PRGDB00075188 (Pth.5414)
| Pth.5414 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 224063934 (XM_002301273) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Populus trichocarpa |
DNA Sequence
ATGCCATCTCGCCACCTCCGATCTCTATCAGAaccaccaccaccaccactccaccaccacATCCGCCTCCTCCCTCCACTCCTTGCTGGAACACTAACGCTCATTCTCATTTTCCTTATTGTACTTGTAGTCTTGCTCTATCGCAAAATCACGCGCAACCGTACAGCTCCAATTACAAGATCTCCAAATcaccaccaccaccaccaATGCCGCTGCTACTCCTACTCTCTCCTCCGCCGTGCAACTTCCTCATTCTCACCATCCAACCGCCTCGGACACGGCGGATTTGGATCAGTCTACAAAGCTACACTTCCTAACACTAATCAACATTTAGCTGTTAAATTGATGGACCAAAACGGTTCTCTTCAAGGTGAGAGAGAGTTCCATAACGAACTCTCAATTGCTTCTTGTTTAGATTCTCCTAACATTGTGTCCCTCCTTGGCTACTCATGTTCGCGAAAGAAGAAATTAGTTTTAGTCTATGAGTTGATGGAGAATagaagcttacaagaagccttgtttgataggaaatgtgaagAGTTGATGAATTGGAAGGTTAGATTTGAGTTAGTGATTGGTGTAGCTAAAGGACTTGAGTATTTGCATCATTTTTGTAGTCCTCCGGTGATTCATGGGGATATTAAACCTGGTAATATCTTGCTTGATTCGTGTTTTAACGCGAAAATTGGAGATTTTGGTCTAGCGAGATTGAAGATTGAGGAGAGTAATGGTTTCCTGGAGAAGAAAGAGGGTTTTGGAGAGGATAATGGGTCGATTTTGGAGGAGACGGAGAGTGTGGCAAGTGGGTGCGGAGAGAGTGGGATTTTAGACGTTGGTGGTGTTGTGAGATCGCCGGAGAGTTTTGGTGTTAGGGTTTTGGATTCGGATGCGTCACCGGAGATGTTTTCAGTGGTTTCGCCGGAGGTTGGGGTGGATAAGGGGAGTGTATCGGAGGCGGGTTTTGATAAGATGAGTGTTGATAGTGGAAGAGATTTGATTGGTGGAGGGAAGAAAAGTGGGTCGAGGAGGGATTGGTGGTGGAAACAGGATAACGGAGGTGGATCGGAGTCGGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGAAGTGAGATTAATAAGGAGAGACCTAAGCAAGAATGGAATGCAGCGTCTCCAATTTCCAatgaggaaagaatgaagaagaaggagaagaatagaaagcctagagagtggtggaaggaggagTTTTGTGAGGAGCTGACGAAGAAAAAGAAGAAGAGAGGACTTAGTTCGAGTAATAGTGGAGATTTATGGTGGCAAAAGGATGATGATGGGGTGCAAGAAAGGAAGAAGAAGAGGAAGAGCAAGGGTAGTAGAGGTAGTATGGATCGGTGGTTGGATGGTTTCAGTGGTGAATTTAGAAATGGGAGAAGAAACAGCCAGGATTGGGCTAGTGGAGAGATCCCCAAGAGTGGTGGTATTAGTAGCACGCCTAGCATGAGAGGAACGGTGTGTTATATTGCTCCTGAATATGGTGGAGGTAGCCTGTTATCAGAGAAGTGTGATGTTTATAGTTTCGGTGTTCTGCTCCTTGTGGTGGTTTCTGGGAGAAGACCGCTGCAAGTAACCGCCTCACCAATGTCAGAATTTGAGAGGGCTAATCTAATCTCTTGGGCCAGGCAACTTGCATACAATGGGAAGCTATTGGATATTGTTGATACTTCAGTGCATTCGTTGGATAAGGATCAGGCATTGCTTTGCATTACAATTGGTCTACTGTGTTTGCAGAAATCGCCTAGCAAACGGCCCACGATGAAAGAAATTGTGGGGATGCTTTCTGGGGAGGCAGAGCCACCCCACTTGCCATTTGAATTTTCACCATCACCGCCGTCCAATTTTCCATTCAAATCCCGAAGAAAGGCTCGGTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Pth.5414 | translated coding region predicted by ESTScan from UniGene Pth.5414 | XAISPPPISIRTTTTTTPPPHPPPPSTPCWNTNAHSHFPYCTCSLALSQNHAQPYSSNYKISKSPPPPPMPLLLLLSPPPCNFLILTIQPPGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRRKAR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 3-28 | seg | ISPPPISIRTTTTTTPPPHPPPPSTP |
| Seg: seg | 64-80 | seg | SPPPPPMPLLLLLSPPP |
| superfamily: SSF56112 IPR011009
|
69-634 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PMPLLLLLSPPPCNFLILTIQPPGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRRK |
| ProfileScan: PS50011 IPR000719
|
85-617 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
ILTIQPPGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPF |
| HMMSmart: SM00219 IPR020635
|
85-606 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
ILTIQPPGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGML |
| HMMSmart: SM00220 IPR002290
|
85-606 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
ILTIQPPGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGML |
| HMMPfam: PF00069 IPR017442
|
91-242 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
PGHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEES |
| HMMPanther: PTHR24420:SF440 | 92-628 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | GHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFP |
| HMMPanther: PTHR24420 | 92-628 | FAMILY NOT NAMED,FAMILY NOT NAMED | GHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELMENRSLQEALFDRKCEELMNWKVRFELVIGVAKGLEYLHHFCSPPVIHGDIKPGNILLDSCFNAKIGDFGLARLKIEESNGFLEKKEGFGEDNGSILEETESVASGCGESGILDVGGVVRSPESFGVRVLDSDASPEMFSVVSPEVGVDKGSVSEAGFDKMSVDSGRDLIGGGKKSGSRRDWWWKQDNGGGSESGRVKDYVMEWIGSEINKERPKQEWNAASPISNEERMKKKEKNRKPREWWKEEFCEELTKKKKKRGLSSSNSGDLWWQKDDDGVQERKKKRKSKGSRGSMDRWLDGFSGEFRNGRRNSQDWASGEIPKSGGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFP |
| Gene3D: G3DSA:3.30.200.20 | 92-164 | no description | GHGGFGSVYKATLPNTNQHLAVKLMDQNGSLQGEREFHNELSIASCLDSPNIVSLLGYSCSRKKKLVLVYELM |
| PatternScan: PS00108 IPR008271
|
209-221 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIHGDIKPGNILL |
| Seg: seg | 389-409 | seg | NEERMKKKEKNRKPREWWKEE |
| Seg: seg | 443-455 | seg | RKKKRKSKGSRGS |
| Gene3D: G3DSA:1.10.510.10 | 486-633 | no description | GGISSTPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRR |
| HMMPfam: PF00069 IPR017442
|
490-603 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
STPSMRGTVCYIAPEYGGGSLLSEKCDVYSFGVLLLVVVSGRRPLQVTASPMSEFERANLISWARQLAYNGKLLDIVDTSVHSLDKDQALLCITIGLLCLQKSPSKRPTMKEIV |
| Seg: seg | 522-528 | seg | VLLLVVV |
| Seg: seg | 612-631 | seg | PPHLPFEFSPSPPSNFPFKS |
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