PRGDB00071628 (Nta.10823)
| Nta.10823 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 83420547 (DW002541) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Nicotiana tabacum |
DNA Sequence
TCTGGAGGAAGTGTATATGACTATTTACACAAACAAAAGGGCAGTTTTAAACTTCCTACTTTGCTCAAAGTAGCAATTGATGTATCAAAAGGAATGAATTACCTGCATCAGAATAGTATCATACACAGGGACTTGAAGGCTGCCAATCTATTGATGGATGAAAATGAAGTTGTTAAAGTGGCTGATTTTGGTGTTGCCAGAGTGAAGGCACAGACTGGCGTCATGACGGCGGAGACCGGGACCTATAGATGGATGGCCCCTGAGGTTATAGAACACAAGCCATATGATCACAAAGCAGATATTTTCAGTTTCGGGGTTCTGTTATGGGAATTGATGACTGGAAAGCTCCCATATGAGTACTTGACCCCACTACAAGCTGCCATTGGAGTGGTCCAGAAGGGGTTGCGACCAATTATTCCCAAAAATACTCATCCAAAACTTGCTGAGTTGCTTGAAAAATGCTGGCAACGAGATCCAACGTCGAGGCCTGATTTCCCTGAAATAATAGAGATGTTGCAGCAAATAGCAAAAGAGGTTGCAGATGAGGAAGATGATCGTCGCAAGGAGAAGTCATCATCTGGAGGATTCTTTTCAGTCCTCAGACGTGGACACCACTAAGTAGATACACTTATAGAGAATGTTGATAAAAAATTATAATCTGATTACACGTTTCTAGCCTTATTTATCCATATTGTACAGATTTTTTCCTGATCAATGTTCTCGTCATTTTTAATATAAAGTTTTTGC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Nta.10823 | translated coding region predicted by ESTScan from UniGene Nta.10823 | SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIAKEVADEEDDRRKEKSSSGGFFSVLRRGHH |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-176 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIA |
| HMMPanther: PTHR23257:SF82 | 1-188 | PROTEIN KINASE ATMRK1,Ser-thr,PROTEIN KINASE ATMRK1 | SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIAKEVADEEDDRRK |
| HMMPanther: PTHR23257 | 1-188 | FAMILY NOT NAMED,Ser-thr,SERINE-THREONINE PROTEIN KINASE | SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIAKEVADEEDDRRK |
| superfamily: SSF56112 IPR011009
|
1-172 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEML |
| HMMSmart: SM00219 IPR020635
|
1-172 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEML |
| HMMSmart: SM00220 IPR002290
|
1-176 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
SGGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIA |
| Gene3D: G3DSA:1.10.510.10 | 2-192 | no description | GGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEMLQQIAKEVADEEDDRRKEKSS |
| HMMPfam: PF07714 IPR001245
|
2-172 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
GGSVYDYLHKQKGSFKLPTLLKVAIDVSKGMNYLHQNSIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHPKLAELLEKCWQRDPTSRPDFPEIIEML |
| FPrintScan: PR00109 IPR001245
|
34-52 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
YLHQNSIIHRDLKAANLLM |
| PatternScan: PS00108 IPR008271
|
40-52 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKAANLLM |
| FPrintScan: PR00109 IPR001245
|
80-90 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
GTYRWMAPEVI |
| FPrintScan: PR00109 IPR001245
|
99-121 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
ADIFSFGVLLWELMTGKLPYEYL |
| FPrintScan: PR00109 IPR001245
|
143-165 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
THPKLAELLEKCWQRDPTSRPDF |
List of Contributions
There has not been any contribution yet.
