PRGDB00071176 (Mtr.3866)
Mtr.3866 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 20273925 (BQ137799) |
Gene Class | Unknown |
Domain Type | |
Gene Species | Medicago truncatula |
DNA Sequence
ctgatacgccagctcgaaattaaccctcactaaagggaacaaaagctggagctccaccgcggtggcggccgctctagaactagtggatcccccgggctgcaggaattcggcacgaggcTGAAGCTCTGGAAACACAAGTTAAAAGCAAGGTCTCTATCAAGGGACATCTGCATACATACAGATTTTGTGACAATGTTTGGACCTTCATCTTACAAGATGCTTTGTTTAAGAATGAAGACAACCAAGAGAATGTTGGACGGGTTAAAATAGTGGCATGTGACTCGAAATTGCTCAGTCAGTAATATGCTCAATTTCTATCGTATTGTCAACGAGGAGCTTATCATCTGCTGGTACCATGGATTGGTGGTTAGACCATAGTGACGGATGTGGCCTTCAGTTCTTGCAGGAACCAGCATCTACACTATGTTATTATAGATTTAAAAGGCCTTCAATCTTCATGTTATTATTATGTAATTCATGTTACATTGAGAATATCACTTGGGAACTGGATGAATCTATTATTTAACTGTATTGATTTCTATTTGACCaaaaaaaaaaCTGTACTCTGTTCTATTCTTCCATGAGCTCTATGTAAACAAATTTATaaaaaaaaaaagaaaaagaaaaaGGGCCTCAGAGGGGGGGCCCGGTCACCCAATTCCCCCTATAGTGGAGTCCGTTATTACAATTTCCACTGGCCGGTCGTGTTTTAAAACCGTTCGGTGgactgggaaaaccctggcgttaacccaactttaatcggcttggcaagcacagttccccttttctgccaggctg
Protein sequences
Name | Description | Sequence |
---|---|---|
Mtr.3866 | translated coding region predicted by ESTScan from UniGene Mtr.3866 | XXYASSKLTLTKGNKSWSSTAVAAALELVDPPGCRNSAEAEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLSQ |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR10966 IPR003194
|
41-100 | TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Transcription initiation factor IIA, gamma subunit
|
EALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLSQ |
superfamily: SSF50784 IPR009088
|
46-96 | Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA, beta-barrel
|
QVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSK |
HMMPfam: PF02751 IPR015871
|
46-95 | TFIIA_gamma_C Transcription initiation factor IIA, gamma subunit
|
QVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDS |
Gene3D: G3DSA:2.30.18.10 IPR009088
|
49-98 | no description Transcription factor IIA, beta-barrel
|
SKVSIKGHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLL |
List of Contributions
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