PRGDB00000030 (Bs2)

Bs2
Gene Type	Reference_R-Genes,_manually_curated
GenBank	6456754 (AF202179)
Gene Class	CNL
Domain Type	NBS, LRR, Others
Gene Species	Capsicum chacoense
	Comment?

Capsicum chacoense disease resistance protein BS2 (BS2) mRNA, complete cds.

DNA Sequence

ATGGCTCATGCAAGTGTGGCTTCTCTTATGAGAACAATAGAATCTCTCTTGACATTCAATTCGCCGATGCAATCTCTATCCTGTGATCACAGAGAAGAACTTTGCGCTCTTCGTGAAAAAGTTAGTTCCCTGGAAGTATTTGTCAAGAACTTTGAGAAAAACAATGTTTTTGGGGAAATGACGGATTTTGAAGTAGAGGTAAGAGAAGTTGCAAGTGCTGCTGAATACACAATTCAACTGAGACTAACAGGAACTGTACTGGGAGAAAATAAAAGCCAGAAAAAAAAGGCGCGTCGAAGGTTTCGTCAAAGCCTGCAACAAGTAGCAGAGGACATGGATCATATCTGGAAAGAGTCGACAAAGATCCAAGATAAAGGAAAACAAGTATCAAAGGAATCATTGGTTCATGATTTTTCAAGTTCAACAAACGATATTTTGAAGGTTAAGAACAATATGGTTGGACGTGATGATCAAAGGAAACAGTTGTTAGAAGATCTGACTAGAAGCTACTCTGGGGAACCCAAAGTCATCCCGATTGTCGGGATGGGAGGCATAGGTAAAACAACCTTAGCAAAAGAAGTTTACAATGATGAATCAATTCTATGCCGTTTTGATGTTCATGCCTGGGCTACCATATCTCAACAGCACAACAAAAAGGAAATTTTGCTGGGCCTTCTGCATTCCACAATCAAAATGGATGACAGGGTTAAGATGATTGGTGAAGCAGAGCTAGCAGACATGTTACAGAAAAGTTTAAAGAGAAAGAGGTACTTAATTGTCTTGGATGATATCTGGAGTTGTGAAGTGTGGGATGGCGTGAGACGATGCTTTCCAACTGAAGACAATGCAGGGAGTCGAATACTGTTGACTACCCGTAATGATGAAGTAGCTTGTTATGCTGGTGTAGAGAATTTTTCTTTGCGGATGAGCTTCATGGATCAAGATGAGAGTTGGAGTCTTTTCAAAAGTGCAGCATTTTCAAGTGAAGCATTACCATATGAGTTCGAGACTGTTGGAAAGCAAATCGCAGATGAATGTCACGGGTTACCACTAACTATTGTCGTGGTTGCAGGGCTTCTCAAATCTAAAAGGACAATAGAAGATTGGAAAACTGTTGCTAAAGATGTCAAGTCATTCGTCACAAATGATCCTGATGAACGATGTTCACGTGTGCTTGGGTTGAGTTACGATCACTTGACAAGCGATCTAAAAACATGTCTTCTGCATTTCGGAATTTTTCCAGAAGACAGTGATATTCCAGTGAAGAATTTGATGAGATCATGGATGGCTGAGGGGTTCCTGAAGTTGGAAAATGATTTGGAAGGAGAGGTTGAGAAGTGTTTGCAAGAGCTTGTCGATAGATGTCTAGTCCTCGTCAGCAAGAGAAGTCGAGATGGAACAAAAATTAGATCATGTAAGGTTCATGATCTAATATATGACCTGTGCGTGAGAGAAGTTCAAAGGGAGAACATTTTTATCATGAACGACATTGTTCTTGACGTATCATATCCAGAATGTTCATATCTCTGTATGTATAAAATGCAGCCCTTTAAGCGCGTGACTGGTGATGAAATTAATTATTGTCCCTATGGTCTTTATAGGGCTCTTCTTACCCCTGTAAATCGTCAGTTGAGAGATCATGACAACAACAATCTTTTGAAACGAACCCATTCTGTTTTCTCTTTTCATCTTGAGCCTTTATATTATGTTCTCAAATCAGAGGTTGTTCATTTCAAATTACTCAAAGTCTTGGAGCTGAGACACAGACAGATTGATGGTTTCCCTCGAGAGATACTAAGCCTCATCTGGTTGAGGTACCTATCATTGTTCAGCTATGGGAATTTCGATGTACCTCCAGAAATTTGCAGGTTATGGAATCTGCAGACATTCATTGTTCAACGGTTTCGATCAGATATAATAATTTTTGCTGAGGAAATTTGGGAACTAATGCAATTAAGGCATCTTAAACTGCCCAGATTTTATTTGCCAGATTGCCCAAGTGGATCTGTTGACAAAGGAAGGCACTTGGATTTTTCAAACTTACAAACTATTTCTTACTTGTCTCCACGTTGTTGCACGAAGGAGGTTATTATGGGGATTCAGAATGTCAAAAAATTAGGAATCAGTGGAAATAAGGATGACTATAAAAGTTTTCGGGACTCTGGGCTTCCCAACAATCTTGTCTATCTGCAGCAACTTGAAATATTGAGTCTTATATCTGTTGATTATAGCCTTTTGCCAGTGATCATTTCAAGTGCAAAAGCTTTTCCAGCAACGCTCAAGAAGTTGAAGTTGGAAAGAACTTATCTAAGCTGGTCATACTTGGACATCATAGCTGAGTTGCCTAACCTTGAGGTGCTGAAGCTGATGGATGACGCTTGTTGTGGTGAAGAATGGCATCCAATTGTTATGGGATTTAATCGATTGAAGCTTTTGCTAATTAAATATAGTTTTCTCAAGTTCTGGAAAGCCACAAATGACAATTTTCCTGTCCTTGAGCGCCTCATGATTAGAAGTTGCAAAAATTTGAAAGAGATACCCATTGAGTTTGCAGATATACACACACTACAGCTGATTGAGTTAAGAGAGTGTCCTCCCAAACTTGGGGAATCTGCTGCACGAATTCAGAAAGAACAAGAAGACCTCGGAAACAACCCTGTGGATGTTCGTATCTCAAATCCATTGAAGGAGAGTGATTCTGATTCAGAAGAACATTAG

