PRGDB00078138 (Tcc.1922)

Tcc.1922
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	38499407 (CF973647)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Theobroma cacao
	Comment?

PSU_boln6F10 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence

DNA Sequence

GTTCTGCTTGTAACATAATGACATGGTGTATTAGCAGCATGGAACAAACAATTCTACCTTCCATCTCCAATAATATCAGCGAATTCAGTAACATTTGCTGGAGAGAGCACTGGTTCTGTCCCTGACATAGTCTTGCTCTTACCGCTCTTGATGTCACTGTTATCGGATGCAATGGATGTTTGTGTTTCTTCACTCATGAAGGTGCCTGTTATATCCTTAAAATGCCAATCAGTTAAATAACTTGGTTTTGACGTGACACTGCTCACTTCAATATCTCCAGCAAGCATAGCCACAACACGAGACGTGGGCGGCCGCATCGCTGGTGATGCCTGAGTGCATAAAAGTGCCACTCCTATCATTCGGAGAGCTTCATTTTCATCAAACTCCACTAAAGATGGATCCACCAGACCCAAGCTTTGGTTATTTTCATGCAGGGTCCATGCCCATTCAAGAAGATAAATCCTATCATTTTCTAGGCTATTGTCAGAGTTTGGNCTACCACTGACAATCTCCAAAGCAACAACACCAAAGNCAAAAACATCAGCCTTCTCAGTGAGATGNCCACGCATTGCATACTCCGGCGCCAGGTAACCAATGGGTCCAGCAACCCGAGTGCTGATGNGCGGTTTCTTGNCATCATAAAGCTTTGCCAATCCCAAAATCAGATATNTT

Protein sequences

Name	Description	Sequence
Tcc.1922	translated coding region predicted by ESTScan from UniGene Tcc.1922	XXYLILGLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAMLAGDIEVSSVTSKPSYLTDWHFKDITGTFMSEETQTSIASDNSDIKSGKSKTMSGTEPVLSPANVTEFADIIGDGRXNCLFHAANTPCHYVTSRT

Domains

Domain	Start-End	Description	Sequence
ProfileScan: PS50011 IPR000719	1-137	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	XXYLILGLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAMLAGDIEV
Gene3D: G3DSA:1.10.510.10	7-130	no description	GLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAM
HMMPfam: PF07714 IPR001245	7-73	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase	GLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIY
HMMPanther: PTHR24420:SF469	7-202	SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED	GLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAMLAGDIEVSSVTSKPSYLTDWHFKDITGTFMSEETQTSIASDNSDIKSGKSKTMSGTEPVLSPANVTEFADII
HMMPanther: PTHR24420	7-202	FAMILY NOT NAMED,FAMILY NOT NAMED	GLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAMLAGDIEVSSVTSKPSYLTDWHFKDITGTFMSEETQTSIASDNSDIKSGKSKTMSGTEPVLSPANVTEFADII
superfamily: SSF56112 IPR011009	7-177	Protein kinase-like (PK-like) Protein kinase-like domain	GLAKLYDXKKPXISTRVAGPIGYLAPEYAMRGHLTEKADVFXFGVVALEIVSGXPNSDNSLENDRIYLLEWAWTLHENNQSLGLVDPSLVEFDENEALRMIGVALLCTQASPAMRPPTSRVVAMLAGDIEVSSVTSKPSYLTDWHFKDITGTFMSEETQTSIASDNSDIKS

List of Contributions

There has not been any contribution yet.

Add a Contribution

Analyses

Blast

Blast matches against Reference R-Genes. Show