Data Overview

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Reference genes per species

Species Reference R-Genes Putative R-Genes (Phytozome) Putative R-Genes (UniGene) Putative R-Genes (NCBI) Contributed R-Genes Total
(Populus tomentosa x P. bolleana) x P. tomentosa 0 0 0 2 0 2
(Populus tomentosa x P. bolleana) x P. tomentosa var. truncata 0 0 0 4 0 4
Aegilops peregrina 0 0 0 1 0 1
Aegilops tauschii 1 0 0 5 0 6
Aquilegia coerulea 0 1691 0 0 0 1691
Aquilegia formosa x Aquilegia pubescens 0 0 172 0 0 172
Arabidopsis arenosa 0 0 0 4 0 4
Arabidopsis halleri 0 0 0 1 0 1
Arabidopsis lyrata 0 1268 0 300 0 1568
Arabidopsis lyrata subsp. lyrata 0 725 131 106 0 962
Arabidopsis lyrata subsp. petraea 0 0 0 100 0 100
Arabidopsis thaliana 25 1468 1356 3294 1 6144
Arachis diogoi 0 0 0 2 0 2
Arachis hypogaea 0 0 96 43 0 139
Areca catechu 0 5821 0 5 0 5826
Artemisia annua 0 0 958 0 0 958
Atalantia ceylanica 0 0 0 1 0 1
Avena sativa 0 0 0 2 0 2
Begonia hybrid cultivar 0 0 0 1 0 1
Beta procumbens 0 0 0 0 0 0
Beta vulgaris 1 0 0 17 0 18
Brachypodium distachyon 0 482 21 156 0 659
Brassica napus 0 0 329 72 0 401
Brassica nigra 0 0 0 1 0 1
Brassica oleracea 0 0 299 30 0 329
Brassica rapa 0 1856 7 24 0 1887
Brassica rapa subsp. oleifera 0 0 0 10 0 10
Brassica rapa subsp. pekinensis 0 0 0 93 0 93
Camelina sativa 0 0 0 2 0 2
Capsella grandiflora 0 0 108 5 0 113
Capsella rubella 0 1378 0 1 0 1379
Capsicum annuum 2 0 153 69 8 232
Capsicum chacoense 1 0 0 1 0 2
Capsicum chinense 0 0 0 1 0 1
Carex blanda 0 0 0 1 0 1
Carica papaya 0 0 17 0 0 17
Chlamydomonas reinhardtii 0 174 19 0 0 193
Cicer arietinum 0 0 0 25 0 25
Citrus amblycarpa 0 0 0 2 0 2
Citrus aurantiifolia 0 0 0 2 0 2
Citrus aurantium 0 0 0 3 0 3
Citrus clementina 0 2505 143 0 0 2648
Citrus grandis x Poncirus trifoliata 0 0 0 22 0 22
Citrus halimii 0 0 0 2 0 2
Citrus hanaju 0 0 0 2 0 2
Citrus ichangensis 0 0 0 1 0 1
Citrus limettioides 0 0 0 1 0 1
Citrus limon 0 0 0 1 0 1
Citrus longispina 0 0 0 2 0 2
Citrus maxima 0 0 0 4 0 4
Citrus medica 0 0 0 5 0 5
Citrus nippokoreana 0 0 0 2 0 2
Citrus nobilis 0 0 0 1 0 1
Citrus reticulata 0 0 0 3 0 3
Citrus sinensis 0 2980 249 1 0 3230
Citrus unshiu 0 0 0 1 0 1
Citrus webberi 0 0 0 2 0 2
Coffea arabica 0 0 0 15 0 15
Coffea canephora 0 0 80 7 0 87
Cucumis melo 4 0 0 5 374 383
Cucumis melo subsp. melo 0 0 0 3 0 3
Cucumis sativus 0 0 131 1 0 132
Cucumis x hytivus 0 1463 261 17 0 1741
Cucurbita ficifolia 0 0 0 1 0 1
Curcuma angustifolia 0 0 0 5 0 5
Curcuma aromatica 0 0 0 9 0 9
Curcuma zedoaria 0 0 0 7 1 8
Daucus carota 0 0 0 1 0 1
Dimocarpus longan 0 0 64 31 0 95
Elaeis oleifera 0 0 0 2 0 2
Eleusine coracana 0 0 0 30 0 30
Eucalyptus grandis 0 4326 0 0 0 4326
Eutrema halophilum 0 1258 26 4 0 1288
Festuca pratensis 0 0 157 0 0 157
Fortunella margarita 0 0 0 1 0 1
Fragaria chiloensis 0 0 0 2 0 2
Fragaria vesca 0 0 0 1 0 1
Fragaria x ananassa 0 0 0 13 0 13
Glycine max 3 2997 1855 310 0 5165
Gossypium arboreum 0 1422 0 3 0 1425
Gossypium barbadense 0 0 0 19 0 19
Gossypium hirsutum 0 0 428 1 0 429
