PRGDB00044657 (Disease resistance protein)
| Disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 66473096 (AC153125) |
| Gene Class | NL |
| Domain Type | LRR, NBS, LRR, LRR, Others |
| Gene Species | Medicago truncatula |
DNA Sequence
ATGGCAGTTGAATTTGTTGGTGGTGCTCTTCTTTCCGCTTTCCTTCAAGTCACATTCGAAAAGCTTGCTTCTGCTGAAATCGGAGACTACTTTCGAAGAACAAAACTCAATCACAATCTTCTAAAGAAACTCAACATCACACTTCTCTCCATCGATGCTGTGGTCGATGATGCAGAACTGAAGCAGATCAGAAATCCAAACGTGAGAGCATGGCTTGATGCTGTCAAAGATGCTGTGTTAGATGCAGAGGATCTCTTGGAAGAAATTGACTTTGAGGTTTCCAAATCTAAGCTGGAAGCTGAATCTCAATCTACTACTAACAAGGTATGGAACTTCTTCAATGCTTCTTCCAGTTCGTTTGACAAAGAAATTGAAACAAAGATGCAAGAAGTACTTGATAACCTAGAATATCTTTCTAGCAAAAAGGATATACTAGATTTGAAAAAGTCTACCAGTAGTTTTGATGTTGGATCTGGTAGCCAAGTGTCACAAAAATTGCCATCAACATCTTTGCCTGTTGATTCTATTATCTATGGCAGAGATGTTGATAAGGAGGTTATCTATGATTGGCTAAAATCTGACCCTGACAATGCAAACCATCAACTTTCAATAGTCTCTATAGTTGGTATGGGCGGGATGGGTAAGACCACGCTAGCCCAACATCTATACAATGACCCAAAGATGAAGGAAACATTTGATGTCAAAGCTTGGGTCTGTGTGTCAGAAGAATTTGATGTTTTCAAGGTAACAAGATCAATTCTTGAGGGTATCACTGGATCAACTGATGATAGCAGAGACCTAAATATGGTTCAAGAAAGGTTGAAGGAAAAATTGACAGGGAAGATATTTCTTCTTGTTTTAGATGACCTTTGGAACGAAAAACGTGACAAATGGATGACTTTGCAAACTCCTTTTAATTATGCGGCACATGGAAGCAAAATTCTTGTCACTACCCGTAGTGAGAAAGTTGCCTCAATCATGCGATCAAATAAAATGCTTCAACTTGATCAATTAGAAGAAGAACACTGCTGGAAGTTGTTTGCTAAACACGCGTGCCAAGATGAAGATCCTCAACTTAATCATGAGTTTAAGGACATTGCTAAAAGGATAATTACAAAATGCCAAGGATTGCCTCTAGCTTTGAAAACAATTGGAAGCCTCTTGTACACAAAATCATCTTTGGTGGAATGGAAAATAATATTGTCAAGCAAGATATGGGATTTACCAGAGGAGGAGAACAACATCATCCCTGCTTTAATGTTGAGCTATCATCACCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCCTTATTCCCCAAAAATTATGTGTTTAAAAAGGAGCATTTAATTTTATTATGGATGGCTGAAAATTTTCTACAATGCTCTCGACAGAGTATGAGTATGGAAGAAGTTGGGGAACAGTACTTCAATGATCTATTTTCGAGGTCATTTTTTCAGCAATCAAGGCGGTATAAAATGCAATTTATAATGCATGACCTTCTCAATGATTTGGCAAAATGTGTAAGTGGGGATTTTTCCTTTACATTTGAAGCTGAGGAATCGAATAATTTGTTGAACACGACTCGCCATTTTTCATTTACAAAAAATCCGTGTAAAGGTTCCAAAATATTTGAGACCTTACACAATGCTTATAAATCGCGCACATTCCTACCATTAGATATGACATCCTATGGTATTCCATCTCAATACCGGATATCTAGCACAGTGATGCAAGAGTTGTTCTCAAAGTTTAAGTTCTTTCGTGTCTTGTCGTTCTCTAGTTGCTCCTTTGAGAAGGAGTTGCCTGATACCATAGGCAATCTTAAACATCTCCGTTATCTAGACCTTTCTGGTAATTATAGCATAAAAAAGCTACCTGATTCAGTGTGTTATCTTTACAACTTGCAAACACTGAAGTTGAGGCATTGTTGGGGTTTGGAAGAGTTGCCCTTGAATTTGCATAAACTCACTAATTTGCGTTATCTTGATTTTAGTGGAACTAAAGTGAGAAAAATGCCAACGGCTATGGGGAAACTAAAACATCTTCAAGTGTTGAGTTCGTTTTATGTGGACAAAGGTAGCGAGGCCAATATTCAACAGTTAGGAGAACTCAATCTTCATGAAACACTATCAATTTTAGCGTTGCAAAACATTGACAATCCCTCTGATGCATCTGCAGCAAATTTAATAAATAAAGTACATCTTGTGAAGCTAGAGTTAGAATGGAATGCAAATAGTGATAATTCAGAGAAAGAAAGGGTAGTGCTTGAGAAGCTACAACCTTCCAAACACTTGAAGGAGTTATCTATCCGGAGCTATGGTGGTACACAATTTCCAAGCTGGTTTGGAGATAATTCATTATCAAATGTGGTGTCCTTAAAGTTGAGCAGTTGTAAAAACTGTGTGTTGTTGCCCCCACTTGGAATTTTGCCATCTCTCAAAGAACTGGAGATCGAAGAGCTATCTGGGCTAGTGGTTATTGGTAGTGAGTTTTATGGGAATGGGAGTGGTTCTTCTTCTGTTATTATTCCATTTGCTTCTTTGCAAACCTTACAATTCAAGGATATGGGGGAATGGGAAGAATGGGATTGTAAAATAGTGTCGGGTGCTTTTCCATGTCTCCAAGCACTTTCTATAGACAATTGTCCAAATTTAAAAGAGTGTTTGCCTGTGAACCTTCCCAGTTTAACGAAACTTCGAATTTATTTTTGTGCACGGCTTACTTCTTCTGTGTCATGGGGCACATCCATTCAGGACTTACATATAACTAATTGTGGAAAGCTGCAATTTGATAAACAGCTAACTAGTTTGAAATTTCTCAGTATTGGTGGACGATGCATGGAGGGATCGTTGCTTGAATGGATTGGGTACACCTTACCACATACCTCTATCCTGTCAATGGAAATTGTTGATTGCCCATCTATGAACATTATCCTAGACTGTTGCTACAGTTTCCTTCAAACTTTGATCATCATCGGTAGTTGTGACTCTCTAAGGACCTTTCCACTGAGTTTCTTCAAAAAACTTGATTATATGGTATTCCGAGGGTGTAGGAATCTTGAACTGATTACACAGGACTATAAGCTTGATTATAGCCTTGTGTATATGTCAATTACAGAATGCCCAAATTTTGTATCTTTTCCCGAGGGAGGATTCTCTGCACCCAGTCTGAAGAATTTTGATATTTGTAGATTGCAGAATTTAAAATCATTGCCAGAATGTATGCACACTCTCTTTCCATCTCTTACAAGCCTAACTATTGACGATTGTCCACAATTGGAGGTGTTCTCTAATGGAGGTTTGCCACCAAGCCTAAAATCCATGGTACTCTACGGATGCTCCAATCTTCTTCTGTCCTCACTGAAATGGGCTTTGGGAATCAACACTTCTCTAAAACGTCTGCATATTGGAAATGTGGATGTGGAGTCTTTTCCCGATCAAGGGTTGCTTCCACGCTCTCTTACTTCTCTCAGGATTGATGATTGTGTAAATCTTAAAAAACTGGACCACAAAGGTCTCTGCCACCTCTCCTCTCTTGAAGATTTGATTCTTAGTGGTTGCCCCAGCCTTCAATGCTTACCAGTGGAGGGACTGCCTAAAACCATTTCAGCTCTACAAGTTACGGATTGTTTGTTGCTTAAACAGCGATGCATGAAACCTAATGGTGAAGATTGGGGGAAGATTTCTCACATTCAATGTGTGGATCTCAAAGATGATTTTTCCTTTGAACCGCATTTTTTGAAGTACCTTTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein | Disease resistance protein [Medicago