PRGDB00073959 (Pin.8297)
| Pin.8297 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 239846883 (GR289548) |
| Gene Class | Unknown |
| Domain Type | LRR |
| Gene Species | Phytophthora infestans |
DNA Sequence
TTTTTTTGACGGAAGGTTAAGCGCACGTTTCATTCGCTTATAGTAACTACGAAAAACTGGAGACGTCTCTCATACTTTTGTCTGCACTGCCGAAAGGTGGAAGGCGCGCTTCCGTGAGACGAGGTGAGAGTTGTTGGCGGGGTCATCTTCTGGAGCTCCGTCGCCCGGTTCATCGCTTCTTCCCTTGTGATCAAAGCTCGGACTCAAGAACGTGGCTGACGAATTGGACGGCGGGTCCTCAAGCGTCTGCAAGAACTGATGCGATGATGTGGGTGGCGTATCTGGCGTGGGCATGGGGTCTCCCAGAATGGCGTGATGGTAGCTCGCTTTACGGTTCTTCCACTTGGTCATAACGGCCTCGAGACTAGAGCAACCGTCCAGGAAGTTGGGCAGCTCGCCACGCAGTCGGTTGTCGCGGAAGTCGGACTCTTTAAGGAATTTAAGCCGCGCGATGCTGCCCGGCACGCGGCCTTCAAGGGCGTTGTCGAACAGGTAGAGATACTCGAGGTCTTCCAGGTCTCCCAATGTCTCGGGAATAGGTCCGCTGAGTTGGTTGCTAGACAGATTGAGGAACTCGAGCGCCTTGCAGCAGCCGATGGACGGCGGGATGACACCTGTCAGCTCATTGTTGCGCAGGGACAGGAAAACCAACGACTGCGAGCGGCCGATCTCTACCGGACGCGGCCCGTGAGGCAGATGCCCCGCACGCTGAACTTGGTGAGCTGTGAAGCTCACACAGAGCGTCGGTAAAGCTCCAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Pin.8297 | translated coding region predicted by ESTScan from UniGene Pin.8297 | XGALPTLCVSFTAHQVQRAGHLPHGPRPVEIGRSQSLVFLSLRNNELTGVIPPSIGCCKALEFLNLSSNQLSGPIPETLGDLEDLEYLYLFDNALEGRVPGSIARLKFLKESDFRDNRLRGELPNFLDGCSSLEAVMTKWKNRKASYHHAILGDPMPTPDTPPTSSHQFLQTLEDPPSNSSATFLSPSFDHKGRSDEPGDGAPEDDPANNSHLVSRKRAFHLSAVQTKV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52058 | 24-134 | L domain-like,LRR | HGPRPVEIGRSQSLVFLSLRNNELTGVIPPSIGCCKALEFLNLSSNQLSGPIPETLGDLEDLEYLYLFDNALEGRVPGSIARLKFLKESDFRDNRLRGELPNFLDGCSSLE |
| HMMPanther: PTHR24420 | 25-134 | FAMILY NOT NAMED,FAMILY NOT NAMED | GPRPVEIGRSQSLVFLSLRNNELTGVIPPSIGCCKALEFLNLSSNQLSGPIPETLGDLEDLEYLYLFDNALEGRVPGSIARLKFLKESDFRDNRLRGELPNFLDGCSSLE |
| Gene3D: G3DSA:3.80.10.10 | 27-134 | no description | RPVEIGRSQSLVFLSLRNNELTGVIPPSIGCCKALEFLNLSSNQLSGPIPETLGDLEDLEYLYLFDNALEGRVPGSIARLKFLKESDFRDNRLRGELPNFLDGCSSLE |
| HMMPfam: PF12799 | 36-72 | LRR_4,Leucine Rich repeats (2 copies) | SLVFLSLRNNELTGVIPPSIGCCKALEFLNLSSNQLS |
| Seg: seg | 81-90 | seg | DLEDLEYLYL |
| Seg: seg | 154-164 | seg | DPMPTPDTPPT |
| Seg: seg | 196-208 | seg | DEPGDGAPEDDPA |
List of Contributions
There has not been any contribution yet.