Protein sequences

Name	Description	Sequence
disease resistance protein BS2	disease resistance protein BS2 [Capsicum chacoense].	MAHASVASLMRTIESLLTFNSPMQSLSCDHREELCALREKVSSLEVFVKNFEKNNVFGEMTDFEVEVREVASAAEYTIQLRLTGTVLGENKSQKKKARRRFRQSLQQVAEDMDHIWKESTKIQDKGKQVSKESLVHDFSSSTNDILKVKNNMVGRDDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTRNDEVACYAGVENFSLRMSFMDQDESWSLFKSAAFSSEALPYEFETVGKQIADECHGLPLTIVVVAGLLKSKRTIEDWKTVAKDVKSFVTNDPDERCSRVLGLSYDHLTSDLKTCLLHFGIFPEDSDIPVKNLMRSWMAEGFLKLENDLEGEVEKCLQELVDRCLVLVSKRSRDGTKIRSCKVHDLIYDLCVREVQRENIFIMNDIVLDVSYPECSYLCMYKMQPFKRVTGDEINYCPYGLYRALLTPVNRQLRDHDNNNLLKRTHSVFSFHLEPLYYVLKSEVVHFKLLKVLELRHRQIDGFPREILSLIWLRYLSLFSYGNFDVPPEICRLWNLQTFIVQRFRSDIIIFAEEIWELMQLRHLKLPRFYLPDCPSGSVDKGRHLDFSNLQTISYLSPRCCTKEVIMGIQNVKKLGISGNKDDYKSFRDSGLPNNLVYLQQLEILSLISVDYSLLPVIISSAKAFPATLKKLKLERTYLSWSYLDIIAELPNLEVLKLMDDACCGEEWHPIVMGFNRLKLLLIKYSFLKFWKATNDNFPVLERLMIRSCKNLKEIPIEFADIHTLQLIELRECPPKLGESAARIQKEQEDLGNNPVDVRISNPLKESDSDSEEH

