PRGDB00172551 (ppb019715m)
| ppb019715m | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Prunus persica |
DNA Sequence
ATGCCAAATGTTGACACATTTGATGAACTGGTAGATCTTTTTGCAGTACAAAGACGTCGTTTTGTATTTTTTGATGACGTTGTATTGTTTAACAACGACGGTTATTTAGCGTCGTGGTTTATGAGGGAAAAGATGACGCTTCCTGAATTTCTTGGCAAATTTCGAGTTCGTAAGCTTCTCAATCTTTCTCGTAATGATTTCGAGGGTGAAATGCCTAGAGAAGGGATTTTTACAAATGCAAGCGGTGTCTCCATTTTCGGAAATGTAAAGCCCCATTCATCTCAAAGACCATTTTCCCAAAGAGTAGTCATCGTTATAGCTTGTGCATTTGCATTCATAATTGCTATGTCATGTTCCATTGCTATATATTCAAAGGTGAAAATGTCACGAGGAAGTTTTGGTTCTCTTTACAAAGGAGTAATCCCTAGAGATGGAACAATAGTTTCTGTTAAGGTATTGAACCTTCAACAACAAGGATCTTTCAAGAGTTTCATTGATGAACGCAAAGCTTTAAGAAGTATAAGGCATCGTAATCTTCTAAAGATCCTAACTGCCTGCTCAGGCATCGATAATCTGGGTAATGAGTTCAGAAGTCTAGTCTTCAAGTACATGGAAAATGGAAGTCTAGACTCATGGTTGTATCCAAGAGATGAGGAGCAATGGAAAATTAAGACCTTGGGTGTTGTCCAAAGAATGAACATTGCTATTGATGTTGCTTCTGCTTTAGATTATCTCCATCACCATTGTGAAGGGGCCATTGTTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTTGATGAGGATATGGTAGCCCATGTTGGTGACTTTGGTGTAGCAAGGTTCCTTTTGGAAACATCAAATGATCCCTCCCAGAGTCAAACAATATGTCAACTGGGTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| ppb019715m | Leucine-rich repeat protein kinase family protein (best arabidopsis hit) | MPNVDTFDELVDLFAVQRRRFVFFDDVVLFNNDGYLASWFMREKMTLPEFLGKFRVRKLLNLSRNDFEGEMPREGIFTNASGVSIFGNVKPHSSQRPFSQRVVIVIACAFAFIIAMSCSIAIYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQSQTICQLG* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 18-28 | seg | RRRFVFFDDVV |
| HMMPanther: PTHR24420:SF474 | 46-292 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | TLPEFLGKFRVRKLLNLSRNDFEGEMPREGIFTNASGVSIFGNVKPHSSQRPFSQRVVIVIACAFAFIIAMSCSIAIYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQS |
| HMMPanther: PTHR24420 | 46-292 | FAMILY NOT NAMED,FAMILY NOT NAMED | TLPEFLGKFRVRKLLNLSRNDFEGEMPREGIFTNASGVSIFGNVKPHSSQRPFSQRVVIVIACAFAFIIAMSCSIAIYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQS |
| superfamily: SSF56112 IPR011009
|
92-285 | Protein kinase-like (PK-like) Protein kinase-like domain
|
HSSQRPFSQRVVIVIACAFAFIIAMSCSIAIYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLET |
| Seg: seg | 102-115 | seg | VVIVIACAFAFIIA |
| ProfileScan: PS50011 IPR000719
|
122-299 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
IYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQSQTICQLG |
| HMMSmart: SM00220 IPR002290
|
122-295 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
IYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQSQTI |
| HMMSmart: SM00219 IPR020635
|
122-298 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
IYSKVKMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDPSQSQTICQL |
| HMMPfam: PF00069 IPR000719
|
127-289 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
KMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIRHRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSNDP |
| Gene3D: G3DSA:3.30.200.20 | 127-175 | no description | KMSRGSFGSLYKGVIPRDGTIVSVKVLNLQQQGSFKSFIDERKALRSIR |
| Gene3D: G3DSA:1.10.510.10 | 176-287 | no description | HRNLLKILTACSGIDNLGNEFRSLVFKYMENGSLDSWLYPRDEEQWKIKTLGVVQRMNIAIDVASALDYLHHHCEGAIVHCDLKPSNVLLDEDMVAHVGDFGVARFLLETSN |
| PatternScan: PS00108 IPR008271
|
253-265 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IVHCDLKPSNVLL |
List of Contributions
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