PRGDB00044664 (Disease resistance protein)
| Disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 59858724 (AC157473) |
| Gene Class | NL |
| Domain Type | LRR, NBS, LRR, Others |
| Gene Species | Medicago truncatula |
DNA Sequence
ATGGCAGAATCATTTCTCTTTAGCCTTGCTGAATCATTTATCACCAAGGTTGCTTCTCGTGCTGTTGAAGAAGCTTCATTGGCACTCGGCGTCTATGATGATCTACGAGAGATTAAAAACACTGTGTCACTCATCAAAGCAGTGCTCTTGGATGCTGAGTTAAAGCAGAAGCAGAATCACGAGCTTCGTGAATGGCTGCAACAGATCAAACGTGTCTTCTACGATGCAGAAGATGTAATCAATGATTTTGAGTGCGAGGCATTGCGAAAGCACGTAGTCAACACTTCTGGTAGCATCAGAAGGAAGGTACGACGTTACTTATCCAGTTCTAATCCTCTTGTTTATCGCCTTAAAATGGCACATCAAATCAAACATATTAATAAGAGATTGAATAAGAACGCTGCTGCTAGGCATAATTTTGGCCTTCAAATCAATGATAGCGATAATCATGTTGTAAAAAGGCGGGAGTTGACTCATTCGCATGTAGTTGATTCTGATGTGATAGGAAGGGATTACGATAAGCAAAAAATTATTGATCTCTTATTGCAAGATAGTGGTCATAAAAGTCTCTCTGTTATTCCTATTGTTGGAATTGGAGGCTTGGGAAAGACTACACTTGCAAAGACGGTGTTCAATGATAAGAGTTTAGACGAGACTTTCCCATTAAAGATGTGGGTGTGTGTCTCCGATGATTTTGAACTTCAGCATCTGCTCATTAAAATCCTCAATTCAGCTAGCGTTAGTGATGCCACTCCTAACCTCATTCACGAAGAGAACATTAAAAACCTTGATGTGCAGCAGCTACAAACTCATTTGAGAAACACACTTGCTGGCAAAAAATTCTTGCTTGTCTTGGATGACGTGTGGAGCGAGGATCGTGTCAAATGGATAGAGGTGAAGAATCTATTACAAGTAGGAGATGAAGGAAGTAAAGTTTTAGTGACTACACGTAGTCACTCAATTGCTAAAATGATGTGCACAAACACATCTTACACTTTGCAAGGTCTTTCTAGAGAGGATTCCTTGTCTGTATTTGTCAAATGGGCATTTAAAGAGGGAGAAGAGAAAAAATATCCAAAATTGATAGAGATTGGGAAAGAAATTGTTCAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATTGGGGAGTTTATTGTTCTTAAAAGATGATATAGAAGAGTGGAAGTTTGTTAGGGACAATGAGATTTGGAATTTACCACAAAAAGAAGATGATATTTTGCCTGCTATCAAATTAAGTTTTGATCAATTACCATCTTATTTAAAACGATGTTTTGCCTGCTTCTCCCTCTTCGAAAAAGACTTCAAATTTGTTACTTATACTGTCACTGTGCTTTGGGAGGCTCTTGATTTTCTTCCATCACCAAACAAGGGTAAAACCTTGGAAGATGTCGGTAATCAATTTTTGCACGAGCTACAATCAAGATCTTTCCTTCAAGATTTCTATGTCTCTGGTAATGTTTGTGTATTTAAATTGCATGATTTAGTGCATGATCTTGCCCTATATGTTGCCAGAGATGAGTTTCAATTGCTGAAACTCCATAATGAAAATATAATTAAGAATGTTCTCCATTTGTCATTTACTACAAATGATTTACTTGGACAAACACCAATTCCCGCAGGACTGAGAACCATACTTTTTCCATTAGAAGCCAACAATGTAGCTTTTTTGAACAATTTGGCATCAAGGTGTAAATTCTTGCGAGTTTTGCGGTTAACTCATTCTACATATGAGAGTTTGCCCCGCTCAATTGGTAAATTAAAACATTTGAGATATCTCAATCTTAAGGGAAATAAAGAATTGAAGAGCCTCCCTGATTCAGTGTGCAAACTTCAGAATTTGCAAACTTTGATTCTTGAGGGATGCTTAAAGCTTGAAAAATTACCCAATGGGATAGGAAATTTGATCAGCCTTCGACAACTACATATAACCACAATGCAATCTAGTTTTCCAGACAAAGAGATTGCCAAATTGACTTATCTAGAGTTCTTATCTATCTGTTCTTGTGACAATTTGGAGTCATTGCTTGGAGAATTAGAACTACCTAATCTTAAATCGTTGAGTATTATTTATTGTGGGAATATAACATCTTTGCCACTCCAGCTTATTCCAAATGTGGATAGTTTGATGATTAGTAATTGCAATAAGTTGAAATTGTCTTTGGGCCATGAGAATGCAATTCCCAAGTTAAGGCTCAAGTTACTGTATATTGAATCCTTGCCAGAATTGTTGAGTTTTCCTCAATGGTTGCAAGGATGTGCGGACACATTACACAGCTTATTTATTGGTCACTGTGAAAATCTTGAGAAACTTCCTGAGTGGTCATCAACTTTCATTTGTCTAAATACACTTACAATTAGAAATTGCCCGAAACTACTTTCACTCCCTGATGATGTGCATTGCCTCCCAAACCTTGAATGCTTAGAAATGAAAGATTGTCCTGAATTATGTAAAAGATACCAGCCAAAGGTAGGACATGATTGGCCCAAGATTTCACACATCAAACGAGTTAACATTAAATCATCAGAACATGAAAATTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein | Disease resistance protein [Medicago truncatula]. | MAESFLFSLAESFITKVASRAVEEASLALGVYDDLREIKNTVSLIKAVLLDAELKQKQNHELREWLQQIKRVFYDAEDVINDFECEALRKHVVNTSGSIRRKVRRYLSSSNPLVYRLKMAHQIKHINKRLNKNAAARHNFGLQINDSDNHVVKRRELTHSHVVDSDVIGRDYDKQKIIDLLLQDSGHKSLSVIPIVGIGGLGKTTLAKTVFNDKSLDETFPLKMWVCVSDDFELQHLLIKILNSASVSDATPNLIHEENIKNLDVQQLQTHLRNTLAGKKFLLVLDDVWSEDRVKWIEVKNLLQVGDEGSKVLVTTRSHSIAKMMCTNTSYTLQGLSREDSLSVFVKWAFKEGEEKKYPKLIEIGKEIVQKCGGLPLALRTLGSLLFLKDDIEEWKFVRDNEIWNLPQKEDDILPAIKLSFDQLPSYLKRCFACFSLFEKDFKFVTYTVTVLWEALDFLPSPNKGKTLEDVGNQFLHELQSRSFLQDFYVSGNVCVFKLHDLVHDLALYVARDEFQLLKLHNENIIKNVLHLSFTTNDLLGQTPIPAGLRTILFPLEANNVAFLNNLASRCKFLRVLRLTHSTYESLPRSIGKLKHLRYLNLKGNKELKSLPDSVCKLQNLQTLILEGCLKLEKLPNGIGNLISLRQLHITTMQSSFPDKEIAKLTYLEFLSICSCDNLESLLGELELPNLKSLSIIYCGNITSLPLQLIPNVDSLMISNCNKLKLSLGHENAIPKLRLKLLYIESLPELLSFPQWLQGCADTLHSLFIGHCENLEKLPEWSSTFICLNTLTIRNCPKLLSLPDDVHCLPNLECLEMKDCPELCKRYQPKVGHDWPKISHIKRVNIKSSEHEN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 150-409 | SSF52540 | HVVKRRELTHSHVVDSDVIGRDYDKQKIIDLLLQDSGHKSLSVIPIVGIGGLGKTTLAKTVFNDKSLDETFPLKMWVCVSDDFELQHLLIKILNSASVSDATPNLIHEENIKNLDVQQLQTHLRNTLAGKKFLLVLDDVWSEDRVKWIEVKNLLQVGDEGSKVLVTTRSHSIAKMMCTNTSYTLQGLSREDSLSVFVKWAFKEGEEKKYPKLIEIGKEIVQKCGGLPLALRTLGSLLFLKDDIEEWKFVRDNEIWNLPQK |