truncatula]. | MAVEFVGGALLSAFLQVTFEKLASAEIGDYFRRTKLNHNLLKKLNITLLSIDAVVDDAELKQIRNPNVRAWLDAVKDAVLDAEDLLEEIDFEVSKSKLEAESQSTTNKVWNFFNASSSSFDKEIETKMQEVLDNLEYLSSKKDILDLKKSTSSFDVGSGSQVSQKLPSTSLPVDSIIYGRDVDKEVIYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEKVASIMRSNKMLQLDQLEEEHCWKLFAKHACQDEDPQLNHEFKDIAKRIITKCQGLPLALKTIGSLLYTKSSLVEWKIILSSKIWDLPEEENNIIPALMLSYHHLPSHLKRCFAYCALFPKNYVFKKEHLILLWMAENFLQCSRQSMSMEEVGEQYFNDLFSRSFFQQSRRYKMQFIMHDLLNDLAKCVSGDFSFTFEAEESNNLLNTTRHFSFTKNPCKGSKIFETLHNAYKSRTFLPLDMTSYGIPSQYRISSTVMQELFSKFKFFRVLSFSSCSFEKELPDTIGNLKHLRYLDLSGNYSIKKLPDSVCYLYNLQTLKLRHCWGLEELPLNLHKLTNLRYLDFSGTKVRKMPTAMGKLKHLQVLSSFYVDKGSEANIQQLGELNLHETLSILALQNIDNPSDASAANLINKVHLVKLELEWNANSDNSEKERVVLEKLQPSKHLKELSIRSYGGTQFPSWFGDNSLSNVVSLKLSSCKNCVLLPPLGILPSLKELEIEELSGLVVIGSEFYGNGSGSSSVIIPFASLQTLQFKDMGEWEEWDCKIVSGAFPCLQALSIDNCPNLKECLPVNLPSLTKLRIYFCARLTSSVSWGTSIQDLHITNCGKLQFDKQLTSLKFLSIGGRCMEGSLLEWIGYTLPHTSILSMEIVDCPSMNIILDCCYSFLQTLIIIGSCDSLRTFPLSFFKKLDYMVFRGCRNLELITQDYKLDYSLVYMSITECPNFVSFPEGGFSAPSLKNFDICRLQNLKSLPECMHTLFPSLTSLTIDDCPQLEVFSNGGLPPSLKSMVLYGCSNLLLSSLKWALGINTSLKRLHIGNVDVESFPDQGLLPRSLTSLRIDDCVNLKKLDHKGLCHLSSLEDLILSGCPSLQCLPVEGLPKTISALQVTDCLLLKQRCMKPNGEDWGKISHIQCVDLKDDFSFEPHFLKYL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF236 | 9-909 | PTHR23155:SF236,DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) | ALLSAFLQVTFEKLASAEIGDYFRRTKLNHNLLKKLNITLLSIDAVVDDAELKQIRNPNVRAWLDAVKDAVLDAEDLLEEIDFEVSKSKLEAESQSTTNKVWNFFNASSSSFDKEIETKMQEVLDNLEYLSSKKDILDLKKSTSSFDVGSGSQVSQKLPSTSLPVDSIIYGRDVDKEVIYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEKVASIMRSNKMLQLDQLEEEHCWKLFAKHACQDEDPQLNHEFKDIAKRIITKCQGLPLALKTIGSLLYTKSSLVEWKIILSSKIWDLPEEENNIIPALMLSYHHLPSHLKRCFAYCALFPKNYVFKKEHLILLWMAENFLQCSRQSMSMEEVGEQYFNDLFSRSFFQQSRRYKMQFIMHDLLNDLAKCVSGDFSFTFEAEESNNLLNTTRHFSFTKNPCKGSKIFETLHNAYKSRTFLPLDMTSYGIPSQYRISSTVMQELFSKFKFFRVLSFSSCSFEKELPDTIGNLKHLRYLDLSGNYSIKKLPDSVCYLYNLQTLKLRHCWGLEELPLNLHKLTNLRYLDFSGTKVRKMPTAMGKLKHLQVLSSFYVDKGSEANIQQLGELNLHETLSILALQNIDNPSDASAANLINKVHLVKLELEWNANSDNSEKERVVLEKLQPSKHLKELSIRSYGGTQFPSWFGDNSLSNVVSLKLSSCKNCVLLPPLGILPSLKELEIEELSGLVVIGSEFYGNGSGSSSVIIPFASLQTLQFKDMGEWEEWDCKIVSGAFPCLQALSIDNCPNLKECLPVNLPSLTKLRIYFCARL |
