PRGDB00000049 (Rpi-blb2)
| Rpi-blb2 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 74040323 (DQ122125) |
| Gene Class | CNL |
| Domain Type | LRR, NBS, Others |
| Chromosome | 4 |
| Gene Species | Solanum bulbocastanum |
DNA Sequence
ATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTGGAGTCATTTTCTGCTCTTCGCAAGGATGCTGCCAATGTTCTGGATTTCCTAGAGAGATTAAAGAATGAAGAAGATCAAAAGGCTGTTGATGTGGATCTGATTGAAAGCCTGAAATTGAAGCTGACATTTATTTGTACATATGTCCAGCTTTCTTATTCCGATTTGGAGAAGTTTGAAGATATAATGACTAGAAAAAGACAAGAGGTTGAGAATCTGCTTCAACCAATTTTGGATGATGATGGCAAAGACGTCGGGTGTAAATATGTCCTTACTAGCCTCGCCGGTAATATGGATGACTGTATAAGCTTGTATCATCGTTCTAAATCAGATGCCACCATGATGGATGAGCAATTGGGCTTCCTCCTCTTGAATCTCTCTCATCTATCCAAGCATCGTGCTGAAAAGATGTTTCCTGGAGTGACTCAATATGAGGTTCTTCAGAATGTATGTGGCAACATAAGAGATTTCCATGGATTGATAGTGAATTGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTATCTCTGTTTCAACTGATGGCTGAGAGAGTAGGACGCTTCCTTTGGGAGGATCAGGCTGATGAAGACTCTCAACTCTCCGAGCTAGATGAGGATGATCAGAATGATAAAGACCCTCAACTCTTCAAGCTAGCACATCTACTCTTGAAGATTGTTCCAACTGAATTGGAGGTTATGCACATATGTTATAAAACTTTGAAAGCTTCAACTTCAACAGAAATTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCTCCGGACATTCTCAGAGAATATCTGATTCATCTACAAGAGCATATGATAACTGTTATTACCCCTAACACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTGATTATTCTTTCTGATATGCCGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCGTGTTGTAGCACTTACCAGGGAGGTATCAACTCTTGTACGCGACTTGGAAGAGAAATTAAGGATTAAAGAGAGTACTGACGAAACAAATTGTGCAACCCTAAAGTTTCTGGAAAATATTGAACTCCTTAAGGAAGATCTCAAACATGTTTATCTGAAAGTCCCGGATTCATCTCAATATTGCTTCCCCATGAGTGATGGACCTCTCTTCATGCATCTGCTACAGAGACACTTAGATGATTTGCTGGATTCCAATGCTTATTCAATTGCTTTGATAAAGGAACAAATTGGGCTGGTGAAAGAAGACTTGGAATTCATAAGATCTTTTTTCGCGAATATTGAGCAAGGATTGTATAAAGATCTCTGGGAACGTGTTCTAGATGTGGCATATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCAGAAAGAAGATGATGCTTATCAAAGAAGAGGTCTCTGATTTACATGAGAACATTTCCAAGAACAGAGGTCTCATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGCAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGGTGAGGAGACAAACTTGATACTTAGAAAGCTCACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCATTGGTATGCCGGGTTTAGGTAAAACTACTTTGGCGTACAAAGTATACAATGATAAATCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACGGTCGACCAAGTATATGACGAGAAGAAGTTGTTGGATAAAATTTTCAATCAAGTTAGTGACTCAAATTCAAAATTGAGTGAGAATATTGATGTTGCTGATAAACTACGGAAACAATTGTTTGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGATACTAATACATGGGATGAGCTAACAAGACCTTTTCCTGATGGTATGAAAGGAAGTAGAATTATTTTGACAACTCGAGAAAAGAAAGTTGCTTTGCATGGAAAGCTCTACACTGATCCTCTTAACCTTCGATTGCTAAGATCAGAAGAAAGTTGGGAGTTATTAGAGAAAAGGGCATTTGGAAACGAGAGTTGCCCTGATGAACTATTGGATGTTGGTAAAGAAATAGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGTGGATCTGATTGCTGGAATCATTGCTGGGAGGGAAAAGAAAAAGAGTGTGTGGCTTGAAGTTGTAAATAATTTGCATTCCTTTATTTTGAAGAATGAAGTGGAAGTGATGAAAGTTATAGAAATAAGTTATGACCACTTACCTGATCACCTGAAGCCATGCTTGCTGTACTTTGCAAGTGCGCCGAAGGACTGGGTAACGACAATCCATGAGTTGAAACTTATTTGGGGTTTTGAAGGATTTGTGGAAAAGACAGATATGAAGAGTCTGGAAGAAGTGGTGAAAATTTATTTGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATTACCCTACTTGCCAACTTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAAGTTGTGTGATCGGATAAGTTCAAGTGCTCCATCAGATTTGTTGCCACGTCAAATTAGCATTGATTATGATGATGATGAAGAGCACTTTGGGCTTAATTTTGTCCTGTTCGGTTCAAATAAGAAAAGGCATTCCGGTAAACACCTCTATTCTTTGACCATAAATGGAGATGAGCTGGACGACCATCTTTCTGATACATTTCATCTAAGACACTTGAGGCTTCTTAGAACCTTGCACCTGGAATCCTCTTTTATCATGGTTAAAGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGCATTGGGACAGAAGTTAAATCTCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAAATCTTGTTTGTGGATAACAAAGAATCAACCTTGATACTATTACCGAGAATTTGGGATCTTGTAAAGTTGCAAGTGCTGTTCACGACTGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATACTGATAGCAGAGGACACAAAGTTAGAGAACTTGACAGCATTAGGGGAACTCGTGCTTTCCTATTGGAAAGATACAGAGGATATTTTCAAAAGGCTTCCCAATCTTCAAGTGCTTCATTTCAAACTCAAGGAGTCATGGGATTATTCAACAGAGCAATATTGGTTCCCGAAATTGGATTTCCTAACTGAACTAGAAAAACTCACTGTAGATTTTGAAAGATCAAACACAAATGACAGTGGGTCCTCTGCAGCCATAAATCGGCCATGGGATTTTCACTTTCCTTCGAGTTTGAAAAGATTGCAATTGCATGAATTTCCTCTGACATCCGATTCACTATCAACAATAGCGAGACTGCTGAACCTTGAAGAGTTGTACCTTTATCGTACAATCATCCATGGGGAAGAATGGAACATGGGAGAAGAAGACACCTTTGAGAATCTCAAATGTTTGATGTTGAGTCAAGTGATTCTTTCCAAGTGGGAGGTTGGAGAGGAATCTTTTCCCACGCTTGAGAAATTAGAACTGTCGGACTGTCATAATCTTGAGGAGATTCCGTCTAGTTTTGGGGATATTTATTCCTTGAAAATTATCGAACTTGTAAGGAGCCCTCAACTTGAAAATTCCGCTCTCAAGATTAAGGAATATGCTGAAGATATGAGGGGAGGGGACGAGCTTCAGATCCTTGGCCAGAAGGATATCCCGTTATTTAAGTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| late blight resistance protein Rpi-blb2 | late blight resistance protein Rpi-blb2 [Solanum