PRGDB00035726 (RPG1)
RPG1 | |
---|---|
Gene Type | Reference_R-Genes,_manually_curated |
GenBank | 117621925 (DQ854803) |
Gene Class | RLK |
Domain Type | Ser-Thr Kinase, Ser-Thr Kinase |
Gene Species | Hordeum vulgare |
DNA Sequence
ATGGCGGCTGCCAGGAAGAAGATCGTGGTGAAGGTTGAGCTGAAAGACGACAGCCAGTGCAGGAAGGCGCTCAAAGCACTCTCTGCTCTCCGCGGCGTCTATGCGATTTCTTTTAACCGGGGGCATGGGAACATCACGGTCGTCGGCGAGGTTAACCCCGAGGATGTCCTGGCCAGGCTGCAAAAGAAGTTGTTTCCAAACGCTCAGATCGTCGCCGTCGGGCCCGCCAAGGAGAGGTCAAAGTACGAACTTACGTTCGAGTTCTTGAACCGTATCACAAACAATTTCTCCGAGGAGCGCATCATTGCTCGTGGTGGCCATGGAGTAGTTTACAAGGCAGTGCTGGACAATGGGCAGTACATTGCTGTCAAGAAGCTTCACCTCATGCCGGAGCTGGACGATGAGGAATTCAAAAACGAGTTTAATAATCTTATGAGGGTCCGACATCAAAATATCATACCGTTGGTTGGTTACTGCCATCATACAAAACAGGTGCTTGTTGAGCACAGTGGAAAGCATGTTTCTGCTCGAGTAGAAGAAAGATATTTATGCTCCGAATACTTGGAGGGAGGAAGCCTTGACAAGCATCTTTCTAATGAACCATGCGCACTTGCTTGGTACACATGTTACAAAATAATTAAAGGCATCTGTGATGGTTTACTTTGCCTTCACAAGGGATTCCAAGAGCCTATTTGGCATTTAGAATTAAAACCTACAAAAATTTTGCTGGATAAGGACATGATGCCCAAAATTGGAGGTTTTGGTTTCTCTAGACTCTTTGATTCAATAGAAACCTCCAGCACATCAGAAGTTAGGGGAACAAGTGTATATATGCCACCAGAATACATCAGTAAACGGCTAATCACATCAAGGTTTAATGTATTCAGTCTGGGTGTCATAATCTTGCAAATTATGGCAGGAAAGGAGAGCTATACCAAATGTGTAGACATTCCACCCGAAGAATTTACTGAGCGTGTATATGGATTCTGGGTAAATAGGATGCCGGGCACAGTATCGAAGCATACTTCCAATGAAGTTAAAACATGCATCGAAATAGCTCTAAAATGCGTGGAGTCCAATCGAGTGAACAGGCCTACTATAAATGAGATCATACAAAGGATGGATAAGATTGATATTGTTGAGTGCTCATCTTTAGGTGATCTATATAAGACAAGGGAGTTTGCATTCGAGTTCTTAGAACATATTACAAATGTTTTTTCTGAGCAGAACATAGTTGGTCGTGGTGCATGTGGTGTTATTTACAAGGGAGTGTTGGACAATGGAGAAGAAATTGCTGTTAAGAAACTTCATCAAACGTTGTCTATTGATGATGGGCTATTTAAGAAAGAGGTTAATAATGTAATGAGGGCCGAACATAAAAATATTGTACGGTTAGTTGGCTACTGCCACCATATATCACCAATAATTGTTGAGCACGAAGGAAAACATGTTTCTGCTAGTGTGATAGAAAGAGTGATTTGTTTCGAATACATGCAACGAGGAAGCCTTGACGACCAACTTTCAGCTGAATCCTGCAAACTTGATTGGGACAGATGTTACAAAATAATAAAAGGAATATGTGAGGGGTTACATTACCTTCATAATGCTGTCCCTCCCATTTACCATGGGGACTTAAAACCCGGAAATATTTTGCTGGATAAGGATATGGTGGCAAAGATCGGCGATTTTGGTTTGTCAAGAGTCTTTGATACAACGCAAACCTATATGACAACATCCGGAGTTATTAAAGGAACACCTGGATACATGTCACCAGAATACATCAATGAACATAAGATCAGTCTGAAGTCTGATGTATTTGCTCTCGGGGTCATAATCATAAAAATGATGACAGGAAAGGAGGACTACTCCAACTATGCACACACCCCTCGGGAAGAATTTATTGAGCATGTATGTAAAAAATGGCAAGTGAGGCTGCATGCAACAATGCGGTCCCATGTATTTGAAGAAGTGAGGACATGCATCGGAATAGCATTAAAATGTGTGGAGGATGACCGAACTCAAAGGCCTACGATGGCTCAGATTTTGAATGAATTAAGTAACATTGGTATTGTTAAGAGATCACCAGTAGATCGGGAAACAATGTCTACCCATGTATCCGAAGAAGTGAGGACATGCATCGAAATAGTGTTAAAATGTGTGGAGGATGACAGAACGCAAAGGCCTACAATAGCCCAGATTGTTAATGAACTAAGTAAGATTGGTATTGCTAAAGGTTCATCCATCAGCCAGATTTCCCAGGCTACTTCTTTCAGCCCAGAGCAGACGGCACAAGGAGGAGGCCATCAGGTAAACAAGCTGACTGCAACGCCACTAGAAGAAAAGTCGAGATCATGCCCTGGCCAAGCGTGCAAAGAACTGAAGCTAAAGAGGAAAGTAAAACTGAAGTTGAAGAGGAACGTAAAATGA
Protein sequences
Name | Description | Sequence |
---|---|---|
RPG1 | RPG1 [Hordeum vulgare subsp. vulgare]. | MAAARKKIVVKVELKDDSQCRKALKALSALRGVYAISFNRGHGNITVVGEVNPEDVLARLQKKLFPNAQIVAVGPAKERSKYELTFEFLNRITNNFSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQRMDKIDIVECSSLGDLYKTREFAFEFLEHITNVFSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDDGLFKKEVNNVMRAEHKNIVRLVGYCHHISPIIVEHEGKHVSASVIERVICFEYMQRGSLDDQLSAESCKLDWDRCYKIIKGICEGLHYLHNAVPPIYHGDLKPGNILLDKDMVAKIGDFGLSRVFDTTQTYMTTSGVIKGTPGYMSPEYINEHKISLKSDVFALGVIIIKMMTGKEDYSNYAHTPREEFIEHVCKKWQVRLHATMRSHVFEEVRTCIGIALKCVEDDRTQRPTMAQILNELSNIGIVKRSPVDRETMSTHVSEEVRTCIEIVLKCVEDDRTQRPTIAQIVNELSKIGIAKGSSISQISQATSFSPEQTAQGGGHQVNKLTATPLEEKSRSCPGQACKELKLKRKVKLKLKRNVK |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPfam: PF00403 IPR006121
|
21-63 | HMA Heavy metal-associated domain, HMA
|
RKALKALSALRGVYAISFNRGHGNITVVGEVNPEDVLARLQKK |
superfamily: SSF56112 IPR011009
|
68-374 | Kinase_like Protein kinase-like domain
|
AQIVAVGPAKERSKYELTFEFLNRITNNFSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQRM |
HMMPanther: PTHR24420 | 82-444 | PTHR24420,FAMILY NOT NAMED | YELTFEFLNRITNNFSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQRMDKIDIVECSSLGDLYKTREFAFEFLEHITNVFSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDD |
HMMPanther: PTHR24420:SF754 | 82-444 | PTHR24420:SF754 | YELTFEFLNRITNNFSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQRMDKIDIVECSSLGDLYKTREFAFEFLEHITNVFSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDD |
Gene3D: G3DSA:3.30.200.20 | 83-155 | G3DSA:3.30.200.20 | ELTFEFLNRITNNFSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPL |
ProfileScan: PS50011 IPR000719
|
96-377 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSEERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQRMDKI |
HMMPfam: PF00069 IPR000719
|
98-373 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
