PRGDB00044930 (At4g14370)

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At4g14370
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 108740086 (DQ527821)
Gene Class Unknown
Domain Type LRR, LRR, LRR
Gene Species Arabidopsis thaliana

Comment?

Arabidopsis thaliana ecotype Uod-1 disease resistance protein (At4g14370) gene, partial cds.

DNA Sequence

CACCTCATCTACGGTTACTTCGCTGGGAAGCATACCCAAGTAATGCTCTTCCTACTACATTTCATCCAGAATATCTTGTAGAACTTGATTTGAAGGAGAGCCAGCTTGAGAAGCTTTGGCAAGGAACACAGCCACTTACAAATCTCAAGAAAATGGATTTGACACGATCCTCTCATTTGAAGGAACTTCCAGATCTTTCAAATGCTACAAATCTCGAGAGGTTGGAGCTGAGTTATTGCAAGAGTTTGGTAGAGATTCCTTCCTCTTTTTCGGAACTTCGAAAACTAGAGACGTTGGTAATACACAACTGCACAAAGCTAGAAGTTGTTCCAACTCTCATCAACTTGGCATCTCTTGATTTCTTCAACATGCATGGTTGCTCCCAACTGAAAAAATTTCCAGGTATTTCTACACACATCTCAAGACTCGTTATAGATGACACACTGGTAGAAGAACTTCCTACATCAATAATACTTTGCACTCGGCTTAGAACTCTCATGATAAGCGGCAGTGGAAACTTTAAGACATTAACATATCTCCCTCTGAGTCTAACGTATCTAGACCTAAGGTGTAC


Protein sequences

Name Description Sequence
disease resistance protein disease resistance protein [Arabidopsis thaliana].

PHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCT

Domains

Domain Start-End Description Sequence

superfamily: SSF52058
1-190 SSF52058,LRR

PHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRC

Gene3D: G3DSA:3.80.10.10
2-189 G3DSA:3.80.10.10

HLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLR

HMMPanther: PTHR11017
3-191 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

LRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCT

HMMPanther: PTHR11017:SF20
3-191 PTHR11017:SF20,SUBFAMILY NOT NAMED

LRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCT

HMMPfam: PF07725
IPR011713
24-43 LRR_3
Leucine-rich repeat 3

YLVELDLKESQLEKLWQGTQ

HMMPfam: PF13855
69-126 LRR_8,Leucine rich repeat

TNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGC


List of References



List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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