTGCAGATTTGCATATGGAAAGACTTCTTCTTCACGATTCATGATCACACGTCGTCCGATTTCTGATGCAAATTTGTGCTTCGATCGCTCAATTCCTCGCTTGGGTTTCATTCCTTGTACTATTAGCGACGGTGGGCTCTTCTTCTTCTTCGGAATCTCTCCTAAATTGTCAACCTTTAGATCACCACCTTGTAAACCCTAGTCGTCTGCTTGGTTTCCTCAGAGCAATGTCTTCCGTCAATGATTTCATAACCAACGACAAGCTTTGGGTCGTTTCTTCCATCACCGATGTATCTCCACCTATCTATGTGTTTCTACAGTGCAGAGAAGATCTCTCTGTTTCCGATTGTCGACATTGCTTCAACGAGAGCAGATTGGAGCTCGAGAGAAATGTTCGGGTTCCGGTTGGTCGAATCCATAGTGATAGATGCTTCTTACGGTTTGATGATCGAGATTTCTCTGAGGAATTTGTTGATCCTACATTTGATAAAGCTAACTGTGAGGAAACAGGGACAGGGTTTGGAGAATTTTGGAGATTTCTTGATGAGGCTTTGGTGAATGTAACTTTAAAGGCTGTTAAAAATGGAGGGTTTGGTGCAGCTTCAGTGATTAAAACCGAGGCCGTGTATGCATTGGCTCAGTGTTGGCAAACACTTGATGAGAACACGTGTCGAGAGTGTTTGGTTAATGCTAGATCGAGCTTGAGAGCTTGTGATGGACATGAAGCTAGAGCTTTTTTTACTGGGTGTTACTTGAAGTATTCTACACACAAGTTCTTTGATGATGATGCTGCAGAACATAAACCTGACGCTGATCAGAGAAACTTTATAAGGTCATCGTTTTTTCCACATTTGAGTGATCGTGATGTTACGAGATTAGCAATTGCTGCGATTTCGTTGTCGATTCTTACTTCTCTTGGAGCCTTTATCAGTTACAGACGGGTTTCAAGGAAAAGAAAAGCTCAAGTTCCATCGTGTGTAAATTTCAAATACGAGATGCTTGAGAAAGCGACCGAGTCTTTCCATGACTCTATGAAACTAGGCCAAGGAGGGGCCGGTTCTGTATACAAAGGGATTCTTCCAGATGGCAGAATCGTTGCAGTCAAAAAGCTCTTCTTTAACACACGTGAATGGGCAGATCAATTCTTCAACGAAGTGAATCTGATCAGCGGAGTTCAACACAAGAACCTTGTGAGACTACTTGGTTGCAGCATTGAAGGTCCCAAAAGTCTTCTTGTCTATGAATATGTTCATAACAGAAGCCTTGATCAAATCCTTTTCATGAAGAACACAGTCCATATTTTGAGCTGGAAGCAACGGTTTAACATCATTATAGGAATATCAGAAGGTCTAGAATACCTTCACAGAGGATCTGAAGTAAAAATCATCCATAGAGACATCAAAACCAGCAATATTCTCCTTGATCGAAACCTAAGTCCCAAAATAGCTGATTTTGGACTCATACGTTCCATGGGCACTGACAAAACGCAAACCAATACTGGAATTGCTGGAACACTTGGTTATCTGGCTCCTGAATATCTGATCAAAGGCCAATTAACAGAGAAAGCTGACGTTTACGCATTTGGAGTTCTTATCATCGAGATAGTAACTGGCAAGAAAAATAACGCATTCACGCAAGGAACTAGCTCGGTTTTATACTCTGTATGGGAACATTTTAAAGCAAACACTTTAGATCGCTCTATCGATCCTCGGTTGAAAGGGAGTTTCGTAGAGGAAGAGGCCTTGAAGGTTCTTCAAATCGGATTGTTGTGTGTTCAATCTTCTGTAGAGTTGAGACCGTCGTCAATGTCTGAGATAGTCTTCATGTTACAGAACAAAGATAGTAAATTTGAATATCCGAAACAGCCTCCGTTCTTGAGTGCCAGTGTTCTAATGCCAGATGAGGAGACTAGAGTCTGATATTATCAGTTTCTTAGGATTGTTAATGTTCTTCTGTAAATGCTCAAAAATGGATTTTACACCATTTCTTTCTCCTTTTCAAATCTTTTATCGTTCATATTTTATTATGAAGGTCAACAAAAATGGAACCAAGGCTAGATTCTAAAAGTTTTGATTCGTTTACATCATTATTCATTTTACAATCTaaaaaaaaaaaaaaaa
Protein sequences
Name | Description | Sequence |
---|---|---|
At.10822 | translated coding region predicted by ESTScan from UniGene At.10822 | MSSVNDFITNDKLWVVSSITDVSPPIYVFLQCREDLSVSDCRHCFNESRLELERNVRVPVGRIHSDRCFLRFDDRDFSEEFVDPTFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLDENTCRECLVNARSSLRACDGHEARAFFTGCYLKYSTHKFFDDDAAEHKPDADQRNFIRSSFFPHLSDRDVTRLAIAAISLSILTSLGAFISYRRVSRKRKAQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFLSASVLMPDEETRV |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
