PRGDB00078135 (Tcc.1119)
| Tcc.1119 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 212108051 (CU478179) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Theobroma cacao |
DNA Sequence
CGGGGATTCCAACAACTACCTCTCCCCACACCCATCTACTCTCCCACGCCCTTTGAATGCTAGGCCAAGCCAACCCCCTTCCTTCTTTATATTCTCGTCTCTACCATTTCAGGTCGACCCCAGAGCTTTTATTAGCACTACGTTTAACTCTTTCGATCAAATATAAACTAAATTTAACTCACCAGTCTGACTCTTTTTGCATCTTATCTCCCGAAGAAAGGAATGGCACCGGCTTCTTTCCATCACGAGAAAGTTTGCGTGATGGATGCCTCCGGTCGCCTTGGCTCCACCCTGGTTGAACGGTTGCTGCAAAGAGGCTACACTGTCCATGCTGCAGTTCAGGGCCACGGTGATTTGAAATTCAATGGGGTGGCAGCTGGTGAAAACAAGAAGCTGAAGGTTTTCCGTGCAGACCCTTTTGACTATCAGAGCATCATCGATGCTCTGAAAGGTTGCTCTGGTTTGTTTTACGCGTTTGAGCCTCCAGAAGACCACCTCGCCTATGATGAATTTATGGCAGAGGTGGAGGTAAGAGCAGCACACAATGTGATATAGGCATGCGCTCAGACGGATACGATAGACAAGGTGGTCTTCACGTCGTCTGCAACCGCTGTAGTTTGGAGAGACACCCCTCAATCTGTTGCTTCGGATTTGGATGAAAGGCACTGGAGCGATGAANATTTCTGTCGCAAATTCAAGTTGTGGGAAGCCCTATCAAAGACGCTGACAGAGAAGACAGCTTGGGCATTGGCAATGGACAGGGGCATCAACATGGTGTCCGTCAACGGGGGACTGTTGACG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Tcc.1119 | translated coding region predicted by ESTScan from UniGene Tcc.1119 | MAPASFHHEKVCVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDTPQSVASDLDERHWSDEXFCRKFKLWEALSKTLTEKTAWALAMDRGINMVSVNGGLLT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR10366:SF9 | 1-188 | CINNAMOYL-COA REDUCTASE,CINNAMOYL-COA REDUCTASE | MAPASFHHEKVCVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDTPQSVASDLDERHWSDEXFCRKFKLWEALSKTLTEKTAWALAMDRGINMVSVN |
| HMMPanther: PTHR10366 | 1-188 | FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE | MAPASFHHEKVCVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDTPQSVASDLDERHWSDEXFCRKFKLWEALSKTLTEKTAWALAMDRGINMVSVN |
| Gene3D: G3DSA:3.40.50.720 IPR016040
|
8-192 | no description NAD(P)-binding domain
|
HEKVCVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDTPQSVASDLDERHWSDEXFCRKFKLWEALSKTLTEKTAWALAMDRGINMVSVNGGLL |
| superfamily: SSF51735 | 9-191 | NAD(P)-binding Rossmann-fold domains | EKVCVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDTPQSVASDLDERHWSDEXFCRKFKLWEALSKTLTEKTAWALAMDRGINMVSVNGGL |
| HMMPfam: PF13460 | 12-136 | NAD_binding_10,NADH(P)-binding | CVMDASGRLGSTLVERLLQRGYTVHAAVQGHGDLKFNGVAAGENKKLKVFRADPFDYQSIIDALKGCSGLFYAFEPPEDHLAYDEFMAEVEVRAAHNVIXACAQTDTIDKVVFTSSATAVVWRDT |
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