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR11017:SF125	2-491	PTHR11017:SF125,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS)	AHASVASLMRTIESLLTFNSPMQSLSCDHREELCALREKVSSLEVFVKNFEKNNVFGEMTDFEVEVREVASAAEYTIQLRLTGTVLGENKSQKKKARRRFRQSLQQVAEDMDHIWKESTKIQDKGKQVSKESLVHDFSSSTNDILKVKNNMVGRDDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTRNDEVACYAGVENFSLRMSFMDQDESWSLFKSAAFSSEALPYEFETVGKQIADECHGLPLTIVVVAGLLKSKRTIEDWKTVAKDVKSFVTNDPDERCSRVLGLSYDHLTSDLKTCLLHFGIFPEDSDIPVKNLMRSWMAEGFLKLENDLEGEVEKCLQELVDRCLVLVSKRSRDGTKIRSCKVHDLIYDLCVREVQRENI
HMMPanther: PTHR11017	2-491	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	AHASVASLMRTIESLLTFNSPMQSLSCDHREELCALREKVSSLEVFVKNFEKNNVFGEMTDFEVEVREVASAAEYTIQLRLTGTVLGENKSQKKKARRRFRQSLQQVAEDMDHIWKESTKIQDKGKQVSKESLVHDFSSSTNDILKVKNNMVGRDDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTRNDEVACYAGVENFSLRMSFMDQDESWSLFKSAAFSSEALPYEFETVGKQIADECHGLPLTIVVVAGLLKSKRTIEDWKTVAKDVKSFVTNDPDERCSRVLGLSYDHLTSDLKTCLLHFGIFPEDSDIPVKNLMRSWMAEGFLKLENDLEGEVEKCLQELVDRCLVLVSKRSRDGTKIRSCKVHDLIYDLCVREVQRENI
superfamily: SSF52540	135-383	SSF52540	VHDFSSSTNDILKVKNNMVGRDDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTRNDEVACYAGVENFSLRMSFMDQDESWSLFKSAAFSSEALPYEFETVGKQIADECHGLPLTIVVVAGLLKSKRTIEDWKTVAKDVKSFVTND
Gene3D: G3DSA:3.40.50.300	155-292	G3DSA:3.40.50.300	RDDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTR
HMMPfam: PF00931 IPR002182	156-438	NB-ARC,NBS NB-ARC	DDQRKQLLEDLTRSYSGEPKVIPIVGMGGIGKTTLAKEVYNDESILCRFDVHAWATISQQHNKKEILLGLLHSTIKMDDRVKMIGEAELADMLQKSLKRKRYLIVLDDIWSCEVWDGVRRCFPTEDNAGSRILLTTRNDEVACYAGVENFSLRMSFMDQDESWSLFKSAAFSSEALPYEFETVGKQIADECHGLPLTIVVVAGLLKSKRTIEDWKTVAKDVKSFVTNDPDERCSRVLGLSYDHLTSDLKTCLLHFGIFPEDSDIPVKNLMRSWMAEGFLKLEN
FPrintScan: PR00364 IPR000767	176-191	DISEASERSIST Disease resistance protein	VIPIVGMGGIGKTTLA
FPrintScan: PR00364 IPR000767	251-265	DISEASERSIST Disease resistance protein	SLKRKRYLIVLDDIW
FPrintScan: PR00364 IPR000767	346-360	DISEASERSIST Disease resistance protein	CHGLPLTIVVVAGLL
superfamily: SSF52058	473-864	SSF52058,LRR	KVHDLIYDLCVREVQRENIFIMNDIVLDVSYPECSYLCMYKMQPFKRVTGDEINYCPYGLYRALLTPVNRQLRDHDNNNLLKRTHSVFSFHLEPLYYVLKSEVVHFKLLKVLELRHRQIDGFPREILSLIWLRYLSLFSYGNFDVPPEICRLWNLQTFIVQRFRSDIIIFAEEIWELMQLRHLKLPRFYLPDCPSGSVDKGRHLDFSNLQTISYLSPRCCTKEVIMGIQNVKKLGISGNKDDYKSFRDSGLPNNLVYLQQLEILSLISVDYSLLPVIISSAKAFPATLKKLKLERTYLSWSYLDIIAELPNLEVLKLMDDACCGEEWHPIVMGFNRLKLLLIKYSFLKFWKATNDNFPVLERLMIRSCKNLKEIPIEFADIHTLQLIELREC
Gene3D: G3DSA:3.80.10.10	567-865	G3DSA:3.80.10.10	LYYVLKSEVVHFKLLKVLELRHRQIDGFPREILSLIWLRYLSLFSYGNFDVPPEICRLWNLQTFIVQRFRSDIIIFAEEIWELMQLRHLKLPRFYLPDCPSGSVDKGRHLDFSNLQTISYLSPRCCTKEVIMGIQNVKKLGISGNKDDYKSFRDSGLPNNLVYLQQLEILSLISVDYSLLPVIISSAKAFPATLKKLKLERTYLSWSYLDIIAELPNLEVLKLMDDACCGEEWHPIVMGFNRLKLLLIKYSFLKFWKATNDNFPVLERLMIRSCKNLKEIPIEFADIHTLQLIELRECP
FPrintScan: PR00364 IPR000767	827-843	DISEASERSIST Disease resistance protein	DNFPVLERLMIRSCKNL

Diseases

Disease	Pathogen	Avirulence gene
Bacterial Spot	Xanthomonas campestris	PRGAV00000029
Leaf Spot	Xanthomonas campestris	PRGAV00000029

List of Contributions

There has not been any contribution yet.

Add a Contribution

Analyses

Blast

Blast matches against Reference R-Genes. Show