PRGDB00078133 (Tcc.767)
| Tcc.767 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 212153999 (CU550757) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Theobroma cacao |
DNA Sequence
CGGGGACCTAAAGCTGGCAATAACTGTTCTACTGTCTTTCCAGAGCCTCTTTCTCTCCCACCAGATGGTCTAAAAGCTCAATCGGACTATGGATCAAAAGGTCATCGTGTAGCTGTTGCTTTTGGTGCAAGCTTTGGTGCTGCTTTTTTCATCATACTATTTATAGGATTACTTGTTTGGTGGCGCTATAGACACAACCAGCAGATTTTCTTTGATGTCAATGAACAATATGACCCGGAAGTATGCTTGGGCCATTTGAAAAGGTATACATTTAAAGAACTTAGGGCTGCTACTGACCATTTCAACTCCAAGAACATTCTAGGGAGAGGTGGATTTGGGATAGTGTACAAGGGATGCTTGAATGATGGGACTTTGGTGGCTGTTAAAAGGCTGAAGGACTATAACATAGCTGGTGGAGAAATCCAATTTCAGACAGAAGTAGAGACAATAAGTTTAGCTGTCCATCGCAATCTACTCAGGCTTTCTGGATTCTGCACAACTGAGAATGAAAGGCTCCTGGTTTACCCCTATATGCCAAATGGAAGTGTAGCTTCTAGACTAAGAGATCACATACATGGTCGGCCAGCTTTAGACTGGGCAAGGCGGAAGAGGATAGCCTTAGGTACAGCCAGGGGGCTTGTTTATTTGCATGAACAGTGTGACCCGAAAATTATTCACCGTGATGTCAAAGCTGCCAACATTTTGTTG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Tcc.767 | translated coding region predicted by ESTScan from UniGene Tcc.767 | RGPKAGNNCSTVFPEPLSLPPDGLKAQSDYGSKGHRVAVAFGASFGAAFFIILFIGLLVWWRYRHNQQIFFDVNEQYDPEVCLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF851 | 4-236 | SUBFAMILY NOT NAMED | KAGNNCSTVFPEPLSLPPDGLKAQSDYGSKGHRVAVAFGASFGAAFFIILFIGLLVWWRYRHNQQIFFDVNEQYDPEVCLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| HMMPanther: PTHR24420 | 4-236 | FAMILY NOT NAMED,FAMILY NOT NAMED | KAGNNCSTVFPEPLSLPPDGLKAQSDYGSKGHRVAVAFGASFGAAFFIILFIGLLVWWRYRHNQQIFFDVNEQYDPEVCLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| Gene3D: G3DSA:2.60.120.200 IPR013320
|
35-119 | no description Concanavalin A-like lectin/glucanase, subgroup
|
HRVAVAFGASFGAAFFIILFIGLLVWWRYRHNQQIFFDVNEQYDPEVCLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGC |
| Seg: seg | 37-59 | seg | VAVAFGASFGAAFFIILFIGLLV |
| superfamily: SSF56112 IPR011009
|
71-236 | Protein kinase-like (PK-like) Protein kinase-like domain
|
FDVNEQYDPEVCLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| ProfileScan: PS50011 IPR000719
|
101-236 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| HMMSmart: SM00220 IPR002290
|
101-236 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| HMMSmart: SM00219 IPR020635
|
101-236 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FNSKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| HMMPfam: PF00069 IPR017442
|
103-236 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
SKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| PatternScan: PS00107 IPR017441
|
107-129 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGRGGFGIVYKGCLNDGTLVAVK |
| Gene3D: G3DSA:3.30.200.20 | 120-173 | no description | LNDGTLVAVKRLKDYNIAGGEIQFQTEVETISLAVHRNLLRLSGFCTTENERLL |
| Gene3D: G3DSA:1.10.510.10 | 174-236 | no description | VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILL |
| PatternScan: PS00108 IPR008271
|
224-236 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDVKAANILL |
List of Contributions
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