Gossypium raimondii 0 0 51 0 0 51
Helianthus annuus 1 0 192 2 0 195
Hevea brasiliensis 0 0 7 32 0 39
Hordeum vulgare 5 0 1211 46 0 1262
Hordeum vulgare subsp. spontaneum 0 0 0 4 0 4
Hordeum vulgare subsp. vulgare 3 0 0 27 0 30
Humulus lupulus 0 0 0 91 0 91
Ipomoea batatas 0 0 0 67 0 67
Ipomoea trifida 0 0 0 8 0 8
Lactuca saligna 0 0 0 3 0 3
Lactuca sativa 1 0 2281 17 0 2299
Lactuca serriola 0 0 0 51 0 51
Linum usitatissimum 3 1941 0 3 0 1947
Lolium perenne 0 0 0 7 0 7
Lotus japonicus 0 0 467 0 0 467
Malus baccata 0 0 0 10 0 10
Malus floribunda 0 0 0 105 0 105
Malus prunifolia 0 0 0 32 0 32
Malus x domestica 0 4377 401 224 0 5002
Mangifera indica 0 0 0 17 0 17
Manihot esculenta 0 0 8 0 0 8
Medicago sativa 0 0 0 2 0 2
Medicago truncatula 0 2084 803 313 1 3201
Microcitrus australasica 0 0 0 1 0 1
Mimulus guttatus 0 0 0 0 0 0
Musa AAB Group 0 0 0 14 0 14
Musa ABB Group 0 0 0 14 0 14
Musa acuminata 0 0 0 37 0 37
Musa acuminata AAA Group 0 0 0 14 0 14
Musa acuminata subsp. burmannicoides 0 0 0 3 0 3
Musa acuminata subsp. errans 0 0 0 6 0 6
Musa acuminata subsp. malaccensis 0 0 0 17 0 17
Musa acuminata subsp. microcarpa 0 0 0 6 0 6
Musa acuminata subsp. siamea 0 0 0 2 0 2
Musa balbisiana 0 0 0 34 0 34
Musa balbisiana x Musa textilis 0 0 0 6 0 6
Musa banksii 0 0 0 3 0 3
Musa ornata 0 0 0 3 0 3
Musa schizocarpa 0 0 0 9 0 9
Musa textilis 0 0 0 10 0 10
Musa textilis x Musa ABB Group 0 0 0 3 0 3
Musa velutina 0 0 0 3 0 3
Neslia paniculata 0 0 24 1 0 25
Nicotiana benthamiana 2 0 0 0 0 2
Nicotiana debneyi 0 0 0 2 0 2
Nicotiana glutinosa 1 0 0 0 0 1
Nicotiana plumbaginifolia 0 0 0 0 0 0
Nicotiana tabacum 1 0 362 42 0 405
Oryza barthii 0 1174 0 2 0 1176
Oryza brachyantha 0 0 0 4 0 4
Oryza coarctata 0 0 0 3 0 3
Oryza latifolia 0 0 0 1 0 1
Oryza longistaminata 0 0 0 4 0 4
Oryza meridionalis 0 0 0 2 0 2
Oryza meyeriana 0 0 0 6 0 6
Oryza minuta 0 0 0 1 1 2
Oryza officinalis 0 0 0 6 1 7
Oryza ridleyi 0 0 0 4 0 4
Oryza rufipogon 0 0 0 38 0 38
Oryza sativa 4 2677 102 18 0 2801
Oryza sativa Indica Group 7 0 0 87 0 94
Oryza sativa Japonica Group 9 0 1645 945 2 2601
Panicum virgatum 0 3860 20 0 0 3880
Pennisetum glaucum 0 1268 0 1 0 1269
Phaseolus vulgaris 1 1977 147 97 3 2225
Phyllostachys edulis 0 0 0 4 0 4
Physcomitrella patens 0 823 339 4 0 1166
Physcomitrella patens subsp. patens 0 0 30 24 0 54
Picea glauca 0 0 965 0 0 965
Picea sitchensis 0 0 390 0 0 390
Pinus radiata 0 0 0 1 0 1
Pinus strobus 0 0 0 4 0 4
Pinus sylvestris 0 0 0 1 0 1
Pinus taeda 0 0 364 3 0 367
Pisum sativum 0 0 0 18 0 18
Poa pratensis 0 0 264 2 0 266
Poncirus trifoliata 0 0 0 1 0 1
Populus alba 0 0 0 1 0 1
Populus balsamifera 0 0 0 1 0 1
Populus deltoides 0 0 0 5 0 5
Populus tremula 0 0 0 66 0 66
Populus tremula x Populus tremuloides 0 0 90 0 0 90
Populus trichocarpa 0 2897 455 804 0 4156
[[Species:|]] 0 [[List:Genes?organism=&type=Putative R-Genes, predicted from Pythozome|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Contributed R-Genes|]] [[List:Genes?organism=&type=Genes|]]
Prunus dulcis 0 0 0 1 0 1