bulbocastanum]. | MEKRKDNEEANNSLESFSALRKDAANVLDFLERLKNEEDQKAVDVDLIESLKLKLTFICTYVQLSYSDLEKFEDIMTRKRQEVENLLQPILDDDGKDVGCKYVLTSLAGNMDDCISLYHRSKSDATMMDEQLGFLLLNLSHLSKHRAEKMFPGVTQYEVLQNVCGNIRDFHGLIVNCCIKHEMVENVLSLFQLMAERVGRFLWEDQADEDSQLSELDEDDQNDKDPQLFKLAHLLLKIVPTELEVMHICYKTLKASTSTEIGRFIKKLLETSPDILREYLIHLQEHMITVITPNTSGARNIHVMMEFLLIILSDMPPKDFIHHDKLFDLLARVVALTREVSTLVRDLEEKLRIKESTDETNCATLKFLENIELLKEDLKHVYLKVPDSSQYCFPMSDGPLFMHLLQRHLDDLLDSNAYSIALIKEQIGLVKEDLEFIRSFFANIEQGLYKDLWERVLDVAYEAKDVIDSIIVRDNGLLHLIFSLPITRKKMMLIKEEVSDLHENISKNRGLIVVNSPKKPVESKSLTTDKIIVGFGEETNLILRKLTSGPADLDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKKVALHGKLYTDPLNLRLLRSEESWELLEKRAFGNESCPDELLDVGKEIAENCKGLPLVVDLIAGIIAGREKKKSVWLEVVNNLHSFILKNEVEVMKVIEISYDHLPDHLKPCLLYFASAPKDWVTTIHELKLIWGFEGFVEKTDMKSLEEVVKIYLDDLISSSLVICFNEIGDYPTCQLHDLVHDFCLIKARKEKLCDRISSSAPSDLLPRQISIDYDDDEEHFGLNFVLFGSNKKRHSGKHLYSLTINGDELDDHLSDTFHLRHLRLLRTLHLESSFIMVKDSLLNEICMLNHLRYLSIGTEVKSLPLSFSNLWNLEILFVDNKESTLILLPRIWDLVKLQVLFTTACSFFDMDADESILIAEDTKLENLTALGELVLSYWKDTEDIFKRLPNLQVLHFKLKESWDYSTEQYWFPKLDFLTELEKLTVDFERSNTNDSGSSAAINRPWDFHFPSSLKRLQLHEFPLTSDSLSTIARLLNLEELYLYRTIIHGEEWNMGEEDTFENLKCLMLSQVILSKWEVGEESFPTLEKLELSDCHNLEEIPSSFGDIYSLKIIELVRSPQLENSALKIKEYAEDMRGGDELQILGQKDIPLFK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017:SF126 | 381-864 | PTHR11017:SF126,OS11G0237600 PROTEIN | VYLKVPDSSQYCFPMSDGPLFMHLLQRHLDDLLDSNAYSIALIKEQIGLVKEDLEFIRSFFANIEQGLYKDLWERVLDVAYEAKDVIDSIIVRDNGLLHLIFSLPITRKKMMLIKEEVSDLHENISKNRGLIVVNSPKKPVESKSLTTDKIIVGFGEETNLILRKLTSGPADLDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKKVALHGKLYTDPLNLRLLRSEESWELLEKRAFGNESCPDELLDVGKEIAENCKGLPLVVDLIAGIIAGREKKKSVWLEVVNNLHSFILKNEVEVMKVIEISYDHLPDHLKPCLLYFASAPKDWVTTIHELKLIWGFEGFVEKTDMKSLEEVVKIYLDDLISSSLVICFNEIGDYPTCQLHDLVHDFCLIKARKE |
| HMMPanther: PTHR11017 | 381-864 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VYLKVPDSSQYCFPMSDGPLFMHLLQRHLDDLLDSNAYSIALIKEQIGLVKEDLEFIRSFFANIEQGLYKDLWERVLDVAYEAKDVIDSIIVRDNGLLHLIFSLPITRKKMMLIKEEVSDLHENISKNRGLIVVNSPKKPVESKSLTTDKIIVGFGEETNLILRKLTSGPADLDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKKVALHGKLYTDPLNLRLLRSEESWELLEKRAFGNESCPDELLDVGKEIAENCKGLPLVVDLIAGIIAGREKKKSVWLEVVNNLHSFILKNEVEVMKVIEISYDHLPDHLKPCLLYFASAPKDWVTTIHELKLIWGFEGFVEKTDMKSLEEVVKIYLDDLISSSLVICFNEIGDYPTCQLHDLVHDFCLIKARKE |
| superfamily: SSF52540 | 513-760 | SSF52540 | VVNSPKKPVESKSLTTDKIIVGFGEETNLILRKLTSGPADLDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKKVALHGKLYTDPLNLRLLRSEESWELLEKRAFGNESCPDELLDVGKEIAENCKGLPLVVDLIAGIIAGREKKKSVWLEVVNNLHSFILKN |
