PRGDB00000056 (Ve2)
| Ve2 | |
|---|---|
| Gene Type | Reference_R-Genes,_manually_curated |
| GenBank | 14269076 (AF365929) |
| Gene Class | RLP |
| Domain Type | LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Chromosome | 9 |
| Gene Species | Solanum lycopersicum |
DNA Sequence
ATGAGATTTTTACACTTTCTATGGATCTTCTTCATCATACCCTTTTTGCAAATTTTATTAGGTAATGAGATTTTATTGGTTTCCTCTCAATGTCTTGATGATCAAAAGTCATTGTTGCTGCAGTTGAAGGGCAGCTTCCAATATGATTCTACTTTGTCAAATAAATTGGCAAGATGGAACCACAACACAAGTGAATGTTGTAACTGGAATGGGGTTACATGTGACCTCTCTGGTCATGTGATTGCCTTGGAACTGGATGATGAGAAAATTTCTAGTGGAATTGAGAATGCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAGGCTAAATTTGGCTTACAACAAGTTCAATGTTGGCATACCAGTTGGTATAGGCAACCTCACCAACTTGACGTACCTGAATTTATCCAATGCCGGTTTTGTTGGCCAAATTCCTATGATGTTATCAAGGTTAACAAGGCTAGTTACTCTTGATCTCTCAACTCTTTTCCCTGACTTTGCCCAGCCACTAAAACTAGAGAATCCCAATTTGAGTCATTTCATTGAGAACTCAACAGAGCTTAGAGAGCTTTACCTTGATGGGGTTGATCTCTCAGCTCAGAGGACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTAACTTGACTGTCTTGAGCTTGCGTACTTGTCGAATTTCAGGCCCTATTGATGAATCACTTTCTAAGCTTCACTTTCTCTCTTTCATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCTGAATACTTTGCCAATTTCTCAAACTTGACTACCTTGACCCTCTCCTCTTGTAATCTGCAAGGAACATTTCCTAAAAGAATCTTTCAGGTACCAGTCTTAGAGTTTTTGGACTTGTCAACTAACAAATTGCTTAGTGGTAGTATTCCGATTTTTCCTCAAATTGGATCATTGAGGACGATATCACTAAGCTACACCAAGTTTTCTGGTTCATTACCAGACACCATTTCGAACCTTCAAAACCTATCCAGGTTAGAACTCTCCAACTGCAATTTCAGTGAACCAATACCTTCCACAATGGCGAACCTTACCAATCTTGTTTATTTAGATTTCTCCTTCAACAATTTCACTGGTTCCCTCCCATATTTCCAAGGGGCCAAGAAACTCATCTACTTGGACCTTTCACGTAATGGTCTAACTGGTCTCTTGTCTAGAGCTCATTTTGAAGGACTCTCAGAACTTGTCTACATTAATTTAGGGAACAATTCACTCAACGGGAGCCTTCCTGCATATATATTTGAGCTCCCCTCGTTGAAGCAGCTTTTTCTTTACAGCAATCAATTTGTTGGCCAAGTCGACGAATTTCGCAATGCATCCTCCTCTCCGTTGGATACAGTTGACTTGAGAAACAACCACCTGAATGGATCGATTCCCAAGTCCATGTTTGAAGTTGGGAGGCTTAAGGTCCTCTCACTTTCTTCCAACTTCTTTAGAGGGACAGTTCCCCTTGACCTCATTGGGAGGCTGAGCAACCTTTCAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCAGCAATTCAACCTCTTTCACATTTCCCCAGTTGAACATATTGAAATTAGCGTCTTGTCGGCTGCAAAAGTTCCCCGATCTCAAGAATCAGTCAAGGATGATGCACTTAGACCTTTCAGACAACCAAATATTGGGGGCAATACCAAATTGGATCTGGGGAATTGGTGGTGGAGGTCTCGCCCACCTGAATCTTTCATTCAATCAGCTGGAGTACGTGGAACAGCCTTACACTGTTTCCAGCAATCTTGTAGTCCTTGATTTGCATTCCAACCGTTTAAAAGGTGACTTACTAATACCACCTTCCACTGCCATCTATGTGGACTACTCGAGCAATAATTTAAACAATTCCATCCCAACAGATATTGGAAGATCTCTTGGTTTTGCCTCCTTTTTCTCGGTAGCAAACAATAGCATCACTGGAATAATTCCTGAATCCATATGCAACGTCAGCTACCTTCAAGTTCTTGATTTCTCTAACAATGCCTTGAGTGGAACAATACCACCATGTCTACTGGAATATAGTCCAAAACTTGGAGTGCTGAATCTAGGGAACAATAGACTCCATGGTGTTATACCAGATTCATTTCCAATTGGTTGTGCTCTAATAACTTTAGACCTCAGCAGGAATATCTTTGAAGGGAAGCTACCAAAATCGCTTGTCAACTGCACGTTGTTGGAGGTCCTGAATGTTGGAAATAACAGTCTTGTTGATCGTTTCCCATGCATGTTGAGGAACTCAACCAGCCTGAAGGTCCTAGTCTTGCGCTCCAATAAATTCAATGGAAATCTTACGTGTAATATAACCAAACATAGCTGGAAGAATCTCCAGATCATAGATATAGCTTCCAACAATTTTACTGGTATGTTGAATGCAGAATGCTTTACAAATTGGAGAGGAATGATGGTTGCAAAAGATTACGTGGAGACAGGACGCAATCATATCCAGTATGAGTTCTTACAACTAAGTAACTTGTACTATCAGGATACAGTGACATTAATCATCAAAGGCATGGAGCTGGAGCTTGTGAAGATTCTTAGGGTCTTCACATCTATTGATTTCTCTTCCAATAGATTTCAAGGAAAGATACCAGATACTGTTGGGGATCTTAGCTCACTTTATGTTTTGAACCTGTCACACAATGCCCTCGAGGGACCAATTCCAAAATCAATTGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAAGAAACCACCTGTCCGGGGAGATCCCCTCAGAGCTTTCAAGTCTCACATTCTTAGCAGTTTTGAACTTATCGTTCAACAATTTGTTTGGAAAAATCCCGCAAAGTAATCAATTTGAAACATTCTCAGCAGAATCCTTTGAAGGAAACAGAGGCCTATGCGGGCTCCCTCTTAACGTCATTTGCAAAAGCGATACTTCAGAGTTGAAACCAGCACCAAGTTCTCAAGATGACTCTTATGATTGGCAGTTCATATTTACGGGTGTGGGATATGGAGTAGGGGCAGCAATCTCCATTGCACCTCTGTTGTTTTACAAGCAAGGAAACAAATACTTTGACAAACATTTGGAGAGAATGCTTAAACTGATGTTTCCTAGATACTGGTTCAGTTACACCAGATTTGACCCTGGGAAGGTTGTGGCTGTGGAACACTATGAAGATGAGACCCCAGATGACACCGAAGATGACGATGAGGGTGGAAAAGAAGCATCTCTTGGGCGTTATTGTGTCTTCTGTAGTAAACTTGATTTTCAGAAAAATGAAGCAATGCATGATCCAAAATGCACTTGTCATATGTCATCATCCCCCAATTCTTTTCCTCCTACGCCGTCCTTTTTTTCACCTTTATTAGTCATATATCACAAAAAGTTTTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| verticillium wilt disease resistance protein Ve2 | verticillium wilt disease resistance protein Ve2 [Lycopersicon esculentum]. | MRFLHFLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQGNKYFDKHLERMLKLMFPRYWFSYTRFDPGKVVAVEHYEDETPDDTEDDDEGGKEASLGRYCVFCSKLDFQKNEAMHDPKCTCHMSSSPNSFPPTPSFFSPLLVIYHKKF |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF473 | 6-1029 | PTHR24420:SF473,SUBFAMILY NOT NAMED | FLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQ |
| HMMPanther: PTHR24420 | 6-1029 | PTHR24420,FAMILY NOT NAMED | FLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVICKSDTSELKPAPSSQDDSYDWQFIFTGVGYGVGAAISIAPLLFYKQ |
| superfamily: SSF52058 | 29-200 | SSF52058,LRR | SQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQ |
| Gene3D: G3DSA:3.80.10.10 | 30-303 | G3DSA:3.80.10.10 | QCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGIPVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIP |
| HMMPfam: PF08263 IPR013210
|
33-75 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
DDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD |
| superfamily: SSF52047 | 176-441 | SSF52047,LRR | NLSHFIENSTELRELYLDGVDLSAQRTEWCQSLSSYLPNLTVLSLRTCRISGPIDESLSKLHFLSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKLLSGSIPIFPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQF |
| HMMPfam: PF13855 | 239-297 | LRR_8,Leucine rich repeat | LSFIRLDQNNLSTTVPEYFANFSNLTTLTLSSCNLQGTFPKRIFQVPVLEFLDLSTNKL |
| Gene3D: G3DSA:3.80.10.10 | 305-519 | G3DSA:3.80.10.10 | FPQIGSLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNFTGSLPYFQGAKKLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDA |
| HMMPfam: PF13855 | 310-369 | LRR_8,Leucine rich repeat | SLRTISLSYTKFSGSLPDTISNLQNLSRLELSNCNFSEPIPSTMANLTNLVYLDFSFNNF |
| HMMPfam: PF13855 | 381-440 | LRR_8,Leucine rich repeat | KLIYLDLSRNGLTGLLSRAHFEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQ |
| FPrintScan: PR00019 | 382-395 | LEURICHRPT,Leucine-rich repeat signature | LIYLDLSRNGLTGL |
| superfamily: SSF52058 | 401-616 | SSF52058,LRR | FEGLSELVYINLGNNSLNGSLPAYIFELPSLKQLFLYSNQFVGQVDEFRNASSSPLDTVDLRNNHLNGSIPKSMFEVGRLKVLSLSSNFFRGTVPLDLIGRLSNLSRLELSYNNLTVDASSSNSTSFTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGD |
| Gene3D: G3DSA:3.80.10.10 | 527-716 | G3DSA:3.80.10.10 | FTFPQLNILKLASCRLQKFPDLKNQSRMMHLDLSDNQILGAIPNWIWGIGGGGLAHLNLSFNQLEYVEQPYTVSSNLVVLDLHSNRLKGDLLIPPSTAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSF |
| superfamily: SSF52058 | 622-984 | SSF52058,LRR | STAIYVDYSSNNLNNSIPTDIGRSLGFASFFSVANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRLHGVIPDSFPIGCALITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPLNVIC |
| HMMPfam: PF13855 | 654-708 | LRR_8,Leucine rich repeat | VANNSITGIIPESICNVSYLQVLDFSNNALSGTIPPCLLEYSPKLGVLNLGNNRL |
| Gene3D: G3DSA:3.80.10.10 | 722-980 | G3DSA:3.80.10.10 | LITLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLVDRFPCMLRNSTSLKVLVLRSNKFNGNLTCNITKHSWKNLQIIDIASNNFTGMLNAECFTNWRGMMVAKDYVETGRNHIQYEFLQLSNLYYQDTVTLIIKGMELELVKILRVFTSIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAVLNLSFNNLFGKIPQSNQFETFSAESFEGNRGLCGLPL |
| HMMPfam: PF13855 | 871-927 | LRR_8,Leucine rich repeat | SIDFSSNRFQGKIPDTVGDLSSLYVLNLSHNALEGPIPKSIGKLQMLESLDLSRNHL |
| FPrintScan: PR00019 | 914-927 | LEURICHRPT,Leucine-rich repeat signature | LQMLESLDLSRNHL |
Diseases
| Disease | Pathogen | Avirulence gene |
|---|---|---|
| Verticillium wilt Potato | Verticillium |
List of References
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