PRGDB00172395 (ppa014995m)
| ppa014995m | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Prunus persica |
DNA Sequence
ATGGACAAAATTCTTTCATTCATTTCCATTGGAATTTATGTGTTCCTCATTTTCTGCAGAACCTCAACTGCAGCTGATACCTTGATTTTCAAACATGGCAGCTTTCAATTGGGTTTCTTAAATACTGGGGTTTACCGGCGTCTATTAGCATCAACTTCAGGAGATTACTGTGACAACGATGGCCTTTGTGGAGCCAATGGAATGTGTGACATTAGTAATTCACAAGTCTGCAGTTGTTTAAAAGGGTTCAAGCCCAAAAGACCAGAAAAATGGAACTTGGGAGAATATACAGAAGGTTGTGTGCGGCCTGAACTTTTGAAATGCCAAATTAAAGTTGGGTTTATGAAATATGCTGCAGTGAAATTGCCAGATATCACAAATTGTTGGGTCAATCAAAGTATGAACCTCATGGAATGCAGAGCAAGTTGCTTGAGCAACTGTTCTTGTATGGCTTACTCAAGCTCCGGTATCAAAGGAGAAGGCAGTGGCTGCACCATCTGGTTTGGTGATCTTATCAACATTAGAAAGCTTTTGGCTGGTGGGCAGGATCTGTATATTCGAACGCCTGCTTCGGAACTGAACGCGAATTGCCGAAAGACAAAGATTGCAGTGATAGTTGTATCCATTGCTTCCATTGTTTCTGGGATGCTCTTAGCTGTTTGTTGCATTTGCCGTAAGAGTTCGAAGTTCAAAGAGAAAATGGGAAAGCATGGAACAATGAGTCAGAACTATGGACAGAAAGAAGACCTGGAGGTACCATTATTTAGTCTGTCCACAATAGCCACTGCTACTGACAACTTTTCATTCAACAAGAAGCTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGTAGACTAGTAGATGGGCAAGAAATTGCGGTGAAGAGGCTCTCACAAAGTTCAGGGCAAGGATCAAACGAGTTCAAAACCGAAGTACGACTAATAGCCAAACTTCAGCACCGAAATCTCGTGAGGCTTCTAGGTTGTTGCATTGAGGGCGAAGAGAAGTTGCTGATTTATGAGCACATGCCCAACAAAAGCTTGGACTTCTACATTTTTGATCAAACTCAAAGTAGACTGTTGTATTGGTCAAAACGCTTCCACATTATCTGTGGGATTGCCAGGGGTCTTCTCTATCTGCATCAAGATTCAAGATTGAGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTTGACAAGGAGATGAACCCAAAAATCTCCGACTTCGGCTTAGCTAAAACTTTTGGAGGAGATCAGAATGAAGGAGTTACAAGAACTGTTGTTGGAACCTATGGTTATATGGCACCGGAATATGCCATTGATGGCCAATTCTCTGTAAAATCAGACGTTTTTAGCTTTGGCATTTTGTTGTTGGAGATAGTAAGTGGGAAGAGAAGTAGAGGATTTTATGATCCGGATGAACACCTTAACCTCATTGGACATGCATGGAGATTGTGGAAAGGAGGGAGGTCTCTAGAGTTGATTGATGAAAGCTTAAGCGACTCATGCGCTCTATCAGAAGTCTTGCACTGCATACACATTAGTCTTTTATGTGTGCAACAGCTTCCTGAAGACAGGCCAACCATGTCATCTGTGATTCTGATGTTAGGTGATGGGGGCGCCTTGCCTCAACCCAAAAGGCCAGGTTTCTTTGGTGGAAGATATTCATCTCAAGCAGATTCTTCGTCAAGTAAGAACGAAATATCTTCACCCTTTGACTCTACAATAACCGTGCTGGAGGCTCGATAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| ppa014995m | S-locus lectin protein kinase family protein (best arabidopsis hit) | MDKILSFISIGIYVFLIFCRTSTAADTLIFKHGSFQLGFLNTGVYRRLLASTSGDYCDNDGLCGANGMCDISNSQVCSCLKGFKPKRPEKWNLGEYTEGCVRPELLKCQIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINIRKLLAGGQDLYIRTPASELNANCRKTKIAVIVVSIASIVSGMLLAVCCICRKSSKFKEKMGKHGTMSQNYGQKEDLEVPLFSLSTIATATDNFSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILMLGDGGALPQPKRPGFFGGRYSSQADSSSSKNEISSPFDSTITVLEAR* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00954 IPR000858
|
27-86 | S_locus_glycop S-locus glycoprotein
|
TLIFKHGSFQLGFLNTGVYRRLLASTSGDYCDNDGLCGANGMCDISNSQVCSCLKGFKPK |
| ProfileScan: PS50026 IPR000742
|
53-89 | EGF_3 Epidermal growth factor-like domain
|
SGDYCDNDGLCGANGMCDISNSQVCSCLKGFKPKRPE |
