PRGDB00150852 (Cucsa.004440.1)

Cucsa.004440.1
Gene Type	Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Pennisetum glaucum
	Comment?

Malectin/receptor-like protein kinase family protein (best arabidopsis hit)

DNA Sequence

ATGGAGATTAAAGAAAAGAAGAGAACTTCGACTATCTCCTCTCCATTAATGTCATCTTCTTCGATGGCTATCCTCCTGGTTTTTCTCTGTTTCATTTTTAACTGTCCAAACATCGCATTTGCTACCGGCCCCGGCGCTTCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAACAAGGAAGTTGGTGCACTCCCTGATGGGAGAGTTTTCAAAACTGATGAGCAATCCAAGCAATACTTAGATGCCAAGGATGACATTATAGCAACCGCTACGCCGGAGATGAAGGCACCGTCGCCAGTCGATTTGACAGCCAGAGTCTTCCTCCAAGAAGCTACTTACATTTTTCAAATGGCAGAGCCTGGATGGCATTGGCTACGCCTACATTTCCTTCCTGTTAAAAGCAATGACTTTGATCTCTTGCAAGCCAAATTTTCAGTAGCTACTGAAAATTATGTGTTGCTTCATAGCTTTAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTCTCAATCAAGTTCTTGCCTATGAGGAATTCAGCTGCTTTCATCAACGCCATCGAGGTCGTCTCGGCTCCTGTGGACTTGATTGCCGATTCCAACGTGGAGTTGTCTCCAGTTGGAACTATTGAGGGCCTGTCAAAATATGCATTTCAGACACTGTATAGGTTAAACATGGGAGGTCCTATAATTACTCCAAGAAATGACACTCTTGGGAGAACATGGGAGACAGATGAAGTTTATAGGACACCGAAAGCTGCTGGTAGTAGTGTGGTTGTTCAGACTAATAGCATCAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCAAGTGTGTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTGTACCAAATTTCAATATCACGTGGAAATTTGAAGCAGATCCCTCATTTGGGTATCTAGTTCGCTTCCATTTTTGTGATATTGTCAGCAAAGTACTCAATGATATCTATTTCAATGTTTATGTAAATGGGAAAGCTGCTATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATATTACAAGGATGTTGTGGTTAATGCTTCCTTGATTGTAGATGGACTGACAGTTCAAATTAGTCCGGCTAATGTCGATACCGGTGATTCGAATGCCATTCTAAATGGTATAGAGGTATTGAAAATAAGCAACTCTGTTAATAGTTTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGATCTAACCGTGGGACAGTTGCTGCCGTTGGGTTTGCAATGATGTTTGGAGCGTTTGTTGGGCTCGGCGCGATGGTGATGAAATGGCATAAAAGGCCTCAGGATTGGCAGAAGAGGAACAGTTTCTCTTCTTGGTTGCTTCCTGTACATGCTGGTGATTCAAGCTTTATGACAAGCAAGACTTCATATGGATCACATAAGACCAACATTTATTCCTCTACTTTAGGCCTTGGTAGGTTCTTTACTTTGGCAGAACTTCAAGAAGCCACCAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACTAAAGTAGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATAACAGAATTCCAAACAGAAATTCAAATGCTTTCAAAACTTAGACATAGGCATTTGGTTTCTTTGATTGGGTACTGTGATGAAAATGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGTCCATTCAGAGATCACTTATATGGAAAGGACATATCTCCATTGTCATGGAAGCAAAGGCTGGAGATTTGTATCGGGGCAGCTCGAGGTCTCCATTACCTGCACACAGGAACAGCACAAGGAATCATTCACCGTGACGTCAAAACAACCAACATTTTACTCGACGAAAACTTCACCGCGAAAGTTGCCGATTTCGGATTGTCGAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACAGCAGTGAAAGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGACAACAGTTAACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTAGCTGATTGGGCAATGCAGTGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCACTTCTAGTTGGAGCTATAAATCCTGAGTCCATGAAAAAGTTTGCAGAAGCATCAGAGAAATGTCTAGCTGAACATGGTGTAGACAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTACAAGAAGCTTTCTCACAAGGCAAAACTGAAGACGAAAACAAAGCTGCAAGTACGACGGCAACTGTCACCCCGGCCACACCTCCCGCTGTCGAAGCTTCGACAAATGCATCGAACTCCGACAACCGCTCTGTCGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTTCAAGCCATTGATGATCATTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA

Protein sequences

Name	Description	Sequence
Cucsa.004440.1	Malectin/receptor-like protein kinase family protein (best arabidopsis hit)	MEIKEKKRTSTISSPLMSSSSMAILLVFLCFIFNCPNIAFATGPGASFIPKDNFLIDCGANKEVGALPDGRVFKTDEQSKQYLDAKDDIIATATPEMKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVATENYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLSKYAFQTLYRLNMGGPIITPRNDTLGRTWETDEVYRTPKAAGSSVVVQTNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLVRFHFCDIVSKVLNDIYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVDTGDSNAILNGIEVLKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAASTTATVTPATPPAVEASTNASNSDNRSVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR*

Domains

Domain	Start-End	Description	Sequence
Seg: seg	9-25	seg	TSTISSPLMSSSSMAIL
HMMPanther: PTHR24420	46-865	FAMILY NOT NAMED,FAMILY NOT NAMED	ASFIPKDNFLIDCGANKEVGALPDGRVFKTDEQSKQYLDAKDDIIATATPEMKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVATENYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLSKYAFQTLYRLNMGGPIITPRNDTLGRTWETDEVYRTPKAAGSSVVVQTNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLVRFHFCDIVSKVLNDIYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVDTGDSNAILNGIEVLKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAASTTATVTPATPPAVEASTNASNSDNRSVVQPEQNRQPAEVQAIDDHSGSA
HMMPanther: PTHR24420:SF550	46-865	SUBFAMILY NOT NAMED	ASFIPKDNFLIDCGANKEVGALPDGRVFKTDEQSKQYLDAKDDIIATATPEMKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVATENYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLSKYAFQTLYRLNMGGPIITPRNDTLGRTWETDEVYRTPKAAGSSVVVQTNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLVRFHFCDIVSKVLNDIYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVDTGDSNAILNGIEVLKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAASTTATVTPATPPAVEASTNASNSDNRSVVQPEQNRQPAEVQAIDDHSGSA
HMMPfam: PF12819 IPR024788	56-412	Malectin_like,Carbohydrate-binding protein of the ER Malectin-like carbohydrate-binding domain	IDCGANKEVGALPDGRVFKTDEQSKQYLDAKDDIIATATPEMKAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPVKSNDFDLLQAKFSVATENYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLSKYAFQTLYRLNMGGPIITPRNDTLGRTWETDEVYRTPKAAGSSVVVQTNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLVRFHFCDIVSKVLNDIYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVDTGDSNAILNGIEVLKI
Seg: seg	438-456	seg	VAAVGFAMMFGAFVGLGAM
superfamily: SSF56112 IPR011009	494-801	Protein kinase-like (PK-like) Protein kinase-like domain	YGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYALQLQE
Gene3D: G3DSA:3.30.200.20	511-585	no description	FFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIG
HMMSmart: SM00220 IPR002290	524-796	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	FDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYA
HMMSmart: SM00219 IPR020635	524-793	Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain	FDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNL
ProfileScan: PS50011 IPR000719	524-796	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	FDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWNLEYA
HMMPfam: PF07714 IPR001245	528-788	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic	SIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGD
PatternScan: PS00107 IPR017441	530-552	PROTEIN_KINASE_ATP Protein kinase, ATP binding site	IGVGGFGNVYLGVIDEGTKVAVK
Gene3D: G3DSA:1.10.510.10	586-792	no description	YCDENAEMILVYEFMSNGPFRDHLYGKDISPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEASEKCLAEHGVDRPSMGDVLWN
PatternScan: PS00108 IPR008271	644-656	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	IIHRDVKTTNILL
Seg: seg	814-833	seg	AASTTATVTPATPPAVEAST

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Analyses

Blast

Blast matches against Reference R-Genes. Show