| HMMPfam: PF00931 IPR002182
|
540-814 | NB-ARC,NBS NB-ARC
|
NLILRKLTSGPADLDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKKVALHGKLYTDPLNLRLLRSEESWELLEKRAFGNESCPDELLDVGKEIAENCKGLPLVVDLIAGIIAGREKKKSVWLEVVNNLHSFILKNEVEVMKVIEISYDHLPDHLKPCLLYFASAPKDWVTTIHELKLIWGFEGFVEKTD |
| Gene3D: G3DSA:3.40.50.300 | 553-671 | G3DSA:3.40.50.300 | LDVISIIGMPGLGKTTLAYKVYNDKSVSSHFDLRAWCTVDQVYDEKKLLDKIFNQVSDSNSKLSENIDVADKLRKQLFGKRYLIVLDDVWDTNTWDELTRPFPDGMKGSRIILTTREKK |
| FPrintScan: PR00364 IPR000767
|
555-570 | DISEASERSIST Disease resistance protein
|
VISIIGMPGLGKTTLA |
| FPrintScan: PR00364 IPR000767
|
628-642 | DISEASERSIST Disease resistance protein
|
QLFGKRYLIVLDDVW |
| FPrintScan: PR00364 IPR000767
|
722-736 | DISEASERSIST Disease resistance protein
|
CKGLPLVVDLIAGII |
| superfamily: SSF52058 | 848-1231 | SSF52058,LRR | QLHDLVHDFCLIKARKEKLCDRISSSAPSDLLPRQISIDYDDDEEHFGLNFVLFGSNKKRHSGKHLYSLTINGDELDDHLSDTFHLRHLRLLRTLHLESSFIMVKDSLLNEICMLNHLRYLSIGTEVKSLPLSFSNLWNLEILFVDNKESTLILLPRIWDLVKLQVLFTTACSFFDMDADESILIAEDTKLENLTALGELVLSYWKDTEDIFKRLPNLQVLHFKLKESWDYSTEQYWFPKLDFLTELEKLTVDFERSNTNDSGSSAAINRPWDFHFPSSLKRLQLHEFPLTSDSLSTIARLLNLEELYLYRTIIHGEEWNMGEEDTFENLKCLMLSQVILSKWEVGEESFPTLEKLELSDCHNLEEIPSSFGDIYSLKIIELVR |
| Gene3D: G3DSA:3.80.10.10 | 911-1101 | G3DSA:3.80.10.10 | KHLYSLTINGDELDDHLSDTFHLRHLRLLRTLHLESSFIMVKDSLLNEICMLNHLRYLSIGTEVKSLPLSFSNLWNLEILFVDNKESTLILLPRIWDLVKLQVLFTTACSFFDMDADESILIAEDTKLENLTALGELVLSYWKDTEDIFKRLPNLQVLHFKLKESWDYSTEQYWFPKLDFLTELEKLTVDF |
| Gene3D: G3DSA:3.80.10.10 | 1118-1230 | G3DSA:3.80.10.10 | PWDFHFPSSLKRLQLHEFPLTSDSLSTIARLLNLEELYLYRTIIHGEEWNMGEEDTFENLKCLMLSQVILSKWEVGEESFPTLEKLELSDCHNLEEIPSSFGDIYSLKIIELV |
| FPrintScan: PR00364 IPR000767
|
1195-1211 | DISEASERSIST Disease resistance protein
|
ESFPTLEKLELSDCHNL |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Late Blight Tomato | Phytophthora infestans |
List of References
Edwin A G van der Vossen, Jack Gros, Anne Sikkema, Marielle Muskens, Doret Wouters, Petra Wolters, Andy Pereira, Sjefke Allefs
The Rpi-blb2 gene from Solanum bulbocastanum is an Mi-1 gene homolog conferring broad-spectrum late blight resistance in potato.
Plant J.: 2005, 44(2);208-22
PubMed:16212601
WorldCat.org
DOI
(P p)
List of Contributions
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