| HMMPanther: PTHR23155 | 9-909 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | ALLSAFLQVTFEKLASAEIGDYFRRTKLNHNLLKKLNITLLSIDAVVDDAELKQIRNPNVRAWLDAVKDAVLDAEDLLEEIDFEVSKSKLEAESQSTTNKVWNFFNASSSSFDKEIETKMQEVLDNLEYLSSKKDILDLKKSTSSFDVGSGSQVSQKLPSTSLPVDSIIYGRDVDKEVIYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEKVASIMRSNKMLQLDQLEEEHCWKLFAKHACQDEDPQLNHEFKDIAKRIITKCQGLPLALKTIGSLLYTKSSLVEWKIILSSKIWDLPEEENNIIPALMLSYHHLPSHLKRCFAYCALFPKNYVFKKEHLILLWMAENFLQCSRQSMSMEEVGEQYFNDLFSRSFFQQSRRYKMQFIMHDLLNDLAKCVSGDFSFTFEAEESNNLLNTTRHFSFTKNPCKGSKIFETLHNAYKSRTFLPLDMTSYGIPSQYRISSTVMQELFSKFKFFRVLSFSSCSFEKELPDTIGNLKHLRYLDLSGNYSIKKLPDSVCYLYNLQTLKLRHCWGLEELPLNLHKLTNLRYLDFSGTKVRKMPTAMGKLKHLQVLSSFYVDKGSEANIQQLGELNLHETLSILALQNIDNPSDASAANLINKVHLVKLELEWNANSDNSEKERVVLEKLQPSKHLKELSIRSYGGTQFPSWFGDNSLSNVVSLKLSSCKNCVLLPPLGILPSLKELEIEELSGLVVIGSEFYGNGSGSSSVIIPFASLQTLQFKDMGEWEEWDCKIVSGAFPCLQALSIDNCPNLKECLPVNLPSLTKLRIYFCARL |
| superfamily: SSF52540 | 160-411 | SSF52540 | SQVSQKLPSTSLPVDSIIYGRDVDKEVIYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEKVASIMRSNKMLQLDQLEEEHCWKLFAKHACQDEDPQLNHEFKDIAKRIITKCQGLPLALKTIGSLLYTKSSLVEWKIILSSKIWDLPEE |
| Gene3D: G3DSA:3.40.50.300 | 179-322 | G3DSA:3.40.50.300 | GRDVDKEVIYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEK |
| HMMPfam: PF00931 IPR002182
|
187-464 | NB-ARC,NBS NB-ARC
|
IYDWLKSDPDNANHQLSIVSIVGMGGMGKTTLAQHLYNDPKMKETFDVKAWVCVSEEFDVFKVTRSILEGITGSTDDSRDLNMVQERLKEKLTGKIFLLVLDDLWNEKRDKWMTLQTPFNYAAHGSKILVTTRSEKVASIMRSNKMLQLDQLEEEHCWKLFAKHACQDEDPQLNHEFKDIAKRIITKCQGLPLALKTIGSLLYTKSSLVEWKIILSSKIWDLPEEENNIIPALMLSYHHLPSHLKRCFAYCALFPKNYVFKKEHLILLWMAENFLQCS |
| FPrintScan: PR00364 IPR000767
|
204-219 | DISEASERSIST Disease resistance protein
|
IVSIVGMGGMGKTTLA |
| FPrintScan: PR00364 IPR000767
|
277-291 | DISEASERSIST Disease resistance protein
|
KLTGKIFLLVLDDLW |
| FPrintScan: PR00364 IPR000767
|
374-388 | DISEASERSIST Disease resistance protein
|
CQGLPLALKTIGSLL |
