PRGDB00035715 (Bs3-E)

Bs3-E
Gene Type	Reference_R-Genes,_manually_curated
GenBank	158851512 (EU078683)
Gene Class	Other
Domain Type	NBS
Gene Species	Capsicum annuum
	Comment?

Capsicum annuum cultivar ECW Bs3-E (Bs3-E) gene, complete cds.

DNA Sequence

ATGATGAATCAGAATTGCTTTAATTCTTGTTCACCTCTAACTGTTGATGCACTTGAACCAAAAAAATCCTCTTGTGCTGCTAAATGCATACAAGTAAATGGTCCTCTTATTGTTGGAGCTGGCCCTTCAGGCCTGGCTACTGCTGCCGTCCTTAAGCAATACAGTGTTCCGTATGTAATCATTGAACGCGCGGACTGCATTGCTTCTCTGTGGCAACACAAGACCTACGATCGGCTTAGGCTTAACGTGCCACGACAATACTGCGAATTGCCTGGCTTGCCATTTCCACCAGACTTTCCAGAGTATCCAACCAAAAACCAATTCATCAGCTACCTCGTATCTTATGCAAAGCATTTCGAGATCAAACCACAACTCAACGAGTCAGTAAACTTAGCTGGATATGATGAGACATGTGGTTTATGGAAGGTGAAAACAGTTTCTGAAATCAATGGTTCAACCTCTGAATACATGTGTAAGTGGCTTATTGTGGCCACAGGAGAGAATGCTGAGATGATAGTGCCCGAATTCGAAGGATTGCAAGATTTTGGTGGCCAGGTTATTCATGCTTGTGAGTACAAGACTGGGGAATACTATACTGGAGAAAATGTGCTGGCGGTTGGCTGTGGCAATTCCGGGATCGATATCTCACTTGATCTTTCCCAACATAATGCAAATCCATTCATGGTAGTTCGAAGCTCGGTACAGGGTCGTAATTTCCCTGAGGAAATAAACATAGTTCCAGCAATCAAGAAATTTACTCAAGGAAAAGTAGAATTTGTTAATGGACAAATTCTAGAGATCGACTCTGTTATCTTGGCAACTGGTTATACCAGCAATGTAACTTCTTGGTTAATGGAGAGTGAATTTTTTTCAAGGGAGGGATGTCCAAAAAGCCCATTCCCAAATGGTTGGAAGGGGGAGGATGGTCTCTATGCAGTTGGATTTACAGGAATAGGACTGTTTGGTGCTTCTATAGATGCCACTAATGTTGCACAAGATATTGCCAAAATTTGGAAAGAACAAATGTAG

Protein sequences

Name	Description	Sequence
Bs3-E	Bs3-E [Capsicum annuum].	MMNQNCFNSCSPLTVDALEPKKSSCAAKCIQVNGPLIVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVRSSVQGRNFPEEINIVPAIKKFTQGKVEFVNGQILEIDSVILATGYTSNVTSWLMESEFFSREGCPKSPFPNGWKGEDGLYAVGFTGIGLFGASIDATNVAQDIAKIWKEQM

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR23023	1-342	PTHR23023,DIMETHYLANILINE MONOOXYGENASE	MMNQNCFNSCSPLTVDALEPKKSSCAAKCIQVNGPLIVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVRSSVQGRNFPEEINIVPAIKKFTQGKVEFVNGQILEIDSVILATGYTSNVTSWLMESEFFSREGCPKSPFPNGWKGEDGLYAVGFTGIGLFGASIDATNVAQDIAKIWKEQM
HMMPanther: PTHR23023:SF5	1-342	PTHR23023:SF5,MONOOXYGENASE	MMNQNCFNSCSPLTVDALEPKKSSCAAKCIQVNGPLIVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVRSSVQGRNFPEEINIVPAIKKFTQGKVEFVNGQILEIDSVILATGYTSNVTSWLMESEFFSREGCPKSPFPNGWKGEDGLYAVGFTGIGLFGASIDATNVAQDIAKIWKEQM
FPrintScan: PR00469 IPR000103	34-56	PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla	GPLIVGAGPSGLATAAVLKQYSV
FPrintScan: PR00368 IPR013027	35-54	FADPNR FAD-dependent pyridine nucleotide-disulphide oxido	PLIVGAGPSGLATAAVLKQY
superfamily: SSF51905	36-242	SSF51905	LIVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVRSSVQGRNFPEE
Gene3D: G3DSA:3.50.50.60	37-214	G3DSA:3.50.50.60	IVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGID
HMMPfam: PF00743 IPR020946	37-231	FMO-like Flavin monooxygenase-like	IVGAGPSGLATAAVLKQYSVPYVIIERADCIASLWQHKTYDRLRLNVPRQYCELPGLPFPPDFPEYPTKNQFISYLVSYAKHFEIKPQLNESVNLAGYDETCGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVR
ProfileScan: PS01180 IPR000859	138-246	CUB CUB	CGLWKVKTVSEINGSTSEYMCKWLIVATGENAEMIVPEFEGLQDFGGQVIHACEYKTGEYYTGENVLAVGCGNSGIDISLDLSQHNANPFMVVRSSVQGRNFPEEINIV
FPrintScan: PR00368 IPR013027	158-176	FADPNR FAD-dependent pyridine nucleotide-disulphide oxido	CKWLIVATGENAEMIVPEF
FPrintScan: PR00469 IPR000103	198-222	PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla	YTGENVLAVGCGNSGIDISLDLSQH
FPrintScan: PR00368 IPR013027	202-220	FADPNR FAD-dependent pyridine nucleotide-disulphide oxido	NVLAVGCGNSGIDISLDLS
Gene3D: G3DSA:3.50.50.60	215-268	G3DSA:3.50.50.60	ISLDLSQHNANPFMVVRSSVQGRNFPEEINIVPAIKKFTQGKVEFVNGQILEID
superfamily: SSF51905	249-336	SSF51905	IKKFTQGKVEFVNGQILEIDSVILATGYTSNVTSWLMESEFFSREGCPKSPFPNGWKGEDGLYAVGFTGIGLFGASIDATNVAQDIAK
FPrintScan: PR00368 IPR013027	267-283	FADPNR FAD-dependent pyridine nucleotide-disulphide oxido	IDSVILATGYTSNVTSW
Gene3D: G3DSA:3.50.50.60	269-339	G3DSA:3.50.50.60	SVILATGYTSNVTSWLMESEFFSREGCPKSPFPNGWKGEDGLYAVGFTGIGLFGASIDATNVAQDIAKIWK

Diseases

Disease	Pathogen	Avirulence gene
Bacterial Spot	Xanthomonas campestris pv. vesicatoria str. 85-10	PRGAV00000049

List of References

Patrick Römer, Simone Hahn, Tina Jordan, Tina Strauss, Ulla Bonas, Thomas Lahaye
Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene.
Science: 2007, 318(5850);645-8
PubMed:17962564 WorldCat.org DOI (I p)

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Analyses

Blast

Blast matches against Reference R-Genes. Show