PRGDB00074279 (Ppe.846)

Ppe.846
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	22480275 (BU040198)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Prunus persica
	Comment?

PP_LEa0005C23f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0005C23f, mRNA sequence

DNA Sequence

AGTAAGAAGGATCCGCTTACGTCTGGTTGGAATGAGAGATATAAGGTTGCTGTTGGTGTAGCTGAGGCCTTGGATTATCTGCACACCAGCAGTGCTCAACCTGTAATCCACAGGGATGTCAAGTCATCCAATATTCTACTATCTGATGATTTTGAGCCACAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTCCTCTTCACATATAACATGCACTGATGTTGCAGGCACCTTTGGCTACTTGGCTCCTGAATACTTTATGTATGGCAAAGTAAACGACAAGATTGACGTATATGCATTCGGTGTCGTACTCCTTGAGCTTCTTTCTGGAAGAAAGCCTATAAGCAGTGACTATCCAAAAGGCCATGAGAGCCTGGTCATGTGGGCCAAGCCAATTCTAAGCGGTGGGAAGGTGTCTCAACTATTATATCCGTGCTTTNGCCCTGACTACAACTCCGACCCCATTGAGAGAATGgtttttaccccccctctttgttttagacatgccccacgagctttgccccccaatgagcttttttGTGAAGCTCCTTCTAGGGGATGCTTATGCCATCTAGTGGGCCCGGCCTTCCCTTTCCTGCTCTGGGACGAATCCGTTGGGCTTCCGGGCCGCTCCCTGTTCTCCCTCCTATTTTGTTGTCCTTACTTCTTCCTTTTCCTGGTCTCCTGTTGGGTGGTCCCctccttcccactgtccctcctgccccgctgcctgtgccccgccccacttccccgccgCGCTCGTGGGCCCAACTCCTCTGCTTTTTCCGCCCCGAAATCTCACAAGAACaaaaaaaacaaaaaaaa

Protein sequences

Name	Description	Sequence
Ppe.846	translated coding region predicted by ESTScan from UniGene Ppe.846	SKKDPLTSGWNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFTPPLCFRHAPRALPPNELFCEAPSRGCLCHLVGPAFPFLLW

Domains

Domain	Start-End	Description	Sequence
ProfileScan: PS50011 IPR000719	1-173	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	SKKDPLTSGWNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFTPPLCFRHAPR
HMMSmart: SM00220 IPR002290	2-163	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	KKDPLTSGWNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFT
HMMPanther: PTHR24420:SF425	9-176	SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED	GWNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFTPPLCFRHAPRALP
HMMPanther: PTHR24420	9-176	FAMILY NOT NAMED,FAMILY NOT NAMED	GWNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFTPPLCFRHAPRALP
superfamily: SSF56112 IPR011009	10-185	Protein kinase-like (PK-like) Protein kinase-like domain	WNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYNSDPIERMVFTPPLCFRHAPRALPPNELFCEAP
Gene3D: G3DSA:1.10.510.10	10-153	no description	WNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGHESLVMWAKPILSGGKVSQLLYPCFXPDYN
HMMPfam: PF00069 IPR017442	10-123	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	WNERYKVAVGVAEALDYLHTSSAQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKG
PatternScan: PS00108 IPR008271	35-47	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	VIHRDVKSSNILL

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Analyses

Blast

Blast matches against Reference R-Genes. Show