PRGDB00150861 (Cucsa.007850.1)
| Cucsa.007850.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGGAAAATAAGGCGAGTGTGATGGTTCAACGATATGAATTAGGGAGATTGCTTGGCCAAGGAACGTTTGCGAAGGTATATTATGCGAGGAATACAGGAAGCAACCAAAGTGTGGCCATTAAGGTGATTGATAAGGAAAAGATTACCAAGGCTTCACTAATCGATCAGATTAAGCGTGAAATATCTATTATGAGACTTGTTAGACATCCCAATATTCTTCGTCTATATGAGGTTATGGCTACCAAGACTAAGATCTACTTTGTTTTGGAATATGCCAAAGGTGGTGAGCTCTTTGATAAGGTTGCTAAAGGGAAGCTGAAGGAGGACGTTGCTTGGAAATACTTTTATCAGTTAATTAATGCTGTTGATTTTTGTCACAGTAGGGGAGTGTATCACCGCGATATAAAGCCAGAGAACCTACTGCTTGATGAAAATGAGAATCTTAAGGTGTCTGATTTTGGTTTAAGTGCTTTAGCTGAGTCCAAGCGTCAAGACGGTTTGCTACACACGACTTGTGGAACACCAGCTTATGTTGCTCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCCAAAGCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCCTATTGGCAGGTTATCTCCCATTCCACAATTCGAATTTGATGGAAATGTATAGGAAGATCGGAAAAGCAGAGTATAAATGCCCCAGTTGGTTTCCTCGTGAAGTGCGGCGGCTGCTAAGCAGGATGCTTGATCCAGACCCCAATACTAGGACTTCAATAGCATTGATAAGACAAAGTTCTTGGTTCAAAAAGGGATTGAGGTCTAAGAATGCAAGAAGTGGGGTAGAAAGCAATGCTGTAGCACCTGAAGATGCCACGGCTGGTTCCGGACCATCTGAGGGAAGTGTGGCAGCAGATGGAAATCAAGAGCCAGATAGACCTCCAACTTTGAATGCTTTCGATATCATCTCCCTTTCCGCTGGCTTCAATTTATCCAGTTTATTTGAAGACAATTCAAAGAAGAAAGAAACATTGTTTACTTGTAGAAAACCAGCCTCTGTTATTCTCTCAAAACTAGAAGAAATGGCTAAACTTCTTCGGTTTCGAGTACAGAAGAAGGAAGCAGGCCTATTAAAGTTTGAGGCGCTAACAGAGGGAAAAAAGGGGGCATTATCCATTGATACAGAGATCTTTGAGGTTACTCCATCTTTTTATTTAGTGGAAATGAAAAAATCAAATGGAGACACATTGGAATATCAGAAGGTATTGAAAGAAGACATTAGGCCAGCTCTAAAAGATATAGTATGGGTTTGGCGAGGAGAGCAAGAACAGCAGCAACAAGATCCACAGCCTCAGCCTCTCCAGCCACAGGATCAAGTTCGAGATCCTTATCCAGAGCAAGATGGTGCATCACAACCGCAATAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.007850.1 | SOS3-interacting protein 1 (best arabidopsis hit) | MENKASVMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWFKKGLRSKNARSGVESNAVAPEDATAGSGPSEGSVAADGNQEPDRPPTLNAFDIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQKKEAGLLKFEALTEGKKGALSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKVLKEDIRPALKDIVWVWRGEQEQQQQDPQPQPLQPQDQVRDPYPEQDGASQPQ* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24343 | 1-271 | FAMILY NOT NAMED,SERINE/THREONINE KINASE | MENKASVMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWFKKGLR |
| HMMPanther: PTHR24343:SF45 | 1-271 | SUBFAMILY NOT NAMED,SERINE/THREONINE-PROTEIN KINASE PTK1 | MENKASVMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWFKKGLR |
| Gene3D: G3DSA:3.30.200.20 | 4-108 | no description | KASVMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKE |
| superfamily: SSF56112 IPR011009
|
7-297 | Protein kinase-like (PK-like) Protein kinase-like domain
|
VMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWFKKGLRSKNARSGVESNAVAPEDATAGSGPSE |
| ProfileScan: PS50011 IPR000719
|
12-266 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWF |
| HMMPfam: PF00069 IPR000719
|
12-266 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
YELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWF |
| HMMSmart: SM00219 IPR020635
|
12-266 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWF |
| HMMSmart: SM00220 IPR002290
|
12-266 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWF |
| PatternScan: PS00107 IPR017441
|
18-41 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGTFAKVYYARNTGSNQSVAIK |
| PatternScan: PS00108 IPR008271
|
130-142 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VYHRDIKPENLLL |
| Seg: seg | 138-148 | seg | ENLLLDENENL |
| ProfileScan: PS50816 IPR018451
|
309-333 | NAF NAF/FISL domain
|
DRPPTLNAFDIISLSAGFNLSSLFE |
| HMMPfam: PF03822 IPR004041
|
311-369 | NAF NAF domain
|
PPTLNAFDIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQK |
| Gene3D: G3DSA:1.10.510.10 | 435-436 | no description | WR |
| Seg: seg | 438-456 | seg | EQEQQQQDPQPQPLQPQDQ |
List of Contributions
There has not been any contribution yet.
