PRGDB00044671 (disease resistance protein)
| disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 4757407 (AB026651) |
| Gene Class | CNL |
| Domain Type | LRR, NBS, LRR, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGCTGGGCTGGCTTGTAATACCCTGGAATCAAATCTTCACTGCTGCATGTGGCTGCTTTCTAAGCGATAGAAACTACATTCACATGATGGAGTCAAATCTCGATGCTCTGCAGAAAACTATGGAAGAACTTAAGAATGGACGAGATGACCTGTTAGGAAGAGTTTCCATAGAAGAAGATAAAGGTTTGCAACGACTTGCTCAAGTCAATGGATGGCTTTCCAGGGTACAAATTGTTGAATCCGAATTCAAGGATCTGCTTGAGGCTATGTCAATCGAAACCGGAAGATTGTGTTTGTTGGGATATTGCTCTGAGGATTGCATATCAAGCTACAATTATGGTGAAAAGGTATCGAAGATGTTGGAAGAAGTTAAAGAACTTCTATCTAAAAAAGATTTTAGAATGGTCGCGCAGGAAATTATACATAAGGTGGAGAAGAAGCTTATCCAAACCACAGTTGGTTTGGATAAACTGGTGGAAATGGCGTGGAGCAGCCTGATGAACGATGAAATAGGAACCTTGGGACTTTATGGTATGGGGGGAGTAGGAAAAACCACCCTCTTAGAAAGTCTCAACAACAAATTTGTTGAACTGGAGAGTGAATTTGATGTAGTGATATGGGTTGTGGTATCTAAAGACTTTCAGTTCGAGGGCATTCAAGATCAGATTCTGGGAAGATTACGTTCTGACAAGGAATGGGAAAGAGAAACAGAAAGTAAGAAAGCCTCTCTCATATACAATAACCTTGAGAGAAAGAAATTTGTGTTGTTGTTGGATGATCTCTGGAGTGAAGTAGATATGACTAAGATAGGAGTTCCACCTCCAACTCGAGAAAATGGATCGAAGATTGTTTTCACCACTCGTTCAACGGAAGTTTGCAAGCACATGAAAGCTGACAAGCAGATAAAAGTTGCTTGTTTGTCCCCAGATGAAGCGTGGGAATTGTTTCGACTTACTGTTGGAGATATCATATTAAGGAGCCATCAAGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATGCCATGGCTTGCCACTTGCACTCAATGTCATTGGCAAAGCCATGTCATGTAAAGAAACTATACAAGAATGGTCTCATGCGATTAATGTTCTGAATTCGGCTGGCCACGAGTTTCCAGGTATGGAAGAAAGAATTCTTCCCATTTTGAAGTTCAGTTATGATAGCTTGAAGAATGGTGAAATCAAATTGTGCTTCCTATATTGTTCTCTGTTTCCTGAAGATTCTGAAATACCGAAGGAGAAGTGGATAGAATACTGGATATGCGAAGGATTTATAAATCCAAACAGATATGAAGATGGAGGTACCAACCATGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAATGTGAACTCACAGACAACGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAATTCTGACTTCGGAAAACAACAAGAAACAATCTGTGTGAAATCTGGTGCTCATGTACGTATGATACCGAATGACATCAATTGGGAGATTGTGAGAACGATGTCTTTTACTTGTACTCAGATTAAGAAGATATCTTGTCGTTCCAAATGCCCCAACCTTTCAACCCTTTTAATCCTAGATAACAGGTTGTTGGTGAAAATTTCAAATAGATTCTTTCGGTTTATGCCAAAACTTGTGGTCTTGGATCTTTCTGCAAACCTCGATCTTATTAAATTGCCGGAAGAAATTTCTAACCTAGGTTCCCTGCAATATCTCAATATATCACTCACAGGGATAAAATCGCTACCAGTTGGTCTGAAGAAGTTGAGGAAACTAATCTACTTGAATCTGGAGTTCACTGGTGTACATGGGAGTCTTGTTGGGATAGCAGCAACCTTACCAAATCTGCAAGTGTTGAAATTCTTTTATTCCTGTGTTTATGTTGATGACATATTAATGAAGGAATTACAAGACTTGGAGCACTTGAAGATTTTAACAGCAAACGTAAAGGATGTCACGATTTTGGAAAGGATACAAGGAGATGACAGATTGGCGAGTAGTATTCGAAGTTTATGTCTAGAAGATATGTCAACACCTCGTGTAATATTAAGCACGATAGCTCTGGGAGGTCTTCAACAACTTGCAATTCTGATGTGCAACATATCCGAGATAAGGATAGATTGGGAAAGCAAAGAAAGAAGGGAGCTTTCACCAACGGAGATTCTTCCATCTACAGGTTCTCCAGGCTTCAAGCAACTCTCCACTGTTTATATAAACCAGTTGGAAGGGCAAAGGGATTTGTCATGGCTGTTATATGCTCAAAATCTAAAGAAACTAGAAGTGTGCTGGTCACCACAAATAGAAGAAATAATAAATAAGGAGAAAGGAATGAATATTACCAAACTGCATCGAGATATTGTTGTTCCATTTGGGAACCTGGAAGACCTTGCGCTACGTCAAATGGCGGACCTCACGGAAATTTGCTGGAATTATCGGACTCTCCCTAACCTTAGAAAATCATATATCAACGATTGTCCAAAGCTACCTGAAGATATTTTCGTGCCTCTGCTTCCTGAAAAGAGTCCTTCACGTTTTTTTTTCTTTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein | disease resistance protein [Arabidopsis thaliana]. | MLGWLVIPWNQIFTAACGCFLSDRNYIHMMESNLDALQKTMEELKNGRDDLLGRVSIEEDKGLQRLAQVNGWLSRVQIVESEFKDLLEAMSIETGRLCLLGYCSEDCISSYNYGEKVSKMLEEVKELLSKKDFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLLIECELTDNVKMHDVIREMALWINSDFGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCTQIKKISCRSKCPNLSTLLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLPNLQVLKFFYSCVYVDDILMKELQDLEHLKILTANVKDVTILERIQGDDRLASSIRSLCLEDMSTPRVILSTIALGGLQQLAILMCNISEIRIDWESKERRELSPTEILPSTGSPGFKQLSTVYINQLEGQRDLSWLLYAQNLKKLEVCWSPQIEEIINKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICWNYRTLPNLRKSYINDCPKLPEDIFVPLLPEKSPSRFFFF |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 5-846 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LVIPWNQIFTAACGCFLSDRNYIHMMESNLDALQKTMEELKNGRDDLLGRVSIEEDKGLQRLAQVNGWLSRVQIVESEFKDLLEAMSIETGRLCLLGYCSEDCISSYNYGEKVSKMLEEVKELLSKKDFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLLIECELTDNVKMHDVIREMALWINSDFGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCTQIKKISCRSKCPNLSTLLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLPNLQVLKFFYSCVYVDDILMKELQDLEHLKILTANVKDVTILERIQGDDRLASSIRSLCLEDMSTPRVILSTIALGGLQQLAILMCNISEIRIDWESKERRELSPTEILPSTGSPGFKQLSTVYINQLEGQRDLSWLLYAQNLKKLEVCWSPQIEEIINKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICWNYRTLPNLRKSYINDCPKLPEDI |
| HMMPanther: PTHR23155:SF115 | 5-846 | PTHR23155:SF115,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | LVIPWNQIFTAACGCFLSDRNYIHMMESNLDALQKTMEELKNGRDDLLGRVSIEEDKGLQRLAQVNGWLSRVQIVESEFKDLLEAMSIETGRLCLLGYCSEDCISSYNYGEKVSKMLEEVKELLSKKDFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLLIECELTDNVKMHDVIREMALWINSDFGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCTQIKKISCRSKCPNLSTLLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLPNLQVLKFFYSCVYVDDILMKELQDLEHLKILTANVKDVTILERIQGDDRLASSIRSLCLEDMSTPRVILSTIALGGLQQLAILMCNISEIRIDWESKERRELSPTEILPSTGSPGFKQLSTVYINQLEGQRDLSWLLYAQNLKKLEVCWSPQIEEIINKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICWNYRTLPNLRKSYINDCPKLPEDI |
| superfamily: SSF52540 | 134-367 | SSF52540 | RMVAQEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSH |
| Gene3D: G3DSA:3.40.50.300 | 138-261 | G3DSA:3.40.50.300 | QEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDL |
| HMMPfam: PF00931 IPR002182
|
157-436 | NB-ARC,NBS NB-ARC
|
KLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKASLIYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPN |
| FPrintScan: PR00364 IPR000767
|
173-188 | DISEASERSIST Disease resistance protein
|
TLGLYGMGGVGKTTLL |
| FPrintScan: PR00364 IPR000767
|
248-262 | DISEASERSIST Disease resistance protein
|
NLERKKFVLLLDDLW |
| FPrintScan: PR00364 IPR000767
|
342-356 | DISEASERSIST Disease resistance protein
|
CHGLPLALNVIGKAM |
| superfamily: SSF52058 | 484-842 | SSF52058,LRR | DFGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCTQIKKISCRSKCPNLSTLLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLPNLQVLKFFYSCVYVDDILMKELQDLEHLKILTANVKDVTILERIQGDDRLASSIRSLCLEDMSTPRVILSTIALGGLQQLAILMCNISEIRIDWESKERRELSPTEILPSTGSPGFKQLSTVYINQLEGQRDLSWLLYAQNLKKLEVCWSPQIEEIINKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICWNYRTLPNLRKSYINDCPKL |
| Gene3D: G3DSA:3.80.10.10 | 510-653 | G3DSA:3.80.10.10 | EIVRTMSFTCTQIKKISCRSKCPNLSTLLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLPNLQVLKFFYSCVYVDDILMKELQDL |
| FPrintScan: PR00364 IPR000767
|
554-570 | DISEASERSIST Disease resistance protein
|
RFMPKLVVLDLSANLDL |
| Gene3D: G3DSA:3.80.10.10 | 768-840 | G3DSA:3.80.10.10 | QNLKKLEVCWSPQIEEIINKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICWNYRTLPNLRKSYINDCP |
List of Contributions
There has not been any contribution yet.
