PRGDB00172374 (ppa018586m)
| ppa018586m | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | RLP |
| Domain Type | Ser-Thr Kinase, LRR |
| Gene Species | Prunus persica |
DNA Sequence
GCTGTTTTCATATCCTTGAAGGGGGCATGGACGAATCTTCCACCCAGCTGGAACGACAAGTCAAATGATCCCTGTGGAATGAACTGGGAAGGAGTCACCTGCAACAATTCGAGGGTGACCGCATTGGGATTATCAGCAATGGACTTGAAAGGACAAATTGAAGGCGATATCGGGGGACTCTCTGAATTAAGATCCTTGGACCTTTCATTCAACAAAGGCCTCACGGGTTCTCTGTCTCCACGATTAGGAGATCTGAGCAAGTTAAATATCCTGATCCTAGCGGGCTGCGGCTTCAGTGGCAATATTCCAGAGGAATTGGGCAATCTTGGAGAGCTAACTTTCTTGGCTCTGAATACGAATAAATTTACTGGTCAAATACCTCCTTCTTTGGGTAAACTCTCCAAACTTAACTGGTTGGACCTGGTAGACAATCAGTTGACTGGAACTCTACCAATTTCAACCCCCCTTACCTCAGGCTTAGACAATTTATTGAAGGCTGAACACTTCCATTTCAGCAAGAACAACCTTTCAGGTACCATTCATCCCAAACTTTTCAGCTCTAAGATGAAACTGATACACATTTTGTTTGATGGAAATCAATTTATTCGGGAGATTCCATCAACCATAGCACTCGTTCAGACTCTTGAGGTTCTTCGGCTTGATAGAAATGCTCTGACAGGAAATGTCCCCTCAAATATCAGCAACCTAACACATGTCAATGAACTAAATTTGGCTCACAACAAATTGACAGGCCCTTTACCTGACTTAACTGGAATGAGGTCCCTCCATACTGTAGACCTGAGTAACAACTCATTTGACCCATCAGAAGCTCCACTTTGGTTCTCGAACTTACCCTCAATCACCACTATCGTTTTAGAATTTGGAGCACTTGAAGGGACTGTGCCAGAGAAGATGTTCGGCATCAAAACATTGCAGCAAGTGAAACTGAAAAACAATGCGTTTAACGATACATTGAACTTGGGTGATAGCATCAGTCCACAACTGCAGCTTGTTGATCTGCAGCACAATCAGATTCCTAAAATAACTCTGGGTTATAAATACAAACATACATTAATACTTGTAGAGAACCCATTTTGCACCAGTGGAACTGCCGTCACTAAATTCTGTCAGCTTCCGCAACAAGATACAGAAACGTATACTACTAGCTCGAATTGTGCACGCATTACATGCCCCGATAATCAGAAGCCCAGCCCTCAGAGTTGTCAATGTGCATATCCTTTCAAAGGAACATTGTATTTCAGAGCACCCCCTTTCAGGGAATTGCCAAATGTGACTATGTTTCACGCACTAGAAACGATTCTATGGGAAATACTTGGCCTCATTCCTGGTTCAGTTTCTCTTGAAAACCCTTTCTTCGACAATCATGACTATCTTCAAATTCAGCTGGCACTCTTTCCACCTACAGGAATGTATTTTAATAGGTCAGAGATTATGAGGATTGGTTTAGATTTGAACTACCAAAATCAAAAGCCACCGGAGGGGTTTGGACCCTATTATTTTATTCCATATCCTTATACTTTCCCGGGTGGGAATAAAAGTTCTATGAGCACTGGTGTTATTATTGGGACATCAGTTAGTTGTGTAGCTCTTGTACTGGGCCTCGTGGTAGTGGGAATATATGCCATTAGGCAAAAGAAACGTGCAGAAAGAGCCATTGGATTAAGCCGACCTTTTGCTTCTTGGGCACCAAGCGGAAAAGACAGTGGTGGAGCACCACAGTTAAAGGGAGCAAGATGTTTTTCTTTTGATGAGCTTAAGAAATGCACAAATAATTTCTCTGACAGTAATGAGATAGGATCTGGTGGATACGGGAAGGTTTACAGGGGCATGCTTTCTGATGGACAAGTGGTGGCAATCAAAAGAGCTCAGCAAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACTGAAATCGAGTTGCTCTCGCGAGTTCATCACAAAAATGTTGTTGGCCTTTTGGGATTTTGTTTTGAACAAGGAGAACAGGTGCTGGTATATGAGTTTATTCCGAATGGAACACTCAGGGAAAGCTTGTCAGGGAGATCTGGTATTCATCTTGATTGGCAGAGGAGACTCCGCATCACTCTTGGCTCGGCAAGAGGACTAGCTTACCTACATGAGCTTGCAAATCCTCCTATAATTCACAGAGATGTGAAGTCCGCCAACATTCTATTAGATGAACATTTAACCGCGAAGGTTACAGATTTCGGCTTGTCCAAGCTGGTAGCTGACAGTGGAAAAGGGCATGTCTCAAGTCAGGTCAAAGGCACAATGGGATATCTTGATCCTGAATACTACACGACTCAACAGTTAACTGAGAAGAGTGATGTATACAGCTTTGGAGTAGTGATGCTTGAATTGATTACGGCTAGGAAGCCTATTGAGATGGGAAAATACATCGTCCGCCAGGTACAAATGATGATGGACAAGAATGATGAAGAACACTATGGTTTGAGGGAGTTAATGGATCGAAGCATTCGAAACTCTGGAACTCTTACTGGGTTTGGGAGGTTCCTGGAGCTGGCCCTGCAATGCGTTGAAGAATCAGCTGCAGACCGCCCCACAATGAGTGAGCTTGTGAAGGCTATTGAAACCATTCTGCAGAATGATGGCATGAACACAAACTCAACATCAGCATCTTCATCAGCCACAGAATTTGCAGCATCAAAAGGAGCTCCTAAGCATCCATACAACGATGGCTTGCCGAAAAAGGAAGTGAATGACAGCACTGGTGCCTTTTATTACAGTAGTGGATACGCAGTTTCGGCCAAGATTGAACCCAATTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| ppa018586m | Leucine-rich repeat protein kinase family protein (best arabidopsis hit) | AVFISLKGAWTNLPPSWNDKSNDPCGMNWEGVTCNNSRVTALGLSAMDLKGQIEGDIGGLSELRSLDLSFNKGLTGSLSPRLGDLSKLNILILAGCGFSGNIPEELGNLGELTFLALNTNKFTGQIPPSLGKLSKLNWLDLVDNQLTGTLPISTPLTSGLDNLLKAEHFHFSKNNLSGTIHPKLFSSKMKLIHILFDGNQFIREIPSTIALVQTLEVLRLDRNALTGNVPSNISNLTHVNELNLAHNKLTGPLPDLTGMRSLHTVDLSNNSFDPSEAPLWFSNLPSITTIVLEFGALEGTVPEKMFGIKTLQQVKLKNNAFNDTLNLGDSISPQLQLVDLQHNQIPKITLGYKYKHTLILVENPFCTSGTAVTKFCQLPQQDTETYTTSSNCARITCPDNQKPSPQSCQCAYPFKGTLYFRAPPFRELPNVTMFHALETILWEILGLIPGSVSLENPFFDNHDYLQIQLALFPPTGMYFNRSEIMRIGLDLNYQNQKPPEGFGPYYFIPYPYTFPGGNKSSMSTGVIIGTSVSCVALVLGLVVVGIYAIRQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARCFSFDELKKCTNNFSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETILQNDGMNTNSTSASSSATEFAASKGAPKHPYNDGLPKKEVNDSTGAFYYSSGYAVSAKIEPN* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF08263 IPR013210
|
4-35 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
ISLKGAWTNLPPSWNDKSNDPCGMNWEGVTCN |
| HMMPanther: PTHR24420:SF476 | 5-933 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | SLKGAWTNLPPSWNDKSNDPCGMNWEGVTCNNSRVTALGLSAMDLKGQIEGDIGGLSELRSLDLSFNKGLTGSLSPRLGDLSKLNILILAGCGFSGNIPEELGNLGELTFLALNTNKFTGQIPPSLGKLSKLNWLDLVDNQLTGTLPISTPLTSGLDNLLKAEHFHFSKNNLSGTIHPKLFSSKMKLIHILFDGNQFIREIPSTIALVQTLEVLRLDRNALTGNVPSNISNLTHVNELNLAHNKLTGPLPDLTGMRSLHTVDLSNNSFDPSEAPLWFSNLPSITTIVLEFGALEGTVPEKMFGIKTLQQVKLKNNAFNDTLNLGDSISPQLQLVDLQHNQIPKITLGYKYKHTLILVENPFCTSGTAVTKFCQLPQQDTETYTTSSNCARITCPDNQKPSPQSCQCAYPFKGTLYFRAPPFRELPNVTMFHALETILWEILGLIPGSVSLENPFFDNHDYLQIQLALFPPTGMYFNRSEIMRIGLDLNYQNQKPPEGFGPYYFIPYPYTFPGGNKSSMSTGVIIGTSVSCVALVLGLVVVGIYAIRQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARCFSFDELKKCTNNFSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETILQNDGMNTNSTSASSSATEFAASKGAPKHPYNDGLPKKEVNDSTGAFYYSSGYAVSAKIEP |
| HMMPanther: PTHR24420 | 5-933 | FAMILY NOT NAMED,FAMILY NOT NAMED | SLKGAWTNLPPSWNDKSNDPCGMNWEGVTCNNSRVTALGLSAMDLKGQIEGDIGGLSELRSLDLSFNKGLTGSLSPRLGDLSKLNILILAGCGFSGNIPEELGNLGELTFLALNTNKFTGQIPPSLGKLSKLNWLDLVDNQLTGTLPISTPLTSGLDNLLKAEHFHFSKNNLSGTIHPKLFSSKMKLIHILFDGNQFIREIPSTIALVQTLEVLRLDRNALTGNVPSNISNLTHVNELNLAHNKLTGPLPDLTGMRSLHTVDLSNNSFDPSEAPLWFSNLPSITTIVLEFGALEGTVPEKMFGIKTLQQVKLKNNAFNDTLNLGDSISPQLQLVDLQHNQIPKITLGYKYKHTLILVENPFCTSGTAVTKFCQLPQQDTETYTTSSNCARITCPDNQKPSPQSCQCAYPFKGTLYFRAPPFRELPNVTMFHALETILWEILGLIPGSVSLENPFFDNHDYLQIQLALFPPTGMYFNRSEIMRIGLDLNYQNQKPPEGFGPYYFIPYPYTFPGGNKSSMSTGVIIGTSVSCVALVLGLVVVGIYAIRQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARCFSFDELKKCTNNFSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETILQNDGMNTNSTSASSSATEFAASKGAPKHPYNDGLPKKEVNDSTGAFYYSSGYAVSAKIEP |
