PRGDB00044662 (Disease resistance protein; Aminoacyl-tRNA synthetase, class 1a, anticodon-binding)

Disease resistance protein; Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	62910037 (AC158497)
Gene Class	NL
Domain Type	NBS, LRR, Others
Gene Species	Medicago truncatula
	Comment?

Medicago truncatula chromosome 2 clone mth2-48e18, complete sequence.

DNA Sequence

ATGGCAGTGGCGGCTGTAGGTGAAGCATTTCTGTCTGCTTTCATTGAAGTTGTCCTCGACAGGCTCGCTTCTCCTGAGGTTGTTGTCTTGATCCGTGGGAAGAAAGTTGACGTCAATTTGGTCCAAAGGTTGAAGAACACTCTTTATGCTGTGGAAGCTGTGTTTAACGATGCGGAGCAAAAACAGTTCAAAAACCCTGCTATTAACAGATGGATCGATGATCTCAAAGGTGTTGTCTATGTAGCTGATGACCTTCTTGACAACATTTCAACCAAAGCTGCTACACAGAAAAACAAGCAGGTGAGTACTGCTAATTATTTATCTCGCTTTTTCAACTTTGAAGAAAGGGACATGCTTTGTAAGCTGGAAAATATAGTTGCTAAACTTGAATCCATTCTCAAATTCAAAGATATTCTTGGTCTTCAACATATTGCAATCGAACACCACTCTTCTTGGAGAACTTCATCAACCTCTCTAGATGACCCATCTAACATATTTGGTAGGGATGCAGACAAAAAGGCCATACTCAAATTACTGTTAGATGATGATGATTGCTGTAAGACTTGCGTGATCCCCATAGTTGGTATGGGTGGTGTGGGAAAAACAATTTTAGCCCAATCTGTGTACAACCATGACAGTATAAAGCAGAAGTTTGATGTTCAAGCATGGGCTTGTGCCTCGGATCATTTCGATGAATTTAATGTTACAAAGGCCATATTGGAGTCTGTTACAGGGAATGCTTGTAGCATAAACAGCAACGAGTTGCTTCATCGTGATTTGAAGGAAAAACTGACTGGAAAAAAGTTCTTAATTGTTTTGGATGATGTATGGACCGAGGATTATGACAGCTGGAATTCTCTTTTAAGGCCTCTTCAATACGGGGCTAAGGGAAATAAAATTCTTGTAACAACTCGTATTGAAAAAGTTGCTTCTATGGTCCAAACTTTTCAAGGTTAA

Protein sequences

Name	Description	Sequence
Disease resistance protein; Aminoacyl-tRNA synthetase, class 1a, anticodon-binding	Disease resistance protein; Aminoacyl-tRNA synthetase, class 1a, anticodon-binding [Medicago truncatula].	MAVAAVGEAFLSAFIEVVLDRLASPEVVVLIRGKKVDVNLVQRLKNTLYAVEAVFNDAEQKQFKNPAINRWIDDLKGVVYVADDLLDNISTKAATQKNKQVSTANYLSRFFNFEERDMLCKLENIVAKLESILKFKDILGLQHIAIEHHSSWRTSSTSLDDPSNIFGRDADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTRIEKVASMVQTFQG

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR23155:SF236	9-306	PTHR23155:SF236,DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS)	AFLSAFIEVVLDRLASPEVVVLIRGKKVDVNLVQRLKNTLYAVEAVFNDAEQKQFKNPAINRWIDDLKGVVYVADDLLDNISTKAATQKNKQVSTANYLSRFFNFEERDMLCKLENIVAKLESILKFKDILGLQHIAIEHHSSWRTSSTSLDDPSNIFGRDADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTRI
HMMPanther: PTHR23155	9-306	PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	AFLSAFIEVVLDRLASPEVVVLIRGKKVDVNLVQRLKNTLYAVEAVFNDAEQKQFKNPAINRWIDDLKGVVYVADDLLDNISTKAATQKNKQVSTANYLSRFFNFEERDMLCKLENIVAKLESILKFKDILGLQHIAIEHHSSWRTSSTSLDDPSNIFGRDADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTRI
superfamily: SSF52540	148-313	SSF52540	HHSSWRTSSTSLDDPSNIFGRDADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTRIEKVASMV
Gene3D: G3DSA:3.40.50.300	167-305	G3DSA:3.40.50.300	GRDADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTR
HMMPfam: PF00931 IPR002182	170-314	NB-ARC,NBS NB-ARC	ADKKAILKLLLDDDDCCKTCVIPIVGMGGVGKTILAQSVYNHDSIKQKFDVQAWACASDHFDEFNVTKAILESVTGNACSINSNELLHRDLKEKLTGKKFLIVLDDVWTEDYDSWNSLLRPLQYGAKGNKILVTTRIEKVASMVQ
FPrintScan: PR00364 IPR000767	190-205	DISEASERSIST Disease resistance protein	VIPIVGMGGVGKTILA
FPrintScan: PR00364 IPR000767	263-277	DISEASERSIST Disease resistance protein	KLTGKKFLIVLDDVW

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Analyses

Blast

Blast matches against Reference R-Genes. Show