PRGDB00000481 (At1)

At1
Gene Type	Reference_R-Genes,_manually_curated
GenBank	18032027 (AY066012)
Gene Class	Other
Domain Type	Ser-Thr Kinase
Gene Species	Cucumis melo
	Comment?

Cucumis melo aminotransferase 1 mRNA, complete cds.

DNA Sequence

ATGGATTACGTTTATGCACCTGGAAAGAACCATCTCTTTGTCCCAGGGCCGGTCAACATTCCCGAACCGGTTCTGCGGGCAATGAACCGAAACAATGAGGATTATCGTTCGCCTGCCGTTCCTGCTTTGACGAAAACTCTTCTTGAAGATGTGAAAAAGATTTTCAAATCTACTACTGGAACCACATTCCTGATTCCCACAACAGGTACTGGTGCTTGGGAAAGTGCTCTTACAAACACATTGTCTCCTGGAGATAGGATCGTGTCCTTTCTCATTGGCCAGTTCAGTCTGCTCTGGATTGATCAGCAGCAGCGCCTTAACTTCAACGTCGATGTCGTCGAGAGCGACTGGGGTCAGGGTGCCAATCTTGATGTTCTGGAATCAAAGCTTGCCACCGATGGCGGCCACACCATCAAGGCAATTTGCATTGTCCACAATGAGACAGCTACTGGTGTCACTAATGACCTGTCTAAAGTTCGGTTCCTACTTGATAAGTACAAGCATCCTGCTCTTTTGCTGGTCGACGGAGTGTCATCCATATGTGCACTTGATTTTCGAATGGATGAATGGGGAGTCGACGTTGCTTTAACTGGTTCCCAAAAGGCTCTTTCTCTCCCTACAGGACTTGGAATTATTTGTGCCAGTCCCAAAGCACTAGAAGCATCCAAAACTTCAAAATCTGTCAAAGTCTTCTTTGATTGGAAAGACTATCTCAAATTCTACAATCTAGGAACATACTGGCCATACACCCCTTCCATTCAGCTCTTGTATGGATTAAGAGCAGCTCTCGATCTTCTTTTCGAGGAAGGTTTGGACAATGTGATTGCTCGGCACAGTCGTCTTGGCAAAGCAACAAGGCTTGCTGTGGAGGCTTGGGGGTTGAAAAATTGTACACAAAAAGAGGAATGGTTTAGTGACACTGTTACTGCTGTGCTTGTTCCTTCTTACATTGACAGTGCAGAAATTGTGAGAAGGGCATGGAAGAGATACAATTTGAGCTTGGGACTTGGCCTTAACAAAGTTGCTGGCAAAGTATTCAGAATTGGTCACCTTGGAAACCTTAATGAGTTGCAACTGTTGGGATGTCTTGCTGGTGTAGAAATGGTACTGAAGGATGTCGGGTACCCTGTTAAACTAGGGAGTGGAGTTGCTGCAGCTAGTGCATATCTTCAAAATAACATCCCTCTCATTCCTTCAAGGATTTAA

Protein sequences

Name	Description	Sequence
aminotransferase 1	aminotransferase 1 [Cucumis melo].	MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR21152	1-401	PTHR21152,AMINOTRANSFERASE CLASS V	MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI
HMMPanther: PTHR21152:SF7	1-401	PTHR21152:SF7,SUBFAMILY NOT NAMED	MDYVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPLIPSRI
HMMPIR: PIRSF000524 IPR024169	3-396	SPT Serine-pyruvate aminotransferase/2-aminoethylphosp	YVYAPGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGVAAASAYLQNNIPL
superfamily: SSF53383 IPR015424	7-377	PyrdxlP-dep_Trfase_major Pyridoxal phosphate-dependent transferase, major d	PGKNHLFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPV
HMMPfam: PF00266 IPR000192	12-323	Aminotran_5 Aminotransferase, class V/Cysteine desulfurase	LFVPGPVNIPEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLYGLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIV
Gene3D: G3DSA:3.40.640.10 IPR015421	21-257	PyrdxlP-dep_Trfase_major_sub1 Pyridoxal phosphate-dependent transferase, major r	PEPVLRAMNRNNEDYRSPAVPALTKTLLEDVKKIFKSTTGTTFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLATDGGHTIKAICIVHNETATGVTNDLSKVRFLLDKYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIICASPKALEASKTSKSVKVFFDWKDYLKFYNLGTYWPYTPSIQLLY
PatternScan: PS00595 IPR020578	192-212	AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi	VDVALTGSQKALSLPTGLGII
Gene3D: G3DSA:3.90.1150.10 IPR015422	258-383	PyrdxlP-dep_Trfase_major_sub2 Pyridoxal phosphate-dependent transferase, major r	GLRAALDLLFEEGLDNVIARHSRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVLVPSYIDSAEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMVLKDVGYPVKLGSGV

Diseases

Disease	Pathogen	Avirulence gene
Downy mildew mellon

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Analyses

Blast

Blast matches against Reference R-Genes. Show