| superfamily: SSF52058 | 498-944 | SSF52058,LRR | IMHDLLNDLAKCVSGDFSFTFEAEESNNLLNTTRHFSFTKNPCKGSKIFETLHNAYKSRTFLPLDMTSYGIPSQYRISSTVMQELFSKFKFFRVLSFSSCSFEKELPDTIGNLKHLRYLDLSGNYSIKKLPDSVCYLYNLQTLKLRHCWGLEELPLNLHKLTNLRYLDFSGTKVRKMPTAMGKLKHLQVLSSFYVDKGSEANIQQLGELNLHETLSILALQNIDNPSDASAANLINKVHLVKLELEWNANSDNSEKERVVLEKLQPSKHLKELSIRSYGGTQFPSWFGDNSLSNVVSLKLSSCKNCVLLPPLGILPSLKELEIEELSGLVVIGSEFYGNGSGSSSVIIPFASLQTLQFKDMGEWEEWDCKIVSGAFPCLQALSIDNCPNLKECLPVNLPSLTKLRIYFCARLTSSVSWGTSIQDLHITNCGKLQFDKQLTSLKFLSI |
| Gene3D: G3DSA:3.80.10.10 | 571-773 | G3DSA:3.80.10.10 | QYRISSTVMQELFSKFKFFRVLSFSSCSFEKELPDTIGNLKHLRYLDLSGNYSIKKLPDSVCYLYNLQTLKLRHCWGLEELPLNLHKLTNLRYLDFSGTKVRKMPTAMGKLKHLQVLSSFYVDKGSEANIQQLGELNLHETLSILALQNIDNPSDASAANLINKVHLVKLELEWNANSDNSEKERVVLEKLQPSKHLKELSIR |
| FPrintScan: PR00364 IPR000767
|
608-624 | DISEASERSIST Disease resistance protein
|
GNLKHLRYLDLSGNYSI |
| HMMPfam: PF00560 IPR001611
|
612-631 | LRR_1 Leucine-rich repeat
|
HLRYLDLSGNYSIKKLPDSV |
| ProfileScan: PS51450 IPR001611
|
612-634 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLRYLDLSGNYSIKKLPDSVCYL |
| ProfileScan: PS51450 IPR001611
|
636-659 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLQTLKLRHCWGLEELPLNLHKLT |
| ProfileScan: PS51450 IPR001611
|
660-681 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLRYLDFSGTKVRKMPTAMGKL |
| Gene3D: G3DSA:3.80.10.10 | 788-1002 | G3DSA:3.80.10.10 | SLSNVVSLKLSSCKNCVLLPPLGILPSLKELEIEELSGLVVIGSEFYGNGSGSSSVIIPFASLQTLQFKDMGEWEEWDCKIVSGAFPCLQALSIDNCPNLKECLPVNLPSLTKLRIYFCARLTSSVSWGTSIQDLHITNCGKLQFDKQLTSLKFLSIGGRCMEGSLLEWIGYTLPHTSILSMEIVDCPSMNIILDCCYSFLQTLIIIGSCDSLRT |
| superfamily: SSF52058 | 988-1232 | SSF52058,LRR | LQTLIIIGSCDSLRTFPLSFFKKLDYMVFRGCRNLELITQDYKLDYSLVYMSITECPNFVSFPEGGFSAPSLKNFDICRLQNLKSLPECMHTLFPSLTSLTIDDCPQLEVFSNGGLPPSLKSMVLYGCSNLLLSSLKWALGINTSLKRLHIGNVDVESFPDQGLLPRSLTSLRIDDCVNLKKLDHKGLCHLSSLEDLILSGCPSLQCLPVEGLPKTISALQVTDCLLLKQRCMKPNGEDWGKISH |
| Gene3D: G3DSA:3.80.10.10 | 1033-1208 | G3DSA:3.80.10.10 | YSLVYMSITECPNFVSFPEGGFSAPSLKNFDICRLQNLKSLPECMHTLFPSLTSLTIDDCPQLEVFSNGGLPPSLKSMVLYGCSNLLLSSLKWALGINTSLKRLHIGNVDVESFPDQGLLPRSLTSLRIDDCVNLKKLDHKGLCHLSSLEDLILSGCPSLQCLPVEGLPKTISALQ |
| ProfileScan: PS51450 IPR001611
|
1132-1153 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLKRLHIGNVDVESFPDQGLLP |
List of Contributions
There has not been any contribution yet.
