PRGDB00074326 (Ppe.19091)
| Ppe.19091 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 47059738 (AY599223) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Prunus persica |
DNA Sequence
ATATGGACTCAGCTCCAACAGCTCTCTTGGTTGGCAAAATTATGGACATTCTCGAGAACGAAGCATACTCCATAGCCGCTGTCCGTGATGAAGTTGATGAGATTAAGCAGGAGCTGGTAAGCATGACATCCTTCCTAGAGGATGTTGAGGGCAAGAAAACACAGACAGAAACACAGAAAGCTTGGGTCACAAGTGTCAAAGACTTAACCAGTGATGTTGAAGATATCATCGATGAATTCATGTATCATACGTATGAGCAGCAAAGTAGGGGACGATTTGCAAGGTGGCTCCACAGGACCATTCATATTCCAAAGAATCTCTTCTATCGGCGTAAAATTGCCAACAAGTTACACAAAATCACTAAAATGATCAAGGCCATTCCAGAGAGAAATAGGAGATATGCTCTTGATGGTGTAGTAGGAACAAGTTGGGATGATATTAGCAAATGGGTCAAGAACCAAGCAGTGTCTTCTCTCTTTATTAACAAAGATGAACTCGTCGGGATTGATGGAAAGAAGCAAACATTAACTGCATGGCTGCTCAATGAAGAGCAGCACCTAACTGTTGTCTCCGTGGTCGGGATGGGAGGATCCGGGAAAACAACTCTAGTTGCCAAAACCTTCGCCAACGAAACTGTAAAGAGACATTTTGATTCTTATGCTTGGATCACTGTCTCCCAAACTTATGTGATTGAAGACTTGTTTCGGAGCTTGATCAAGGAACTCCACCAAACAAGGAAAGAAGATGTCCCTGCAGACCCGATATCCATGAGCTACAGAGACTTGCTACAACTTCTGGTGAACTACCTGGAGTCTAAAAGGTACCTAGTAGTACTGGATGACGTGTGGGATATCAAACTTTGGAGAGAAATAAGGATAGCACTTCCAGATAGACAGCTTGGAAGTCGAATCATGCTTACAACTCGAAAAGAAGACATAGCATCCCATTGTTTTGGAGTTGAAAGCCATGTTCACTGTATGCAACCGCTGGAAAAGAATTACGCTTGGGAGCTTTTCAGCAGGAAATCATTCTCTACCTTTGATGGTAAATGTTGTCCACCAGAGCTTGAAAAATTAGCTTGGGAACTCATGGAAAAGTGTAAAGGCCTACCTCTAGCTATCATAGCTTTAGGTGGTCTTATGTCTTCCAAGAAATTAGCTGCGGAGTGGAGTAAAGTCTACAATGGCTTAAATTGGCATCTAACAAGCCATCATTTGTTAGAACCTGTGAAGAGCATCTTGTTACTTAGTTTCAATGATTTGCCATATCGCTTGAAGCATTGTTTTCTATATTGTTCCCTTTTTCCAGAAGATTATTTGATTCGAAGGAAAAGGCTCATTAGGTTATGGATAGCTGAAGGATTTGTTGAACATGCTAGAGGGGTCACACCTGAACAAGTTGCAGATAGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAAGTTGTAGAGAGGAATGAAACCGGTAGGCCAAAATCATGTAAGATGCATGACCTTATGCGAGAGCTTGCTCTGTCAACATCTGAGAAAGAAAAATTTTCTATTGTACATGATGGGAAAGAAGTACTGGAAGACATTGGAGCCCGCCGTTTGTCAATCCAAACAACCCAAGGAGGAATTGAATCTTGCATTGGTATGTCACGCCCTCGTTCTTTTCTTGTATTCGTTACTGGCATATTCTCATTTTCTTTCTCAAAGTCATTGCCTTCTGGATTCAAATTGTTGAGGGTTTTAGATTTGGAGGATGTCCAAATTGATAAGCTGCCACATAATTTAGTGTACTTATTCAACTTAAGATACTTAAGTTTGAAGGGAACTCAAATTAAGGAGCTTCCAAAAGCCATAGGACTGCTCCGCAACCTTCAGACATTGAACATCCTCAATACTAAGATAGAGGTACTTCCCAGAGGTATTTCCAAGTTGCAAAACCTGCGCCATCTAATTATGCTCCGTCATTCTGGAGAGTATATGGCCTTCAAAACTGCCCATGGGACAAGAGTGCCATTTAATATTAGTAAGCTGAAGAAATTGGAAGTTTTGTCATGTGTTGAATCAGAAGGAAACATTATAAGGCTCATTGGGAATATGACTCAACTTACAAGGATTGGCATTACGAATGTAAAAGAGAGAGACGCAATGGACCTATGTGATTCAATTCAAAAGTTGAAGCTACTTCAGTGCTTGGCTTTAAGGGTAAGTGGTGAGGAGGAGTTTCTTGACGTCAATGCATTATCTTCACCTCCTCCACACCTTCGAAAACTTATTTTTGGCAGCAAGCTGCAAAAGGTACCACCTTGGTTCTCTTCGCTCCAGAACCTTACATATCTGTATCTTCATTGGACGAGACTTGACGAGGATTTACTACCTCATATTGAAGCATTGCCATGTCTGGGAAGGCTTTTACTTGTCAATGCCTATGTTGGTAATGAGTTGTGTTTCAACAGAGGCTTTCCAAAGCTTACTATTCTGGAGTTGTTTAATTTCCCCTTATTGAATAAGATAACTATAGCAGAAGGGGTGATGAGGAATCTCCGGTTATTAACACTTGCTAGATGTATGGAGTTAAAGGCATTGCCACAGGGTTTTGAATACCTTAGTAAGCTAGAAACACTTGAATTGTTGTCTGTTTCAATGCAACTTATAGAGTCCATACAAGAAGGAGGGGTGGATCATCCAACGGTAAAACACATCACCGTCATTACAAATTATTCTTTGAAATGCTTGATAAGAGCTCATCATAGTTCATCCACATGAAGAATCTAGGCTGAGAGGTGAAGATTCAATCCTGTTTGCGCCAGGAAGAACCCTTTCTGTTGTGAAGCTGCAAACACTAAATCTTATTTTCTTTTGTTAATGCTTGAATCAAGTAATACCAAGACTCTCTGCTCATAGATTGCATTTTCAGTACTGTCTGTTTGTATGTCTTGTAATATTGTTGGAGATTGACTCACTTTAGTAGCAATTGATAACAGATTTGAGCCTaaaaaaaaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ppe.19091 | translated coding region predicted by ESTScan from UniGene Ppe.19091 | XMDSAPTALLVGKIMDILENEAYSIAAVRDEVDEIKQELVSMTSFLEDVEGKKTQTETQKAWVTSVKDLTSDVEDIIDEFMYHTYEQQSRGRFARWLHRTIHIPKNLFYRRKIANKLHKITKMIKAIPERNRRYALDGVVGTSWDDISKWVKNQAVSSLFINKDELVGIDGKKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIASHCFGVESHVHCMQPLEKNYAWELFSRKSFSTFDGKCCPPELEKLAWELMEKCKGLPLAIIALGGLMSSKKLAAEWSKVYNGLNWHLTSHHLLEPVKSILLLSFNDLPYRLKHCFLYCSLFPEDYLIRRKRLIRLWIAEGFVEHARGVTPEQVADSYLMELIFRNMLQVVERNETGRPKSCKMHDLMRELALSTSEKEKFSIVHDGKEVLEDIGARRLSIQTTQGGIESCIGMSRPRSFLVFVTGIFSFSFSKSLPSGFKLLRVLDLEDVQIDKLPHNLVYLFNLRYLSLKGTQIKELPKAIGLLRNLQTLNILNTKIEVLPRGISKLQNLRHLIMLRHSGEYMAFKTAHGTRVPFNISKLKKLEVLSCVESEGNIIRLIGNMTQLTRIGITNVKERDAMDLCDSIQKLKLLQCLALRVSGEEEFLDVNALSSPPPHLRKLIFGSKLQKVPPWFSSLQNLTYLYLHWTRLDEDLLPHIEALPCLGRLLLVNAYVGNELCFNRGFPKLTILELFNFPLLNKITIAEGVMRNLRLLTLARCMELKALPQGFEYLSKLETLELLSVSMQLIESIQEGGVDHPTVKHITVITNYSLKCLIRAHHSSST |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF234 | 3-904 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); PROTEIN BINDING,RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1) | DSAPTALLVGKIMDILENEAYSIAAVRDEVDEIKQELVSMTSFLEDVEGKKTQTETQKAWVTSVKDLTSDVEDIIDEFMYHTYEQQSRGRFARWLHRTIHIPKNLFYRRKIANKLHKITKMIKAIPERNRRYALDGVVGTSWDDISKWVKNQAVSSLFINKDELVGIDGKKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIASHCFGVESHVHCMQPLEKNYAWELFSRKSFSTFDGKCCPPELEKLAWELMEKCKGLPLAIIALGGLMSSKKLAAEWSKVYNGLNWHLTSHHLLEPVKSILLLSFNDLPYRLKHCFLYCSLFPEDYLIRRKRLIRLWIAEGFVEHARGVTPEQVADSYLMELIFRNMLQVVERNETGRPKSCKMHDLMRELALSTSEKEKFSIVHDGKEVLEDIGARRLSIQTTQGGIESCIGMSRPRSFLVFVTGIFSFSFSKSLPSGFKLLRVLDLEDVQIDKLPHNLVYLFNLRYLSLKGTQIKELPKAIGLLRNLQTLNILNTKIEVLPRGISKLQNLRHLIMLRHSGEYMAFKTAHGTRVPFNISKLKKLEVLSCVESEGNIIRLIGNMTQLTRIGITNVKERDAMDLCDSIQKLKLLQCLALRVSGEEEFLDVNALSSPPPHLRKLIFGSKLQKVPPWFSSLQNLTYLYLHWTRLDEDLLPHIEALPCLGRLLLVNAYVGNELCFNRGFPKLTILELFNFPLLNKITIAEGVMRNLRLLTLARCMELKALPQGFEYLSKLETLELLSVSMQLIESIQEGGVDHPTVKHITVITNY |
| HMMPanther: PTHR23155 | 3-904 | FAMILY NOT NAMED,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | DSAPTALLVGKIMDILENEAYSIAAVRDEVDEIKQELVSMTSFLEDVEGKKTQTETQKAWVTSVKDLTSDVEDIIDEFMYHTYEQQSRGRFARWLHRTIHIPKNLFYRRKIANKLHKITKMIKAIPERNRRYALDGVVGTSWDDISKWVKNQAVSSLFINKDELVGIDGKKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIASHCFGVESHVHCMQPLEKNYAWELFSRKSFSTFDGKCCPPELEKLAWELMEKCKGLPLAIIALGGLMSSKKLAAEWSKVYNGLNWHLTSHHLLEPVKSILLLSFNDLPYRLKHCFLYCSLFPEDYLIRRKRLIRLWIAEGFVEHARGVTPEQVADSYLMELIFRNMLQVVERNETGRPKSCKMHDLMRELALSTSEKEKFSIVHDGKEVLEDIGARRLSIQTTQGGIESCIGMSRPRSFLVFVTGIFSFSFSKSLPSGFKLLRVLDLEDVQIDKLPHNLVYLFNLRYLSLKGTQIKELPKAIGLLRNLQTLNILNTKIEVLPRGISKLQNLRHLIMLRHSGEYMAFKTAHGTRVPFNISKLKKLEVLSCVESEGNIIRLIGNMTQLTRIGITNVKERDAMDLCDSIQKLKLLQCLALRVSGEEEFLDVNALSSPPPHLRKLIFGSKLQKVPPWFSSLQNLTYLYLHWTRLDEDLLPHIEALPCLGRLLLVNAYVGNELCFNRGFPKLTILELFNFPLLNKITIAEGVMRNLRLLTLARCMELKALPQGFEYLSKLETLELLSVSMQLIESIQEGGVDHPTVKHITVITNY |