| superfamily: SSF52058 | 10-409 | L domain-like,LRR | WTNLPPSWNDKSNDPCGMNWEGVTCNNSRVTALGLSAMDLKGQIEGDIGGLSELRSLDLSFNKGLTGSLSPRLGDLSKLNILILAGCGFSGNIPEELGNLGELTFLALNTNKFTGQIPPSLGKLSKLNWLDLVDNQLTGTLPISTPLTSGLDNLLKAEHFHFSKNNLSGTIHPKLFSSKMKLIHILFDGNQFIREIPSTIALVQTLEVLRLDRNALTGNVPSNISNLTHVNELNLAHNKLTGPLPDLTGMRSLHTVDLSNNSFDPSEAPLWFSNLPSITTIVLEFGALEGTVPEKMFGIKTLQQVKLKNNAFNDTLNLGDSISPQLQLVDLQHNQIPKITLGYKYKHTLILVENPFCTSGTAVTKFCQLPQQDTETYTTSSNCARITCPDNQKPSPQSCQ |
| Gene3D: G3DSA:3.80.10.10 | 12-213 | no description | NLPPSWNDKSNDPCGMNWEGVTCNNSRVTALGLSAMDLKGQIEGDIGGLSELRSLDLSFNKGLTGSLSPRLGDLSKLNILILAGCGFSGNIPEELGNLGELTFLALNTNKFTGQIPPSLGKLSKLNWLDLVDNQLTGTLPISTPLTSGLDNLLKAEHFHFSKNNLSGTIHPKLFSSKMKLIHILFDGNQFIREIPSTIALVQ |
| HMMPfam: PF00560 IPR001611
|
63-84 | LRR_1 Leucine-rich repeat
|
LRSLDLSFNKGLTGSLSPRLGD |
| Gene3D: G3DSA:3.80.10.10 | 214-348 | no description | TLEVLRLDRNALTGNVPSNISNLTHVNELNLAHNKLTGPLPDLTGMRSLHTVDLSNNSFDPSEAPLWFSNLPSITTIVLEFGALEGTVPEKMFGIKTLQQVKLKNNAFNDTLNLGDSISPQLQLVDLQHNQIPKI |
| Seg: seg | 498-517 | seg | PPEGFGPYYFIPYPYTFPGG |
| Seg: seg | 535-545 | seg | VALVLGLVVVG |
| superfamily: SSF56112 IPR011009
|
571-876 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SGKDSGGAPQLKGARCFSFDELKKCTNNFSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETILQND |
| Gene3D: G3DSA:3.30.200.20 | 581-660 | no description | LKGARCFSFDELKKCTNNFSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLG |
| HMMSmart: SM00219 IPR020635
|
599-869 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAI |
| HMMSmart: SM00220 IPR002290
|
599-873 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETIL |
| ProfileScan: PS50011 IPR000719
|
599-873 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSDSNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKAIETIL |
| HMMPfam: PF07714 IPR001245
|
603-868 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
NEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNVVGLLGFCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKA |
| PatternScan: PS00107 IPR017441
|
605-627 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGSGGYGKVYRGMLSDGQVVAIK |
| Gene3D: G3DSA:1.10.510.10 | 661-868 | no description | FCFEQGEQVLVYEFIPNGTLRESLSGRSGIHLDWQRRLRITLGSARGLAYLHELANPPIIHRDVKSANILLDEHLTAKVTDFGLSKLVADSGKGHVSSQVKGTMGYLDPEYYTTQQLTEKSDVYSFGVVMLELITARKPIEMGKYIVRQVQMMMDKNDEEHYGLRELMDRSIRNSGTLTGFGRFLELALQCVEESAADRPTMSELVKA |
| PatternScan: PS00108 IPR008271
|
719-731 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDVKSANILL |
| Seg: seg | 882-895 | seg | STSASSSATEFAAS |
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