PRGDB00000481 (At1)
At1 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 18032027 (AY066012) |
Gene Class | Other |
Domain Type | Ser-Thr Kinase |
Gene Species | Cucumis melo |
DNA Sequence
ATGGATTACGTTTATGCACCTGGAAAGAACCATCTCTTTGTCCCAGGGCCGGTCAACATTCCCGAACCGGTTCTGCGGGCAATGAACCGAAACAATGAGGATTATCGTTCGCCTGCCGTTCCTGCTTTGACGAAAACTCTTCTTGAAGATGTGAAAAAGATTTTCAAATCTACTACTGGAACCACATTCCTGATTCCCACAACAGGTACTGGTGCTTGGGAAAGTGCTCTTACAAACACATTGTCTCCTGGAGATAGGATCGTGTCCTTTCTCATTGGCCAGTTCAGTCTGCTCTGGATTGATCAGCAGCAGCGCCTTAACTTCAACGTCGATGTCGTCGAGAGCGACTGGGGTCAGGGTGCCAATCTTGATGTTCTGGAATCAAAGCTTGCCACCGATGGCGGCCACACCATCAAGGCAATTTGCATTGTCCACAATGAGACAGCTACTGGTGTCACTAATGACCTGTCTAAAGTTCGGTTCCTACTTGATAAGTACAAGCATCCTGCTCTTTTGCTGGTCGACGGAGTGTCATCCATATGTGCACTTGATTTTCGAATGGATGAATGGGGAGTCGACGTTGCTTTAACTGGTTCCCAAAAGGCTCTTTCTCTCCCTACAGGACTTGGAATTATTTGTGCCAGTCCCAAAGCACTAGAAGCATCCAAAACTTCAAAATCTGTCAAAGTCTTCTTTGATTGGAAAGACTATCTCAAATTCTACAATCTAGGAACATACTGGCCATACACCCCTTCCATTCAGCTCTTGTATGGATTAAGAGCAGCTCTCGATCTTCTTTTCGAGGAAGGTTTGGACAATGTGATTGCTCGGCACAGTCGTCTTGGCAAAGCAACAAGGCTTGCTGTGGAGGCTTGGGGGTTGAAAAATTGTACACAAAAAGAGGAATGGTTTAGTGACACTGTTACTGCTGTGCTTGTTCCTTCTTACATTGACAGTGCAGAAATTGTGAGAAGGGCATGGAAGAGATACAATTTGAGCTTGGGACTTGGCCTTAACAAAGTTGCTGGCAAAGTATTCAGAATTGGTCACCTTGGAAACCTTAATGAGTTGCAACTGTTGGGATGTCTTGCTGGTGTAGAAATGGTACTGAAGGATGTCGGGTACCCTGTTAAACTAGGGAGTGGAGTTGCTGCAGCTAGTGCATATCTTCAAAATAACATCCCTCTCATTCCTTCAAGGATTTAA
Protein sequences
Name | Description | Sequence |
---|---|---|
aminotransferase 1 | aminotransferase 1 [Cucumis melo]. | MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR21152 | 1-401 | PTHR21152,AMINOTRANSFERASE CLASS V | MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI |
HMMPanther: PTHR21152:SF7 | 1-401 | PTHR21152:SF7,SUBFAMILY NOT NAMED | MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI |
HMMPIR: PIRSF000524 IPR024169
|
3-396 | SPT Serine-pyruvate aminotransferase/2-aminoethylphosp
|
YVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPL |
superfamily: SSF53383 IPR015424
|
7-377 | PyrdxlP-dep_Trfase_major Pyridoxal phosphate-dependent transferase, major d
|
PGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPV |
HMMPfam: PF00266 IPR000192
|
12-323 | Aminotran_5 Aminotransferase, class V/Cysteine desulfurase
|
LFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIV |
Gene3D: G3DSA:3.40.640.10 IPR015421
|
21-257 | PyrdxlP-dep_Trfase_major_sub1 Pyridoxal phosphate-dependent transferase, major r
|
PEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLY |
PatternScan: PS00595 IPR020578
|
192-212 | AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi
|
VDVALTGSQKALSLPTGLGII |
Gene3D: G3DSA:3.90.1150.10 IPR015422
|
258-383 | PyrdxlP-dep_Trfase_major_sub2 Pyridoxal phosphate-dependent transferase, major r
|
GLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGV |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Downy mildew mellon |
List of References
Dvir Taler, Marjana Galperin, Ido Benjamin, Yigal Cohen, David Kenigsbuch
Plant eR genes that encode photorespiratory enzymes confer resistance against disease.
Plant Cell: 2004, 16(1);172-84
PubMed:14688292
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.