ProfileScan: PS51473 | 1-77 | GNK2,Gnk2-homologous domain profile. | MSSVNDFITNDKLWVVSSITDVSPPIYVFLQCREDLSVSDCRHCFNESRLELERNVRVPVGRIHSDRCFLRFDDRDF |
HMMPanther: PTHR24420:SF433 | 22-562 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | VSPPIYVFLQCREDLSVSDCRHCFNESRLELERNVRVPVGRIHSDRCFLRFDDRDFSEEFVDPTFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLDENTCRECLVNARSSLRACDGHEARAFFTGCYLKYSTHKFFDDDAAEHKPDADQRNFIRSSFFPHLSDRDVTRLAIAAISLSILTSLGAFISYRRVSRKRKAQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFLSASVLMPDEETR |
HMMPfam: PF01657 IPR002902
|
22-77 | Stress-antifung Gnk2-homologous domain
|
VSPPIYVFLQCREDLSVSDCRHCFNESRLELERNVRVPVGRIHSDRCFLRFDDRDF |
HMMPanther: PTHR24420 | 22-562 | FAMILY NOT NAMED,FAMILY NOT NAMED | VSPPIYVFLQCREDLSVSDCRHCFNESRLELERNVRVPVGRIHSDRCFLRFDDRDFSEEFVDPTFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLDENTCRECLVNARSSLRACDGHEARAFFTGCYLKYSTHKFFDDDAAEHKPDADQRNFIRSSFFPHLSDRDVTRLAIAAISLSILTSLGAFISYRRVSRKRKAQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFLSASVLMPDEETR |
Seg: seg | 66-77 | seg | DRCFLRFDDRDF |
ProfileScan: PS51473 | 83-183 | GNK2,Gnk2-homologous domain profile. | DPTFDKANCEETGTGFGEFWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLDENTCRECLVNARSSLRACDGHEARAFFTGCYLKYSTHKF |
HMMPfam: PF01657 IPR002902
|
101-183 | Stress-antifung Gnk2-homologous domain
|
FWRFLDEALVNVTLKAVKNGGFGAASVIKTEAVYALAQCWQTLDENTCRECLVNARSSLRACDGHEARAFFTGCYLKYSTHKF |
Gene3D: G3DSA:2.60.120.200 IPR013320
|
196-282 | no description Concanavalin A-like lectin/glucanase, subgroup
|
DQRNFIRSSFFPHLSDRDVTRLAIAAISLSILTSLGAFISYRRVSRKRKAQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKG |
superfamily: SSF56112 IPR011009
|
237-557 | Protein kinase-like (PK-like) Protein kinase-like domain
|
RRVSRKRKAQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFLSASVLMP |
ProfileScan: PS50011 IPR000719
|
265-563 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFLSASVLMPDEETRV |
HMMSmart: SM00220 IPR002290
|
265-550 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFMLQNKDSKFEYPKQPPFL |
HMMSmart: SM00219 IPR020635
|
265-534 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVFML |
HMMPfam: PF00069 IPR017442
|
267-470 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
DSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQ |
Gene3D: G3DSA:3.30.200.20 | 283-327 | no description | ILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGC |
Gene3D: G3DSA:1.10.510.10 | 328-532 | no description | SIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSSMSEIVF |
PatternScan: PS00108 IPR008271
|
386-398 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKTSNILL |
List of Contributions
There has not been any contribution yet.