PRGDB00066133 (At.27082)
| At.27082 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145339843 (NM_116255) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
GGAGAAGAAAAAGTTGAAAAAATTGTAAAGTCAGTCTCTCCGACTCTTCCTTCCTTCCGTGTTCACCATTGCTACACGTTCTCCACGAACTTTCCGATGCCCAGTCGTCGGAGACATAGCTACACCGTCGGATCTCCTGCAACCACATCTTCCAATTACAGTAACACTACTTTCACCGATCGTTCCTTCCCGACAACCCCTGCCCGTACATCCACCGACACAACCACCTCCATCGCTCGTCGCATCTCCGGTATCTTCATCAACTGCTTCACTCCTCCCGATTCCGTTTCCTCCAACTACATCGACAATTCAAAGTCCTCTTCCGACAATAATATCCGTAGTAGACGTAGCTCAACAGGAAGTAGTAGTGTACAGAGGAGTTATGGAAATGCAAACGAAACAGAGCATACAAGATTCACCTTCGATGAAATCTACGACGCGACCAAGAACTTCTCTCCGTCCTTTAGGATCGGACAAGGCGGTTTTGGCACTGTTTACAAGGTCAAACTCAGAGATGGCAAAACCTTTGCTGTGAAACGTGCCAAAAAGAGTATGCATGACGACCGTCAAGGTGCAGATGCAGAGTTTATGAGTGAGATTCAGACATTAGCTCAAGTTACTCATTTGAGTTTGGTTAAATACTATGGATTTGTTGTTCATAACGACGAGAAGATTCTCGTTGTGGAGTATGTAGCCAATGGAACTCTTAGAGATCACTTGGATTGTAAGGAAGGAAAGACTCTCGACATGGCGACTCGGTTAGATATCGCAACCGATGTAGCTCATGCCATAACCTATCTTCACATGTATACACAGCCACCTATCATCCACAGAGATATCAAATCTTCAAACATTCTCCTCACTGAGAATTACAGAGCCAAGGTTGCTGATTTCGGGTTTGCAAGATTAGCTCCAGATACTGATTCAGGAGCCACGCATGTGTCAACACAAGTCAAAGGAACCGCTGGTTACTTAGACCCAGAGTACTTAACAACGTATCAACTCACAGAGAAAAGTGACGTCTACTCTTTTGGTGTACTGCTCGTCGAGCTTCTCACAGGTCGGCGTCCCATCGAGCTTAGCAGAGGACAAAAAGAACGCATCACCATTAGATGGGCGATCAAGAAGTTCACGAGTGGAGATACGATATCGGTATTGGACCCGAAGCTAGAACAGAATTCAGCGAACAACTTAGCATTAGAGAAGGTATTGGAGATGGCGTTTCAATGTCTAGCTCCTCATAGACGTTCGAGACCAAGCATGAAAAAATGCAGTGAGATTTTGTGGGGAATTCGTAAAGATTACAGAGAGTTGCTCAACACAAGTCTTTGATGATATTATTCTCTACGCttatataatatggttttgaatacacaattatatattatttgtttgaatattaatttgTCATACACGATGCATTCTTGTACGAGAATTGTTGATTTGTAATTGATTTTGAAATTTGTAGTATTATATTAACGTGTATTTGGTGTTAATAAATTGAGTTATTATCATTCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.27082 | translated coding region predicted by ESTScan from UniGene At.27082 | GEEKVEKIVKSVSPTLPSFRVHHCYTFSTNFPMPSRRRHSYTVGSPATTSSNYSNTTFTDRSFPTTPARTSTDTTTSIARRISGIFINCFTPPDSVSSNYIDNSKSSSDNNIRSRRSSTGSSSVQRSYGNANETEHTRFTFDEIYDATKNFSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILWGIRKDYRELLNTSL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF813 | 35-437 | SUBFAMILY NOT NAMED | SRRRHSYTVGSPATTSSNYSNTTFTDRSFPTTPARTSTDTTTSIARRISGIFINCFTPPDSVSSNYIDNSKSSSDNNIRSRRSSTGSSSVQRSYGNANETEHTRFTFDEIYDATKNFSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILWGIRKDYRE |
| HMMPanther: PTHR24420 | 35-437 | FAMILY NOT NAMED,FAMILY NOT NAMED | SRRRHSYTVGSPATTSSNYSNTTFTDRSFPTTPARTSTDTTTSIARRISGIFINCFTPPDSVSSNYIDNSKSSSDNNIRSRRSSTGSSSVQRSYGNANETEHTRFTFDEIYDATKNFSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILWGIRKDYRE |
| Seg: seg | 48-59 | seg | TTSSNYSNTTFT |
| Seg: seg | 64-83 | seg | PTTPARTSTDTTTSIARRIS |
| Seg: seg | 95-127 | seg | SVSSNYIDNSKSSSDNNIRSRRSSTGSSSVQRS |
| superfamily: SSF56112 IPR011009
|
121-436 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SSSVQRSYGNANETEHTRFTFDEIYDATKNFSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILWGIRKDYR |
| Gene3D: G3DSA:3.30.200.20 | 135-222 | no description | EHTRFTFDEIYDATKNFSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHND |
| ProfileScan: PS50011 IPR000719
|
151-409 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQ |
| HMMSmart: SM00220 IPR002290
|
151-430 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILWG |
| HMMSmart: SM00219 IPR020635
|
151-428 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSPSFRIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEIL |
| HMMPfam: PF00069 IPR017442
|
156-426 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
RIGQGGFGTVYKVKLRDGKTFAVKRAKKSMHDDRQGADAEFMSEIQTLAQVTHLSLVKYYGFVVHNDEKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSE |
| PatternScan: PS00107 IPR017441
|
157-183 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGQGGFGTVYKVKLRDGKTFAVKRAKK |
| Gene3D: G3DSA:1.10.510.10 | 223-429 | no description | EKILVVEYVANGTLRDHLDCKEGKTLDMATRLDIATDVAHAITYLHMYTQPPIIHRDIKSSNILLTENYRAKVADFGFARLAPDTDSGATHVSTQVKGTAGYLDPEYLTTYQLTEKSDVYSFGVLLVELLTGRRPIELSRGQKERITIRWAIKKFTSGDTISVLDPKLEQNSANNLALEKVLEMAFQCLAPHRRSRPSMKKCSEILW |
| PatternScan: PS00108 IPR008271
|
275-287 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKSSNILL |
List of Contributions
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