PRGDB00150856 (Cucsa.005470.1)
| Cucsa.005470.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGGAAGCATTAAAGGACATAAATAACAACAGAGACCTATTAAATATATATATGAATAACAACGTACTAAGTCTTCCCACACCAAAAACAGAAGGTGAAATACTGTCATCTTCGAATTTGAAGCCTTTCTCTTTCAATGAGCTCAAGAGTGCTACTAGAAATTTTCGACCTGATAGCTTGCTAGGTGAAGGGGGATTTGGTTATGTTTTCAAAGGATGGATTGATGAAAATACATGGGCCGCAGCGAGGCCGGGAATGGGAATGGTTGTTGCAGTCAAGAAGCTTAAGCCTGAAGCTTCCCAAGGCCACAAGGAGTGGTTGACAGAAGTTAATTATTTGGGCAAATTTCATCATCCAAATCTAGTTAAGCTGATTGGGTATTGCTTGGAAGGCGAGAATCGTTTATTGGTATACGAGTTTTTGCCAAGAGGGAGCTTGGAGAATCATCTCTTCAGAAGGGGTTCCCAGCCTCTTTCTTGGGCACTGAGGATCAAAGTGGCAATAGCTGCTGCCAGAGGGCTTTCCTTTCTCCATGAAGCCGAATCACCTGTTATATATCGCGATTTTAAGGCATCCAACATCCTACTTGATGCAGAATTTAATGCAAAGCTTTCTGATTTTGGTTTGGTAAAGGCTGGTCCAACTGGAGATAGAACTCATGTAACTACTCAAGTTATCGGGACCCGTGGCTATGCTGCACCTGAATATATTGCTACAGGTCGACTGACATCCAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTGCTCGAATTGTTGTCAGGTCAACGTGCTGAGGACAATCTTGTTGAGCGGGCAAGCCCTTATTTGGGTGATAAAAGAAAGTTATTCCGAATTATGGACACCAAACTCGAAGGACGATATTCTAAAAAGGGAGCTTATGTAGCTGCAAATTTAGCTTCACAATGTCTTACGAGTGAACCGAGGGCCCGACCTCGAATGGCAGAAATTTTGGGTGCATTGGAGGAACTTGAAACCCCCAAAACTCCAGCTAGAATCTCGCATTCAGTTCAACGTAGTACTCCTACTTTGTCAAACTCGAACCCTGATGGGTCTCTCTCGAAACCGCATCAGAAGTCACCACAACAATAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.005470.1 | protein kinase 2B (best arabidopsis hit) | MEALKDINNNRDLLNIYMNNNVLSLPTPKTEGEILSSSNLKPFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGALEELETPKTPARISHSVQRSTPTLSNSNPDGSLSKPHQKSPQQ* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 25-346 | FAMILY NOT NAMED,FAMILY NOT NAMED | LPTPKTEGEILSSSNLKPFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGALEELETPKTPARISHSVQRS |
| HMMPanther: PTHR24420:SF897 | 25-346 | SUBFAMILY NOT NAMED | LPTPKTEGEILSSSNLKPFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGALEELETPKTPARISHSVQRS |
| superfamily: SSF56112 IPR011009
|
27-350 | Protein kinase-like (PK-like) Protein kinase-like domain
|
TPKTEGEILSSSNLKPFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGALEELETPKTPARISHSVQRSTPTL |
| Gene3D: G3DSA:3.30.200.20 | 36-126 | no description | SSSNLKPFSFNELKSATRNFRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIG |
| ProfileScan: PS50011 IPR000719
|
55-330 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGALEEL |
| HMMSmart: SM00220 IPR002290
|
55-327 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGAL |
| HMMSmart: SM00219 IPR020635
|
55-327 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FRPDSLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGAL |
| HMMPfam: PF07714 IPR001245
|
59-325 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
SLLGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKKLKPEASQGHKEWLTEVNYLGKFHHPNLVKLIGYCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILG |
| PatternScan: PS00107 IPR017441
|
61-94 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGEGGFGYVFKGWIDENTWAAARPGMGMVVAVKK |
| Gene3D: G3DSA:1.10.510.10 | 127-326 | no description | YCLEGENRLLVYEFLPRGSLENHLFRRGSQPLSWALRIKVAIAAARGLSFLHEAESPVIYRDFKASNILLDAEFNAKLSDFGLVKAGPTGDRTHVTTQVIGTRGYAAPEYIATGRLTSKSDVYSFGVVLLELLSGQRAEDNLVERASPYLGDKRKLFRIMDTKLEGRYSKKGAYVAANLASQCLTSEPRARPRMAEILGA |
| PatternScan: PS00108 IPR008271
|
184-196 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIYRDFKASNILL |
List of Contributions
There has not been any contribution yet.
