PRGDB00150868 (Cucsa.010850.1)
| Cucsa.010850.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGGGATCTTGTGTTAGTGTTCCTGCAATCGACAATCGATCCCCTTTTCATGGAATCGATTCCAATGGTTCCACCTCCTCTGCTTCTGTTCATCCAAGTCCAAGAACAGAGGATGAGATTCTGCAGTCTCCAAATCTAAAGAGATTTTGCTTTAACGAACTCAAAAAGGCGACCGGTAACTTCCGACAACGGAGTATGGTGGGGGAAGGTGGGTTTGGGAGTGTGTTCAAGGGTTGGATTGATCACCACTCTCTTGCCGCTACCAAGCCTGGCTCCGGCATCGCGATTGCTGTCAAAAGACATAATCAAGAGGGCTTCCAAGGCCACAATGAATGGTTGGCGGAAATCAATTATTTGGGGCAGTTGCATCATCCAAATTTGGTGAAATTGATTGGTTATTGCTTGGAGAATGAGGATCAGCTTCTTGCTTATGAATTTATGTCAAAAGGAAGCTTGGATAATCACCTTTTTGGAAGAGGATCTGGATCTCAACCACTTTCATGGAAGTTGCGTATGAAAATTGCATTGGACGCAGCTAAAGGATTGGCGTATTTACATGGCAAAAAAGTTATCCATCGTGATTTCAAATCATCAAACATCTTGCTCGATGCGAATTATGATGCAAAGATATCGGACTTCGGATTAGCTAAGGACGGCCCGGTGGGAAATGAAAGTCATGTTTCTACAAGATGTATGGGCACTTATGGTTATGCAGCTCCTGAATATATGGCCACAGGTCATTTGACACCCAAGAGCGACGTATACAGTTTCGGAGCAGTTCTATTGGAGATACTATGCGGAAGACGAGCATTGGATGCGACAAAGGCAGGAAGAGAGCAAAACCTAGTAGAATGGGCAAAGCCAAATATTAGCAACAGAAGAATAATGAGAATTATGGACAATAGAATTGAGGGAGAATGTGGTGTAAAGAAGGCAATAACAGCAGCTAAACTTGCTTTTAAATGCCTCTCTGATGACCCAAAACATAGACCTTCAATGTATCAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.010850.1 | Protein kinase superfamily protein (best arabidopsis hit) | MGSCVSVPAIDNRSPFHGIDSNGSTSSASVHPSPRTEDEILQSPNLKRFCFNELKKATGNFRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF861 | 32-335 | SUBFAMILY NOT NAMED | PSPRTEDEILQSPNLKRFCFNELKKATGNFRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| HMMPanther: PTHR24420 | 32-335 | FAMILY NOT NAMED,FAMILY NOT NAMED | PSPRTEDEILQSPNLKRFCFNELKKATGNFRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| superfamily: SSF56112 IPR011009
|
33-335 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SPRTEDEILQSPNLKRFCFNELKKATGNFRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| Gene3D: G3DSA:3.30.200.20 | 42-133 | no description | QSPNLKRFCFNELKKATGNFRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGY |
| HMMSmart: SM00219 IPR020635
|
61-335 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| HMMSmart: SM00220 IPR002290
|
61-335 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| ProfileScan: PS50011 IPR000719
|
61-335 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FRQRSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMYQ |
| HMMPfam: PF07714 IPR001245
|
64-334 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
RSMVGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVKRHNQEGFQGHNEWLAEINYLGQLHHPNLVKLIGYCLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPSMY |
| PatternScan: PS00107 IPR017441
|
67-99 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
VGEGGFGSVFKGWIDHHSLAATKPGSGIAIAVK |
| Gene3D: G3DSA:1.10.510.10 | 134-332 | no description | CLENEDQLLAYEFMSKGSLDNHLFGRGSGSQPLSWKLRMKIALDAAKGLAYLHGKKVIHRDFKSSNILLDANYDAKISDFGLAKDGPVGNESHVSTRCMGTYGYAAPEYMATGHLTPKSDVYSFGAVLLEILCGRRALDATKAGREQNLVEWAKPNISNRRIMRIMDNRIEGECGVKKAITAAKLAFKCLSDDPKHRPS |
| PatternScan: PS00108 IPR008271
|
190-202 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIHRDFKSSNILL |
| Seg: seg | 289-303 | seg | NISNRRIMRIMDNRI |
List of Contributions
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