| superfamily: SSF52540 | 149-403 | P-loop containing nucleoside triphosphate hydrolases | KWVKNQAVSSLFINKDELVGIDGKKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIASHCFGVESHVHCMQPLEKNYAWELFSRKSFSTFDGKCCPPELEKLAWELMEKCKGLPLAIIALGGLMSSKKLAAEWSKVYNGLNWHLTS |
| Gene3D: G3DSA:3.40.50.300 | 171-315 | no description | GKKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIAS |
| HMMPfam: PF00931 IPR002182
|
172-458 | NB-ARC,NBS NB-ARC
|
KKQTLTAWLLNEEQHLTVVSVVGMGGSGKTTLVAKTFANETVKRHFDSYAWITVSQTYVIEDLFRSLIKELHQTRKEDVPADPISMSYRDLLQLLVNYLESKRYLVVLDDVWDIKLWREIRIALPDRQLGSRIMLTTRKEDIASHCFGVESHVHCMQPLEKNYAWELFSRKSFSTFDGKCCPPELEKLAWELMEKCKGLPLAIIALGGLMSSKKLAAEWSKVYNGLNWHLTSHHLLEPVKSILLLSFNDLPYRLKHCFLYCSLFPEDYLIRRKRLIRLWIAEGFVEH |
| Seg: seg | 189-199 | seg | VVSVVGMGGSG |
| FPrintScan: PR00364 IPR000767
|
189-204 | DISEASERSIST Disease resistance protein
|
VVSVVGMGGSGKTTLV |
| FPrintScan: PR00364 IPR000767
|
269-283 | DISEASERSIST Disease resistance protein
|
YLESKRYLVVLDDVW |
| FPrintScan: PR00364 IPR000767
|
367-381 | DISEASERSIST Disease resistance protein
|
CKGLPLAIIALGGLM |
| Seg: seg | 369-380 | seg | GLPLAIIALGGL |
| Seg: seg | 440-451 | seg | LIRRKRLIRLWI |
| superfamily: SSF52058 | 496-910 | L domain-like,LRR | KMHDLMRELALSTSEKEKFSIVHDGKEVLEDIGARRLSIQTTQGGIESCIGMSRPRSFLVFVTGIFSFSFSKSLPSGFKLLRVLDLEDVQIDKLPHNLVYLFNLRYLSLKGTQIKELPKAIGLLRNLQTLNILNTKIEVLPRGISKLQNLRHLIMLRHSGEYMAFKTAHGTRVPFNISKLKKLEVLSCVESEGNIIRLIGNMTQLTRIGITNVKERDAMDLCDSIQKLKLLQCLALRVSGEEEFLDVNALSSPPPHLRKLIFGSKLQKVPPWFSSLQNLTYLYLHWTRLDEDLLPHIEALPCLGRLLLVNAYVGNELCFNRGFPKLTILELFNFPLLNKITIAEGVMRNLRLLTLARCMELKALPQGFEYLSKLETLELLSVSMQLIESIQEGGVDHPTVKHITVITNYSLKCLI |
| Gene3D: G3DSA:3.80.10.10 | 572-648 | no description | GFKLLRVLDLEDVQIDKLPHNLVYLFNLRYLSLKGTQIKELPKAIGLLRNLQTLNILNTKIEVLPRGISKLQNLRHL |
| Gene3D: G3DSA:3.80.10.10 | 672-875 | no description | ISKLKKLEVLSCVESEGNIIRLIGNMTQLTRIGITNVKERDAMDLCDSIQKLKLLQCLALRVSGEEEFLDVNALSSPPPHLRKLIFGSKLQKVPPWFSSLQNLTYLYLHWTRLDEDLLPHIEALPCLGRLLLVNAYVGNELCFNRGFPKLTILELFNFPLLNKITIAEGVMRNLRLLTLARCMELKALPQGFEYLSKLETLELL |
| FPrintScan: PR00364 IPR000767
|
840-856 | DISEASERSIST Disease resistance protein
|
GVMRNLRLLTLARCMEL |
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