PRGDB00150850 (Cucsa.001610.1)
| Cucsa.001610.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | NBS |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGGACGATTATTGGAAAGAATTGCAAGGCAAAAGACTTCACGATCCTCTCACCAAAAATCAAGTCAGCCCAATTCCACAAATTTTGGTTCAAGGGCCTCTCATCGTTGGTGCCGGACCGTCGGGCTTAGCGGTCGCAGCATGTCTAAAGCAAAAGGGTATCCAAAGTTTGATCCTTGAAAGAGCCGAATGTATAGCTTCATTATGGCAGTTCAAGACATATGACCGTCTTCGCTTGCATCTTCCAAAGCCATTTTGTCAGCTCCCATTCATGCCTTTCCCTTCACATTTCCCCACTTACCCAACAAAGCAACAATTTTTAAGCTATTTGAAAGCCTATGCTGATTATTTTAAGTTGAAGACGGTGTTTAATAGCACAGTTATAAGGGCAGAGTGGGATGAGAGATGTGGGTTTTGGAAAGTGAAATCAGTTAAAGACCAAAAGGTTATTGTTGAGTATTTTTGTAAGTGGTTGATTGTGGCAACGGGTGAAAATGCTGAAGAGATTATTCCTCAAATTGAAGGGTTAGAGATATTTGAAGGCCCTGTTGTTCATACTAGCTCTTATAAGACAGGTGAAGTGTTTCATGGGAAGAAAGTTTTGGTTATTGGTTGTGGTAATTCTGGAATGGAAGTTTGTCTTGATTTATGTAACTTCAACGCGTCCCCTCACCTCGTCGTGCACATTCTACCTCATGAGATATTGGGAAGATCAACATTTGGGTTGTCCATGTGCTTGCTCAGATGGCTTCCCATGCGTATAGTGGATCAATTTCTTCTTCTTGTTTCACGTTTGATGTTAGGAGATACATCTAAATTGGGGCTTCATCGTCCAAAACTTGGCCCTTTACAGCTCAAGAATCTGTCTGGAAAAACGCCTGTTTTAGATGTTGGCACTTTTGCAAAAATCAAAACCGGCAAGATTAAGGTTCGTCGAGGAGTGACAAGACTAACCCGCCATGCCGCTGAGTTCGTTGATGGCAGCCTCGAAAATTTTGATGCTGTCATTTTGGCCACTGGTTATAAAAGTAATGTACCCTCTTGGCTAAAGGAAAGGCATATGTTTGATGAGAAAGATGGAATGCCAAGGAAGGAATTTCCAAATGGATGGAAAGGTGAATGTGGACTATATGCAGTTGGGTTCACAAAGAGAGGGCTACTTGGAGCTTCAATGGATGCAAAAAGAATAGCTGAAGATATTGAACTTTGTTTGGAAAATTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.001610.1 | Flavin-binding monooxygenase family protein (best arabidopsis hit) | MDDYWKELQGKRLHDPLTKNQVSPIPQILVQGPLIVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEVCLDLCNFNASPHLVVHILPHEILGRSTFGLSMCLLRWLPMRIVDQFLLLVSRLMLGDTSKLGLHRPKLGPLQLKNLSGKTPVLDVGTFAKIKTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVPSWLKERHMFDEKDGMPRKEFPNGWKGECGLYAVGFTKRGLLGASMDAKRIAEDIELCLEN* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23023:SF5 | 27-401 | MONOOXYGENASE,MONOOXYGENASE | QILVQGPLIVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEVCLDLCNFNASPHLVVHILPHEILGRSTFGLSMCLLRWLPMRIVDQFLLLVSRLMLGDTSKLGLHRPKLGPLQLKNLSGKTPVLDVGTFAKIKTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVPSWLKERHMFDEKDGMPRKEFPNGWKGECGLYAVGFTKRGLLGASMDAKRIAEDIE |
| HMMPanther: PTHR23023 | 27-401 | FAMILY NOT NAMED,DIMETHYLANILINE MONOOXYGENASE | QILVQGPLIVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEVCLDLCNFNASPHLVVHILPHEILGRSTFGLSMCLLRWLPMRIVDQFLLLVSRLMLGDTSKLGLHRPKLGPLQLKNLSGKTPVLDVGTFAKIKTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVPSWLKERHMFDEKDGMPRKEFPNGWKGECGLYAVGFTKRGLLGASMDAKRIAEDIE |
| FPrintScan: PR00469 IPR000103
|
32-54 | PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla
|
GPLIVGAGPSGLAVAACLKQKGI |
| FPrintScan: PR00368 IPR013027
|
33-52 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
PLIVGAGPSGLAVAACLKQK |
| superfamily: SSF51905 | 34-311 | FAD/NAD(P)-binding domain | LIVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEVCLDLCNFNASPHLVVHILPHEILGRSTFGLSMCLLRWLPMRIVDQFLLLVSRLMLGDTSKLGLHRPKLGPLQLKNLSGKTPVLDVGTFAKIKTGKIKVR |
| Gene3D: G3DSA:3.50.50.60 | 35-212 | no description | IVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEV |
| HMMPfam: PF00743 IPR020946
|
35-346 | FMO-like Flavin monooxygenase-like
|
IVGAGPSGLAVAACLKQKGIQSLILERAECIASLWQFKTYDRLRLHLPKPFCQLPFMPFPSHFPTYPTKQQFLSYLKAYADYFKLKTVFNSTVIRAEWDERCGFWKVKSVKDQKVIVEYFCKWLIVATGENAEEIIPQIEGLEIFEGPVVHTSSYKTGEVFHGKKVLVIGCGNSGMEVCLDLCNFNASPHLVVHILPHEILGRSTFGLSMCLLRWLPMRIVDQFLLLVSRLMLGDTSKLGLHRPKLGPLQLKNLSGKTPVLDVGTFAKIKTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVP |
| FPrintScan: PR00368 IPR013027
|
155-173 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
CKWLIVATGENAEEIIPQI |
| FPrintScan: PR00469 IPR000103
|
195-219 | PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla
|
FHGKKVLVIGCGNSGMEVCLDLCNF |
| FPrintScan: PR00368 IPR013027
|
199-217 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
KVLVIGCGNSGMEVCLDLC |
| Gene3D: G3DSA:3.50.50.60 | 300-357 | no description | FAKIKTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVPSWLKERHMFDE |
| superfamily: SSF51905 | 304-402 | FAD/NAD(P)-binding domain | KTGKIKVRRGVTRLTRHAAEFVDGSLENFDAVILATGYKSNVPSWLKERHMFDEKDGMPRKEFPNGWKGECGLYAVGFTKRGLLGASMDAKRIAEDIEL |
List of Contributions
There has not been any contribution yet.