EERIIARGGHGVVYKAVLDNGQYIAVKKLHLMPELDDEEFKNEFNNLMRVRHQNIIPLVGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQR |
Gene3D: G3DSA:1.10.510.10 | 156-373 | G3DSA:1.10.510.10 | VGYCHHTKQVLVEHSGKHVSARVEERYLCSEYLEGGSLDKHLSNEPCALAWYTCYKIIKGICDGLLCLHKGFQEPIWHLELKPTKILLDKDMMPKIGGFGFSRLFDSIETSSTSEVRGTSVYMPPEYISKRLITSRFNVFSLGVIILQIMAGKESYTKCVDIPPEEFTERVYGFWVNRMPGTVSKHTSNEVKTCIEIALKCVESNRVNRPTINEIIQR |
superfamily: SSF56112 IPR011009
|
378-708 | Kinase_like Protein kinase-like domain
|
DIVECSSLGDLYKTREFAFEFLEHITNVFSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDDGLFKKEVNNVMRAEHKNIVRLVGYCHHISPIIVEHEGKHVSASVIERVICFEYMQRGSLDDQLSAESCKLDWDRCYKIIKGICEGLHYLHNAVPPIYHGDLKPGNILLDKDMVAKIGDFGLSRVFDTTQTYMTTSGVIKGTPGYMSPEYINEHKISLKSDVFALGVIIIKMMTGKEDYSNYAHTPREEFIEHVCKKWQVRLHATMRSHVFEEVRTCIGIALKCVEDDRTQRPTMAQILNELSNIGIVKRSPVDRETMSTHVSEE |
Gene3D: G3DSA:3.30.200.20 | 390-461 | G3DSA:3.30.200.20 | KTREFAFEFLEHITNVFSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDDGLFKKEVNNVMRAEHKN |
ProfileScan: PS50011 IPR000719
|
406-690 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSEQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDDGLFKKEVNNVMRAEHKNIVRLVGYCHHISPIIVEHEGKHVSASVIERVICFEYMQRGSLDDQLSAESCKLDWDRCYKIIKGICEGLHYLHNAVPPIYHGDLKPGNILLDKDMVAKIGDFGLSRVFDTTQTYMTTSGVIKGTPGYMSPEYINEHKISLKSDVFALGVIIIKMMTGKEDYSNYAHTPREEFIEHVCKKWQVRLHATMRSHVFEEVRTCIGIALKCVEDDRTQRPTMAQILNELSNIGI |
HMMPfam: PF00069 IPR000719
|
408-684 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
EQNIVGRGACGVIYKGVLDNGEEIAVKKLHQTLSIDDGLFKKEVNNVMRAEHKNIVRLVGYCHHISPIIVEHEGKHVSASVIERVICFEYMQRGSLDDQLSAESCKLDWDRCYKIIKGICEGLHYLHNAVPPIYHGDLKPGNILLDKDMVAKIGDFGLSRVFDTTQTYMTTSGVIKGTPGYMSPEYINEHKISLKSDVFALGVIIIKMMTGKEDYSNYAHTPREEFIEHVCKKWQVRLHATMRSHVFEEVRTCIGIALKCVEDDRTQRPTMAQILNE |
Gene3D: G3DSA:1.10.510.10 | 462-685 | G3DSA:1.10.510.10 | IVRLVGYCHHISPIIVEHEGKHVSASVIERVICFEYMQRGSLDDQLSAESCKLDWDRCYKIIKGICEGLHYLHNAVPPIYHGDLKPGNILLDKDMVAKIGDFGLSRVFDTTQTYMTTSGVIKGTPGYMSPEYINEHKISLKSDVFALGVIIIKMMTGKEDYSNYAHTPREEFIEHVCKKWQVRLHATMRSHVFEEVRTCIGIALKCVEDDRTQRPTMAQILNEL |
PatternScan: PS00108 IPR008271
|
540-552 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IYHGDLKPGNILL |
Diseases
Disease | Pathogen | Avirulence gene |
---|---|---|
Stem Rust | Puccinia graminis |
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