| Gene3D: G3DSA:3.40.50.300 | 168-326 | G3DSA:3.40.50.300 | IGRDYDKQKIIDLLLQDSGHKSLSVIPIVGIGGLGKTTLAKTVFNDKSLDETFPLKMWVCVSDDFELQHLLIKILNSASVSDATPNLIHEENIKNLDVQQLQTHLRNTLAGKKFLLVLDDVWSEDRVKWIEVKNLLQVGDEGSKVLVTTRSHSIAKMMC |
| HMMPfam: PF00931 IPR002182
|
171-460 | NB-ARC,NBS NB-ARC
|
DYDKQKIIDLLLQDSGHKSLSVIPIVGIGGLGKTTLAKTVFNDKSLDETFPLKMWVCVSDDFELQHLLIKILNSASVSDATPNLIHEENIKNLDVQQLQTHLRNTLAGKKFLLVLDDVWSEDRVKWIEVKNLLQVGDEGSKVLVTTRSHSIAKMMCTNTSYTLQGLSREDSLSVFVKWAFKEGEEKKYPKLIEIGKEIVQKCGGLPLALRTLGSLLFLKDDIEEWKFVRDNEIWNLPQKEDDILPAIKLSFDQLPSYLKRCFACFSLFEKDFKFVTYTVTVLWEALDFLP |
| FPrintScan: PR00364 IPR000767
|
192-207 | DISEASERSIST Disease resistance protein
|
VIPIVGIGGLGKTTLA |
| FPrintScan: PR00364 IPR000767
|
275-289 | DISEASERSIST Disease resistance protein
|
TLAGKKFLLVLDDVW |
| FPrintScan: PR00364 IPR000767
|
372-386 | DISEASERSIST Disease resistance protein
|
CGGLPLALRTLGSLL |
| superfamily: SSF52058 | 482-840 | SSF52058,LRR | RSFLQDFYVSGNVCVFKLHDLVHDLALYVARDEFQLLKLHNENIIKNVLHLSFTTNDLLGQTPIPAGLRTILFPLEANNVAFLNNLASRCKFLRVLRLTHSTYESLPRSIGKLKHLRYLNLKGNKELKSLPDSVCKLQNLQTLILEGCLKLEKLPNGIGNLISLRQLHITTMQSSFPDKEIAKLTYLEFLSICSCDNLESLLGELELPNLKSLSIIYCGNITSLPLQLIPNVDSLMISNCNKLKLSLGHENAIPKLRLKLLYIESLPELLSFPQWLQGCADTLHSLFIGHCENLEKLPEWSSTFICLNTLTIRNCPKLLSLPDDVHCLPNLECLEMKDCPELCKRYQPKVGHDWPKISH |
| Gene3D: G3DSA:3.80.10.10 | 568-825 | G3DSA:3.80.10.10 | ASRCKFLRVLRLTHSTYESLPRSIGKLKHLRYLNLKGNKELKSLPDSVCKLQNLQTLILEGCLKLEKLPNGIGNLISLRQLHITTMQSSFPDKEIAKLTYLEFLSICSCDNLESLLGELELPNLKSLSIIYCGNITSLPLQLIPNVDSLMISNCNKLKLSLGHENAIPKLRLKLLYIESLPELLSFPQWLQGCADTLHSLFIGHCENLEKLPEWSSTFICLNTLTIRNCPKLLSLPDDVHCLPNLECLEMKDCPELCK |
| HMMPfam: PF13855 | 574-629 | LRR_8,Leucine rich repeat | LRVLRLTHSTYESLPRSIGKLKHLRYLNLKGNKELKSLPDSVCKLQNLQTLILEGC |
| FPrintScan: PR00364 IPR000767
|
592-608 | DISEASERSIST Disease resistance protein
|
GKLKHLRYLNLKGNKEL |
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