Prunus persica 0 1734 69 1 0 1804
Pyrus betulifolia 0 0 0 4 0 4
Pyrus communis 0 0 0 29 0 29
Pyrus hybrid cultivar 0 0 0 11 0 11
Pyrus pyrifolia 0 0 0 30 0 30
Pyrus sinkiangensis 0 0 0 18 0 18
Pyrus ussuriensis 0 0 0 5 0 5
Pyrus x bretschneideri 0 0 0 16 0 16
Raphanus raphanistrum 0 0 301 0 0 301
Raphanus sativus 0 0 270 2 0 272
Ricinus communis 0 1588 179 100 0 1867
Rosa roxburghii 0 0 0 8 0 8
Saccharum hybrid cultivar 0 0 458 1 0 459
Saccharum officinarum 0 0 235 14 0 250
Selaginella moellendorffii 0 658 345 12 0 1015
Sesamum indicum 0 0 0 29 0 29
Sesbania rostrata 0 0 0 1 0 1
Setaria italica 0 2015 0 1 0 2016
Solanum acaule 1 0 0 0 0 1
Solanum aethiopicum 0 0 0 2 0 2
Solanum albicans 0 0 0 5 0 5
Solanum arnezii x Solanum hondelmannii 0 0 0 2 0 2
Solanum berthaultii 0 0 0 14 0 14
Solanum bulbocastanum 2 0 0 11 1 14
Solanum chacoense 0 0 0 6 0 6
Solanum chilense 0 0 0 14 0 14
Solanum chmielewskii 0 0 0 3 0 3
Solanum demissum 1 0 0 92 3 96
Solanum ehrenbergii 0 0 0 2 0 2
Solanum fernandezianum 0 0 0 4 0 4
Solanum habrochaites 2 0 0 14 0 16
Solanum hondelmannii 0 0 0 1 0 1
Solanum hougasii 0 0 0 1 0 1
Solanum huancabambense 0 0 0 3 0 3
Solanum leptophyes x Solanum sparsipilum 0 0 0 5 0 5
Solanum lycopersicoides 0 0 0 2 0 2
Solanum lycopersicum 12 0 465 78 1103 1658
Solanum lycopersicum var. cerasiforme 1 0 0 2 0 3
Solanum melongena 0 0 184 50 0 234
Solanum neorickii 0 0 0 2 0 2
Solanum nigrum 0 0 0 1 0 1
Solanum ochranthum 0 0 0 0 0 0
[[Species:|]] 0 [[List:Genes?organism=&type=Putative R-Genes, predicted from Pythozome|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Contributed R-Genes|]] [[List:Genes?organism=&type=Genes|]]
Solanum pennellii 0 0 0 0 0 0
Solanum peruvianum 0 0 0 20 0 20
Solanum pimpinellifolium 5 0 0 12 355 372
Solanum sogarandinum 0 0 0 0 0 0
Solanum spegazzinii 0 0 0 0 0 0
Solanum stenotomum 0 0 0 1 0 1
Solanum sucrense 0 0 0 26 0 26
Solanum tarijense 0 0 0 0 0 0
Solanum torvum 0 0 0 2 0 2
Solanum tuberosum 4 0 316 77 1332 1729
Solanum tuberosum subsp. andigena 1 0 0 1 0 2
Solanum vernei 0 0 0 6 0 6
Solanum x edinense 0 0 0 5 0 5
Sorghum bicolor 0 1497 422 99 0 2018
Theobroma cacao 0 0 144 9 0 153
Triticum aestivum 5 0 1790 66 1 1862
Triticum turgidum 0 0 0 1 0 1
Triticum turgidum subsp. dicoccoides 0 0 9 1 0 10
Vicia faba 0 0 0 44 0 44
Vigna unguiculata 0 0 248 3 0 251
Vigna vexillata 0 0 0 1 0 1
Vitis aestivalis 0 1839 92 3 0 1934
Vitis hybrid cultivar 0 0 0 3 0 3
Vitis labrusca 0 0 0 1 0 1
Vitis pseudoreticulata 0 0 0 1 0 1
Vitis vinifera 0 1566 622 253 0 2441
Volvox carteri 0 92 15 0 0 107
Zea mays 3 2500 856 23 0 3382
Zingiber officinale 0 0 0 3 0 3
[[Species:|]] 0 [[List:Genes?organism=&type=Putative R-Genes, predicted from Pythozome|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Putative R-Genes, predicted from NCBI UniGene|]] [[List:Genes?organism=&type=Contributed R-Genes|]] [[List:Genes?organism=&type=Genes|]]
Zizania latifolia 0 0 0 7 0 7
Total - (241) 112 68509 24919 9639 3194 106373
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