| HMMPanther: PTHR24420:SF703 | 57-572 | SUBFAMILY NOT NAMED | CDNDGLCGANGMCDISNSQVCSCLKGFKPKRPEKWNLGEYTEGCVRPELLKCQIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINIRKLLAGGQDLYIRTPASELNANCRKTKIAVIVVSIASIVSGMLLAVCCICRKSSKFKEKMGKHGTMSQNYGQKEDLEVPLFSLSTIATATDNFSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILMLGDGGALPQPKRPGFFGGRYSSQADSSSSKNEISS |
| HMMPanther: PTHR24420 | 57-572 | FAMILY NOT NAMED,FAMILY NOT NAMED | CDNDGLCGANGMCDISNSQVCSCLKGFKPKRPEKWNLGEYTEGCVRPELLKCQIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINIRKLLAGGQDLYIRTPASELNANCRKTKIAVIVVSIASIVSGMLLAVCCICRKSSKFKEKMGKHGTMSQNYGQKEDLEVPLFSLSTIATATDNFSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILMLGDGGALPQPKRPGFFGGRYSSQADSSSSKNEISS |
| HMMPfam: PF08276 IPR013227
|
108-174 | PAN_2 PAN-2 domain
|
CQIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINI |
| ProfileScan: PS50948 IPR003609
|
108-190 | PAN Apple-like
|
CQIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINIRKLLAGGQDLYIRTPA |
| HMMSmart: SM00473 IPR003609
|
109-188 | divergent subfamily of APPLE domains Apple-like
|
QIKVGFMKYAAVKLPDITNCWVNQSMNLMECRASCLSNCSCMAYSSSGIKGEGSGCTIWFGDLINIRKLLAGGQDLYIRT |
| Seg: seg | 202-214 | seg | IAVIVVSIASIVS |
| superfamily: SSF56112 IPR011009
|
237-538 | Protein kinase-like (PK-like) Protein kinase-like domain
|
HGTMSQNYGQKEDLEVPLFSLSTIATATDNFSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILML |
| Gene3D: G3DSA:3.30.200.20 | 251-328 | no description | EVPLFSLSTIATATDNFSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLG |
| ProfileScan: PS50011 IPR000719
|
267-552 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILMLGDGGALPQPKRPGF |
| HMMSmart: SM00220 IPR002290
|
267-538 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILML |
| HMMSmart: SM00219 IPR020635
|
267-538 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVILML |
| HMMPfam: PF07714 IPR001245
|
268-536 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
SFNKKLGEGGFGPVYKGRLVDGQEIAVKRLSQSSGQGSNEFKTEVRLIAKLQHRNLVRLLGCCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSVIL |
| Gene3D: G3DSA:1.10.510.10 | 329-534 | no description | CCIEGEEKLLIYEHMPNKSLDFYIFDQTQSRLLYWSKRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGLAKTFGGDQNEGVTRTVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIVSGKRSRGFYDPDEHLNLIGHAWRLWKGGRSLELIDESLSDSCALSEVLHCIHISLLCVQQLPEDRPTMSSV |
| PatternScan: PS00108 IPR008271
|
388-400 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKASNVLL |
| Seg: seg | 493-504 | seg | SLELIDESLSDS |
| HMMPfam: PF11883 IPR021820
|
543-584 | DUF3403 S-locus receptor kinase, C-terminal
|
ALPQPKRPGFFGGRYSSQADSSSSKNEISSPFDSTITVLEAR |
List of Contributions
There has not been any contribution yet.
