PRGDB00044665 (Disease resistance protein)
| Disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 60361022 (AC155891) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Medicago truncatula |
DNA Sequence
ATGAAGCCACTTCGGTTGATCTGGAGCGAATCAGCCTGGATTGAAGACATTAACAAAGCTGTATTAAAAACGTTAAGATACAAGTACAAAAATGAACTTACATTTAATTTCAAAACCGATGAAAATTATAGTAAAATTCAATCTTCAATAAACTTTGATTCTAGCAAAGTTCAAATCATTGGAATTTGGGGTGCAAAAGGCATAGGTAAGACAGCCATTGTTGCTGCTATGTTTCAAAATTTCTCTTGCAAATATCAAGGTACCTGCTTCTTAGAAAAGGTGGCAGAAGAATCAAAAAGGAATGGAATCAATTTCACTTATAAAAAACTTGTTTCCACATTACTCGGGGAAGATGTTAATATCGACACGCCTATAGTAATGTCATCCATGGTCATTAGAAGACTCAAAGGAATGAAAGCTTTCATTGTACTAGATGATGTTCGTAGTCCAGAAACTCTGAAAACTTTGATTAGAGAGAGAGGTGGTTGGCTAGGAGCTGGTAGCATAGTCATTGTGACTACTAGGGATGAGGATGTGCTGAAAAGTGGAGGAATTAGCAACACTCATAAAGTCCGAAATTCCCTCCGGATTTCCTACTTGAATAAGTTTACCATTTCCTTACCTAAGCAGGGATTTTTGGAGCTTTCAAGAAAAGCAATTCATTATGTCAATTGCAACCCTATAGCTTTGAAAGTTTTGAGATCATTTCATCGACTTTACACAAGTGAAATCGACTGGAAATGTGCACTAGCAAAACTAAAGGAAATCTCCAATGCCAAAATAATGAGATGGACTTATAAATTTCAGATTTGGGGAACAGGACAAGTTTGGGCACTCTTTCAGGCTTACAGATCAATGAAGGTCATGTTTGGACATTCTGTGAGGCTTATAGAGAAATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Disease resistance protein | Disease resistance protein [Medicago truncatula]. | MKPLRLIWSESAWIEDINKAVLKTLRYKYKNELTFNFKTDENYSKIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLKSGGISNTHKVRNSLRISYLNKFTISLPKQGFLELSRKAIHYVNCNPIALKVLRSFHRLYTSEIDWKCALAKLKEISNAKIMRWTYKFQIWGTGQVWALFQAYRSMKVMFGHSVRLIEK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017:SF20 | 4-263 | PTHR11017:SF20,SUBFAMILY NOT NAMED | LRLIWSESAWIEDINKAVLKTLRYKYKNELTFNFKTDENYSKIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLKSGGISNTHKVRNSLRISYLNKFTISLPKQGFLELSRKAIHYVNCNPIALKVLRSFHRLYTSEIDWKCALAKLKEISNAKIMR |
| HMMPanther: PTHR11017 | 4-263 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LRLIWSESAWIEDINKAVLKTLRYKYKNELTFNFKTDENYSKIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLKSGGISNTHKVRNSLRISYLNKFTISLPKQGFLELSRKAIHYVNCNPIALKVLRSFHRLYTSEIDWKCALAKLKEISNAKIMR |
| Gene3D: G3DSA:3.40.50.300 | 25-181 | G3DSA:3.40.50.300 | LRYKYKNELTFNFKTDENYSKIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLK |
| superfamily: SSF52540 | 30-261 | SSF52540 | KNELTFNFKTDENYSKIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLKSGGISNTHKVRNSLRISYLNKFTISLPKQGFLELSRKAIHYVNCNPIALKVLRSFHRLYTSEIDWKCALAKLKEISNAKI |
| HMMPfam: PF00931 IPR002182
|
45-255 | NB-ARC,NBS NB-ARC
|
KIQSSINFDSSKVQIIGIWGAKGIGKTAIVAAMFQNFSCKYQGTCFLEKVAEESKRNGINFTYKKLVSTLLGEDVNIDTPIVMSSMVIRRLKGMKAFIVLDDVRSPETLKTLIRERGGWLGAGSIVIVTTRDEDVLKSGGISNTHKVRNSLRISYLNKFTISLPKQGFLELSRKAIHYVNCNPIALKVLRSFHRLYTSEIDWKCALAKLKE |
| FPrintScan: PR00364 IPR000767
|
59-74 | DISEASERSIST Disease resistance protein
|
IIGIWGAKGIGKTAIV |
| FPrintScan: PR00364 IPR000767
|
134-148 | DISEASERSIST Disease resistance protein
|
RLKGMKAFIVLDDVR |
| FPrintScan: PR00364 IPR000767
|
223-237 | DISEASERSIST Disease resistance protein
|
VNCNPIALKVLRSFH |
List of Contributions
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